CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plasma membrane 5
extracellular 8
endoplasmic reticulum 5
golgi 5
vacuole 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY59805	Canola	extracellular	75.48	66.53
Bra037084.1-P	Field mustard	extracellular	72.12	57.47
CDY22735	Canola	extracellular	63.46	55.93
CDY47794	Canola	extracellular	59.62	55.86
VIT_03s0017g02260.t01	Wine grape	extracellular	49.04	52.31
CDY09061	Canola	extracellular	63.46	51.56
TraesCS7D01G020100.1	Wheat	cytosol, plastid	25.0	46.85
CDY22936	Canola	plasma membrane	65.38	46.74
GSMUA_Achr2P01500_001	Banana	endoplasmic reticulum, extracellular	34.62	46.45
AT4G15160.1	Thale cress	extracellular	60.1	45.45
TraesCS2B01G444500.1	Wheat	extracellular	34.13	43.29
TraesCS2D01G422700.1	Wheat	extracellular	33.65	42.68
TraesCS2A01G424800.1	Wheat	extracellular	33.65	42.68
VIT_03s0017g02200.t01	Wine grape	extracellular	41.83	41.63
TraesCS7A01G024100.1	Wheat	plastid	28.85	40.27
Zm00001d002347_P001	Maize	extracellular	27.88	40.0
TraesCS7D01G020000.1	Wheat	plastid	26.44	38.73
OQU82307	Sorghum	extracellular, plasma membrane	27.4	38.51
Os04t0612500-01	Rice	endoplasmic reticulum, plasma membrane, vacuole	15.87	37.08
Zm00001d026282_P001	Maize	extracellular	28.37	36.65
Os06t0168700-01	Rice	plastid	41.83	35.37
TraesCS2D01G422800.1	Wheat	extracellular, plastid	32.69	34.87
HORVU2Hr1G099450.1	Barley	endoplasmic reticulum	31.25	33.85
CDY39502	Canola	extracellular	41.83	32.22
KRG90032	Soybean	extracellular	50.48	32.01
CDY19310	Canola	extracellular	40.38	31.11
CDY12951	Canola	extracellular	40.38	30.43
TraesCS7A01G024200.1	Wheat	plastid	32.21	30.18
HORVU7Hr1G027440.2	Barley	extracellular	40.38	29.68
CDX81428	Canola	endoplasmic reticulum, plasma membrane	36.06	29.3
CDY70376	Canola	extracellular	39.42	28.67
CDY18576	Canola	endoplasmic reticulum, plasma membrane	36.54	27.14
EER89284	Sorghum	endoplasmic reticulum, vacuole	40.87	26.23
KRH17654	Soybean	extracellular	48.08	26.04
PGSC0003DMT400035207	Potato	extracellular	47.6	25.38
TraesCS7B01G031800.1	Wheat	extracellular	37.5	24.3
HORVU2Hr1G099370.2	Barley	mitochondrion	27.88	21.48
HORVU2Hr1G099470.5	Barley	extracellular	33.65	14.77

Protein Annotations

EnsemblPlants:CDY06505	EnsemblPlantsGene:GSBRNA2T00122606001	Gene3D:1.10.110.10	InterPro:Bifun_inhib/LTP/seed_sf	InterPro:Hydrophob_seed	PANTHER:PTHR31731
PANTHER:PTHR31731:SF52	PFAM:PF14547	PRINTS:PR01217	ProteinID:CDY06505	ProteinID:CDY06505.1	SEG:seg
SignalP:SignalP-noTM	SUPFAM:SSF47699	TMHMM:TMhelix	UniParc:UPI0004EE2693	MapMan:35.1	:

Description

BnaC06g11390D

Coordinates

chrLK031970:+:960858..962844

Molecular Weight (calculated)

21823.0 Da

IEP (calculated)

8.768

GRAVY (calculated)

0.106

Length

208 amino acids

Sequence
(BLAST)

001: MGFLHNQYLS FVILLLFGFL AISYACECTT ATTNPILPTT VRQTTATSNP FAPTTVRQAT TTSNPFAPTT PPPPPTPSPP PPYVKPPPPP TPSPPPPPTP
101: CPPPPPAPTP KPKTCSINVL KLSACVDVLG GLIHIGLGKG YAKTKCCPVL DGLVGLDAAV CLCSSIRAKL LNIDLLIPIA LELLIDCGKT PPRNFKCPAP
201: QQRNPLLG

Best Arabidopsis Sequence Match ( AT4G15160.2 )
(BLAST)

001: MALLHKQNIS FVILLLLGLL AVSYACDCSD PPKPSPHPPP PPPTPYTPPP PTPYTPPPPT VKPPPPPVVT PPPPTPTPEA PCPPPPPTPY PPPPKPETCP
101: IDALKLGACV DVLGGLIHIG LGKSYAKAKC CPLLDDLVGL DAAVCLCTTI RAKLLNIDLI IPIALEVLVD CGKTPPPRGF KCPTPLKRTP LLG

Arabidopsis Description

Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JJE3]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.