Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plasma membrane 1
- extracellular 1
- endoplasmic reticulum 1
- golgi 1
- vacuole 1
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G73100.1 | CDY21586 | AT5G09540.1 | 21798944 |
| AT1G73100.1 | CDY69792 | AT5G09540.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY61331 | Canola | nucleus | 99.55 | 99.55 |
| CDX68245 | Canola | nucleus | 98.06 | 98.5 |
| CDX96449 | Canola | nucleus | 83.26 | 84.78 |
| CDY59935 | Canola | nucleus | 83.26 | 84.52 |
| AT1G73100.1 | Thale cress | nucleus | 81.76 | 81.76 |
| CDY04931 | Canola | cytosol, extracellular, nucleus | 7.62 | 67.11 |
| CDX80930 | Canola | nucleus | 58.15 | 60.4 |
| CDY11319 | Canola | nucleus | 57.7 | 59.84 |
| CDX98805 | Canola | nucleus | 55.9 | 57.1 |
| CDX98804 | Canola | nucleus | 52.02 | 56.77 |
| CDY14135 | Canola | nucleus | 55.75 | 51.66 |
| Os12t0128450-00 | Rice | nucleus | 39.61 | 43.16 |
| Os11t0131600-00 | Rice | nucleus | 42.15 | 42.47 |
| EES19725 | Sorghum | nucleus | 42.75 | 42.43 |
| Zm00001d010646_P001 | Maize | plastid | 41.26 | 42.33 |
| TraesCS1A01G362000.1 | Wheat | nucleus | 42.75 | 42.31 |
| GSMUA_Achr5P27620_001 | Banana | nucleus | 39.01 | 42.23 |
| TraesCS1B01G378900.1 | Wheat | nucleus | 42.45 | 42.14 |
| TraesCS1D01G366800.1 | Wheat | nucleus | 42.45 | 42.01 |
| Zm00001d038541_P002 | Maize | nucleus | 43.2 | 41.76 |
| TraesCS1D01G307700.1 | Wheat | nucleus | 41.85 | 41.54 |
| TraesCS4B01G280000.1 | Wheat | nucleus | 44.84 | 41.38 |
| TraesCS1B01G319000.1 | Wheat | nucleus | 41.55 | 41.25 |
| Os05t0490700-01 | Rice | extracellular | 41.41 | 41.22 |
| CDY26218 | Canola | nucleus | 42.9 | 41.12 |
| TraesCS1A01G308300.1 | Wheat | nucleus | 41.41 | 41.1 |
| CDY66122 | Canola | nucleus | 43.35 | 40.62 |
| TraesCS5A01G140500.1 | Wheat | nucleus | 39.76 | 39.0 |
| TraesCS5D01G152000.1 | Wheat | nucleus | 40.06 | 38.95 |
| CDX70182 | Canola | nucleus | 58.89 | 38.93 |
| CDY56214 | Canola | nucleus | 45.89 | 38.71 |
| EES01635 | Sorghum | nucleus | 42.45 | 38.27 |
| TraesCS4D01G278500.1 | Wheat | nucleus | 46.79 | 38.22 |
| Os11t0602200-01 | Rice | nucleus | 45.89 | 37.76 |
| TraesCS3A01G385200.1 | Wheat | plastid | 40.96 | 37.74 |
| TraesCS5B01G138800.1 | Wheat | nucleus | 39.76 | 37.46 |
| TraesCS3B01G367200.1 | Wheat | nucleus | 41.55 | 37.42 |
| TraesCS3B01G366900.1 | Wheat | nucleus | 41.55 | 37.42 |
| TraesCS4A01G023500.1 | Wheat | nucleus | 46.64 | 37.41 |
| Os01t0811300-01 | Rice | nucleus, plasma membrane | 41.11 | 37.36 |
| TraesCS3A01G336100.1 | Wheat | nucleus | 41.55 | 37.32 |
| TraesCS3D01G329100.1 | Wheat | nucleus | 41.26 | 37.15 |
| EES10399 | Sorghum | nucleus | 45.29 | 37.0 |
| EER96081 | Sorghum | nucleus | 45.89 | 36.99 |
| Zm00001d041005_P001 | Maize | nucleus | 38.42 | 36.77 |
| OQU78645 | Sorghum | nucleus | 40.96 | 36.73 |
| Zm00001d019195_P001 | Maize | nucleus | 46.04 | 35.98 |
