CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plasma membrane 6
extracellular 7
endoplasmic reticulum 5
golgi 5
vacuole 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra038089.1-P	Field mustard	extracellular	98.44	98.44
CDY22735	Canola	extracellular	85.16	92.37
CDY22936	Canola	plasma membrane	77.34	68.04
CDY59805	Canola	extracellular	58.98	63.98
CDY06505	Canola	extracellular	51.56	63.46
CDY47794	Canola	extracellular	51.56	59.46
AT4G15160.1	Thale cress	extracellular	61.72	57.45
VIT_03s0017g02260.t01	Wine grape	extracellular	42.97	56.41
TraesCS7D01G020100.1	Wheat	cytosol, plastid	23.05	53.15
VIT_03s0017g02200.t01	Wine grape	extracellular	40.62	49.76
GSMUA_Achr2P01500_001	Banana	endoplasmic reticulum, extracellular	29.69	49.03
TraesCS2B01G444500.1	Wheat	extracellular	30.86	48.17
TraesCS2D01G422700.1	Wheat	extracellular	30.47	47.56
TraesCS2A01G424800.1	Wheat	extracellular	30.08	46.95
TraesCS7D01G020000.1	Wheat	plastid	24.61	44.37
TraesCS7A01G024100.1	Wheat	plastid	25.39	43.62
TraesCS2D01G422800.1	Wheat	extracellular, plastid	32.81	43.08
Os06t0168700-01	Rice	plastid	40.23	41.87
CDY19310	Canola	extracellular	43.75	41.48
CDY39502	Canola	extracellular	43.36	41.11
Zm00001d026282_P001	Maize	extracellular	25.78	40.99
Zm00001d002347_P001	Maize	extracellular	23.05	40.69
OQU82307	Sorghum	extracellular, plasma membrane	22.66	39.19
HORVU2Hr1G099450.1	Barley	endoplasmic reticulum	28.91	38.54
TraesCS7A01G024200.1	Wheat	plastid	33.2	38.29
KRG90032	Soybean	extracellular	48.05	37.5
CDY12951	Canola	extracellular	40.23	37.32
HORVU7Hr1G027440.2	Barley	extracellular	41.02	37.1
Os04t0612500-01	Rice	endoplasmic reticulum, plasma membrane, vacuole	12.89	37.08
CDX81428	Canola	endoplasmic reticulum, plasma membrane	36.33	36.33
CDY70376	Canola	extracellular	39.84	35.66
KRH17654	Soybean	extracellular	52.73	35.16
CDY18576	Canola	endoplasmic reticulum, plasma membrane	37.11	33.93
PGSC0003DMT400035207	Potato	extracellular	51.17	33.59
EER89284	Sorghum	endoplasmic reticulum, vacuole	39.45	31.17
HORVU2Hr1G099370.2	Barley	mitochondrion	32.03	30.37
TraesCS7B01G031800.1	Wheat	extracellular	37.89	30.22
HORVU2Hr1G099470.5	Barley	extracellular	34.77	18.78

Protein Annotations

Gene3D:1.10.110.10	MapMan:35.1	UniProt:A0A078F6P7	InterPro:Bifun_inhib/LTP/seed_sf	EnsemblPlants:CDY09061	ProteinID:CDY09061
ProteinID:CDY09061.1	EnsemblPlantsGene:GSBRNA2T00001225001	InterPro:Hydrophob_seed	PFAM:PF14547	PRINTS:PR01217	PFscan:PS51257
PANTHER:PTHR31731	PANTHER:PTHR31731:SF52	SUPFAM:SSF47699	SignalP:SignalP-noTM	UniParc:UPI0004EF1770	SEG:seg

Description

BnaC08g10150DBnaC08g10150D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F6P7]

Coordinates

chrLK031992:+:292534..293556

Molecular Weight (calculated)

26912.3 Da

IEP (calculated)

9.077

GRAVY (calculated)

-0.308

Length

256 amino acids

Sequence
(BLAST)

001: MGLLHKQNLS FVILLLGFLV VSYACDCGDP PKPSPHPVKP PKHPVKPPKP PTVKPPPHTP RPPTVKPPHT PFPPHSFPPY TPKPPTVTPP PPYTPSPPPH
101: TPKPPTVKPQ PQPTPTPSPP PPYVKPPPVP TPETPCPPPP PPSPPPTPCP PTPPAPTPEP ETCSIDAHKL GACVDVLGGL IHIGLGKSYA KATCCPVLGG
201: LVGLDAAVCL CTTIRAKLLN IDLIIPIALE LLVDCGKTPP RDFKCPAPQR KSPLLG

Best Arabidopsis Sequence Match ( AT3G22120.2 )
(BLAST)

001: MYLLTHSFQK PKPSFQKMGS RSQNLSFLVL LLLGFVAVSY ACDCTPPKPS PAPHKPPKHP VKPPKPPAVK PPKPPAVKPP TPKPPTVKPH PKPPTVKPHP
101: KPPTVKPHPK PPTVKPPHPK PPTKPHPHPK PPIVKPPTKP PPSTPKPPTK PPPSTPKPPT TKPPPSTPKP PHHKPPPTPC PPPTPTPTPP VVTPPTPTPP
201: VITPPTPTPP VVTPPTPTPP VITPPTPTPP VITPPTPTPP VVTPPTPTPP VVTPPTPTPP TPIPETCPID TLKLGACVDV LGGLIHIGLG KSHAKAECCP
301: VLGGLLDLDA AVCLCTTIKL KLLNIDLVLP IALELLLDCG KTPPSDFKCP A

Arabidopsis Description

CWLPCell wall-plasma membrane linker protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSA3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.