Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026639.1-P | Field mustard | cytosol | 97.44 | 97.44 |
| CDY66640 | Canola | cytosol | 88.18 | 90.2 |
| AT2G01710.2 | Thale cress | mitochondrion | 71.57 | 63.1 |
| KRH62217 | Soybean | cytosol, nucleus | 43.77 | 55.69 |
| VIT_18s0001g07450.t01 | Wine grape | cytosol | 50.8 | 50.0 |
| KRH72458 | Soybean | nucleus | 49.84 | 44.83 |
| KRH16845 | Soybean | nucleus | 48.24 | 41.48 |
| PGSC0003DMT400024179 | Potato | cytosol | 45.05 | 37.8 |
| Solyc04g076270.1.1 | Tomato | nucleus | 44.73 | 37.63 |
| CDY69792 | Canola | cytosol | 31.63 | 33.79 |
| CDY21586 | Canola | cytosol | 30.35 | 32.87 |
| CDY31322 | Canola | cytosol | 34.5 | 28.95 |
| CDX84519 | Canola | nucleus | 35.46 | 23.37 |
| CDY58269 | Canola | nucleus | 35.46 | 22.11 |
| CDY46799 | Canola | nucleus | 19.17 | 15.31 |
| CDY45966 | Canola | nucleus | 34.5 | 14.52 |
| CDY45473 | Canola | nucleus | 34.19 | 14.3 |
Protein Annotations
| Gene3D:1.10.287.110 | MapMan:12.5.1.16.2 | UniProt:A0A078FBV0 | EnsemblPlants:CDY09423 | ProteinID:CDY09423 | ProteinID:CDY09423.1 |
| InterPro:DnaJ_domain | EnsemblPlantsGene:GSBRNA2T00030916001 | InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf | PFAM:PF00226 |
| PFscan:PS50076 | PANTHER:PTHR45496 | SMART:SM00271 | SUPFAM:SSF46565 | UniParc:UPI0004EE9E29 | SEG:seg |
Description
BnaA02g25870DBnaA02g25870D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FBV0]
Coordinates
chrLK031995:-:822078..823265
Molecular Weight (calculated)
34520.7 Da
IEP (calculated)
7.722
GRAVY (calculated)
-0.570
Length
313 amino acids
Sequence
(BLAST)
(BLAST)
001: MGENTNRSEA ERLLGISEKL LESRDLNGSK EFAILAQETE PLLEGTDQIL AVVDVLLASA ADNRINNQPN WYKILQIEDP DQSSADADLI KKQYRRLALL
101: LHPDKNRLPY ADQAFRFVVD AWEVLSTASK KSQFDLVFTK VDLGGGRSKK KGTSERMSTF WTACPYCYAL HEYPRVYQEY CIRCQNCQRA FHAASVPQLP
201: PLVPGKDEYY CCWGFFPMGF VGGKGGEEAA GDTTKFPNWM PPVFGQNGGV VTPTEPGPNV NGAGSSRGVP ISFDGWSSGS GKRDAEAVRN DNGGVNSDGM
301: PKKRGRGRPK KNV
101: LHPDKNRLPY ADQAFRFVVD AWEVLSTASK KSQFDLVFTK VDLGGGRSKK KGTSERMSTF WTACPYCYAL HEYPRVYQEY CIRCQNCQRA FHAASVPQLP
201: PLVPGKDEYY CCWGFFPMGF VGGKGGEEAA GDTTKFPNWM PPVFGQNGGV VTPTEPGPNV NGAGSSRGVP ISFDGWSSGS GKRDAEAVRN DNGGVNSDGM
301: PKKRGRGRPK KNV
001: MLLFFFPRPF LHTANQSLVS SSLVEAIIFR SAHHFSAIAD GRRKMGDNNP NRSEAERLLG IAEKLLESRD LNGSKEFAIL AQETEPLLEG TDQILAVVDV
101: LLSSAPENRI KNQPNWYKIL QIEDLTESST DNDLIKKQYR RLALLLHPDK NRFPFADQAF RFVLDAWEVL STPTKKSQFD GDLNLIFTKV NLNTQKSKKK
201: TTTNEKMSTF WTACPYCYSL HEYPRVYQEY CIRCQNCQRA FHAASIPQLP PLIPGKDEYY CCWGFFPMGF VGGKGGEAAI ANGVDAAKFP NWMPPVFSSG
301: GVAAPPSGNG VSFDGWSGGA AKRDNEAVRS NNGVGVNSDG TPKKRGRGRP KKNPV
101: LLSSAPENRI KNQPNWYKIL QIEDLTESST DNDLIKKQYR RLALLLHPDK NRFPFADQAF RFVLDAWEVL STPTKKSQFD GDLNLIFTKV NLNTQKSKKK
201: TTTNEKMSTF WTACPYCYSL HEYPRVYQEY CIRCQNCQRA FHAASIPQLP PLIPGKDEYY CCWGFFPMGF VGGKGGEAAI ANGVDAAKFP NWMPPVFSSG
301: GVAAPPSGNG VSFDGWSGGA AKRDNEAVRS NNGVGVNSDG TPKKRGRGRP KKNPV
Arabidopsis Description
Chaperone DnaJ-domain superfamily protein [Source:TAIR;Acc:AT2G01710]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.