| Zm00001d043135_P003 | Maize | nucleus | 41.55 | 35.69 |
| TraesCS3B01G417400.1 | Wheat | nucleus | 44.1 | 35.41 |
| CDY28970 | Canola | cytosol | 12.86 | 34.4 |
| TraesCS3D01G378200.1 | Wheat | plastid | 34.68 | 33.87 |
| CDY40566 | Canola | cytosol, plastid | 13.75 | 32.51 |
| CDY26221 | Canola | nucleus | 43.05 | 32.18 |
| CDY19475 | Canola | nucleus | 26.01 | 31.52 |
| CDY17156 | Canola | nucleus | 26.46 | 31.27 |
| CDX78210 | Canola | nucleus | 29.15 | 30.9 |
| CDX73506 | Canola | nucleus | 29.0 | 30.65 |
| CDX78549 | Canola | nucleus | 26.91 | 29.8 |
| CDX70530 | Canola | nucleus | 26.61 | 29.52 |
| CDY23755 | Canola | nucleus | 27.95 | 29.36 |
| CDY31670 | Canola | nucleus | 31.24 | 29.15 |
| CDX84255 | Canola | nucleus | 31.39 | 29.13 |
| CDY37735 | Canola | nucleus, plastid | 27.5 | 28.89 |
| CDY40567 | Canola | mitochondrion | 12.86 | 26.79 |
| CDY50660 | Canola | nucleus | 13.45 | 26.79 |
| CDY25627 | Canola | nucleus | 29.75 | 26.68 |
| CDX89510 | Canola | nucleus | 30.19 | 26.65 |
| CDX77744 | Canola | cytosol | 13.0 | 26.2 |
| CDY33517 | Canola | cytosol, mitochondrion, nucleus | 13.0 | 26.2 |
| CDY51752 | Canola | nucleus | 13.0 | 25.89 |
| CDY33518 | Canola | nucleus | 13.6 | 25.0 |
| CDY28971 | Canola | mitochondrion | 12.71 | 24.85 |
| CDX77745 | Canola | nucleus | 13.3 | 23.12 |
| CDX74192 | Canola | nucleus | 15.1 | 21.63 |
| CDX92067 | Canola | nucleus | 15.1 | 21.4 |
| CDY49341 | Canola | nucleus | 14.8 | 17.77 |
| CDY01852 | Canola | plasma membrane | 46.49 | 16.76 |
| CDY14903 | Canola | nucleus | 14.35 | 15.0 |
| CDX94744 | Canola | nucleus | 14.35 | 14.01 |
| CDY22319 | Canola | nucleus | 14.5 | 13.76 |
| CDY42922 | Canola | plasma membrane, vacuole | 16.74 | 13.53 |
| CDX96935 | Canola | nucleus | 15.1 | 12.88 |
| CDY46064 | Canola | nucleus | 9.27 | 12.6 |
| CDY62521 | Canola | nucleus | 17.94 | 8.78 |
| CDY39668 | Canola | nucleus | 17.94 | 8.78 |
| CDX86631 | Canola | cytosol | 0.15 | 1.23 |
| CDY49340 | Canola | cytosol | 0.15 | 1.23 |
| CDY21127 | Canola | cytosol | 0.15 | 1.23 |
| CDX89821 | Canola | cytosol | 0.15 | 1.23 |
| HORVU6Hr1G090170.1 | Barley | cytosol | 0.15 | 0.8 |
| CDY18235 | Canola | mitochondrion | 0.15 | 0.71 |
| CDY53193 | Canola | mitochondrion | 0.15 | 0.71 |
| CDY15508 | Canola | mitochondrion | 0.15 | 0.71 |
| CDX74191 | Canola | mitochondrion | 0.15 | 0.71 |
| CDX92068 | Canola | mitochondrion | 0.15 | 0.71 |
| CDY42923 | Canola | mitochondrion | 0.15 | 0.71 |
Protein Annotations
| KEGG:00310+2.1.1.43 | MapMan:12.3.3.7 | MapMan:12.5.1.16.1 | Gene3D:2.170.270.10 | Gene3D:2.30.280.10 | GO:A0A078FDW7 |
| UniProt:A0A078FDW7 | EnsemblPlants:CDY11129 | ProteinID:CDY11129 | ProteinID:CDY11129.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005694 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0008270 |
| GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016571 | GO:GO:0016740 | GO:GO:0018024 | GO:GO:0019538 |
| GO:GO:0032259 | GO:GO:0034968 | EnsemblPlantsGene:GSBRNA2T00049116001 | InterPro:Hist-Lys_N-MeTrfase_plant | InterPro:IPR001214 | InterPro:IPR003105 |
| InterPro:IPR003616 | InterPro:IPR007728 | InterPro:IPR025794 | InterPro:IPR036987 | PFAM:PF00856 | PFAM:PF02182 |
| PFAM:PF05033 | PFscan:PS50280 | PFscan:PS50867 | PFscan:PS50868 | PFscan:PS51015 | PFscan:PS51575 |
| PANTHER:PTHR22884 | PANTHER:PTHR22884:SF415 | InterPro:PUA-like_sf | InterPro:Post-SET_dom | InterPro:Pre-SET_dom | InterPro:SET_dom |
| SMART:SM00317 | SMART:SM00466 | SMART:SM00468 | InterPro:SRA-YDG_sf | InterPro:SRA_YDG | SUPFAM:SSF82199 |
| SUPFAM:SSF88697 | UniParc:UPI0004EE17D6 | SEG:seg | : | : | : |
Description
BnaC06g23810DBnaC06g23810D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FDW7]
Coordinates
chrLK032009:-:508686..511897
Molecular Weight (calculated)
73285.8 Da
IEP (calculated)
8.084
GRAVY (calculated)
-0.465
Length
669 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGVPNPNHY DKSIVLDVKP LRSLRPVFPN GNQGPPFVGV PPFGPSSSSS TGYSPFFPFG SQPPTQDTPD LNQTQYTPPP SFVPPLQSYR SPTTTASNGP
101: SSSTGAKRGR PKGSGNAKKK DKTVPQEPTL DVQVVKRFSG VFDSGISAAE REDGNVDLVS TVLMRFDAVR RRLSQVEYAK AATAKAAGSL MSNGVRTNMK
201: KRVGTVPGIE VGDIFFSRIE MCLVGLHMQT MAGIDYITSK AAGADEEPLA TSIVSAGRYD GEAQDPESLI YSGQGGNADK NKQASDQKLE RGNLALERSL
301: RKGNGVRVIR GEEDPASKTG KIYIYDGLYT ISESWVEKGK SGCNTFKYRL VRVPGQPPAF GFWKAVHKWK EGLMTPRRGL ILPDITSGVE SKPVSLVNDF
401: DDEKGPSYFT YISTLKHSEA FRIPQQHTAT GCSCRGLCAP GDLNCSCIRM NGGDLPYLNG VMLVSRRPMV YECGSTCPCN PSCKNKVIQT GLKFRMEVFK
501: TANRGWGLRS WDPIRAGSFI CEYAGEVKDQ ETLRMDQEED EYVFDTSRVY NSFKWNYEPA LVDEDPSDEL PEEFNLPAPL LISAKNFGNV ARFMNHSCSP
601: NVLWQPVICE GNGEPVVHIA FFAIRHIPPM AELTYDYGVS LPSEARDGSL LHGKRQCNCG SVKCRGSFG
101: SSSTGAKRGR PKGSGNAKKK DKTVPQEPTL DVQVVKRFSG VFDSGISAAE REDGNVDLVS TVLMRFDAVR RRLSQVEYAK AATAKAAGSL MSNGVRTNMK
201: KRVGTVPGIE VGDIFFSRIE MCLVGLHMQT MAGIDYITSK AAGADEEPLA TSIVSAGRYD GEAQDPESLI YSGQGGNADK NKQASDQKLE RGNLALERSL
301: RKGNGVRVIR GEEDPASKTG KIYIYDGLYT ISESWVEKGK SGCNTFKYRL VRVPGQPPAF GFWKAVHKWK EGLMTPRRGL ILPDITSGVE SKPVSLVNDF
401: DDEKGPSYFT YISTLKHSEA FRIPQQHTAT GCSCRGLCAP GDLNCSCIRM NGGDLPYLNG VMLVSRRPMV YECGSTCPCN PSCKNKVIQT GLKFRMEVFK
501: TANRGWGLRS WDPIRAGSFI CEYAGEVKDQ ETLRMDQEED EYVFDTSRVY NSFKWNYEPA LVDEDPSDEL PEEFNLPAPL LISAKNFGNV ARFMNHSCSP
601: NVLWQPVICE GNGEPVVHIA FFAIRHIPPM AELTYDYGVS LPSEARDGSL LHGKRQCNCG SVKCRGSFG
001: MQGVPGFNTV PNPNHYDKSI VLDIKPLRSL KPVFPNGNQG PPFVGCPPFG PSSSEYSSFF PFGAQQPTHD TPDLNQTQNT PIPSFVPPLR SYRTPTKTNG
101: PSSSSGTKRG VGRPKGTTSV KKKEKKTVAN EPNLDVQVVK KFSSDFDSGI SAAEREDGNA YLVSSVLMRF DAVRRRLSQV EFTKSATSKA AGTLMSNGVR
201: TNMKKRVGTV PGIEVGDIFF SRIEMCLVGL HMQTMAGIDY IISKAGSDEE SLATSIVSSG RYEGEAQDPE SLIYSGQGGN ADKNRQASDQ KLERGNLALE
301: NSLRKGNGVR VVRGEEDAAS KTGKIYIYDG LYSISESWVE KGKSGCNTFK YKLVRQPGQP PAFGFWKSVQ KWKEGLTTRP GLILPDLTSG AESKPVSLVN
401: DVDEDKGPAY FTYTSSLKYS ETFKLTQPVI GCSCSGSCSP GNHNCSCIRK NDGDLPYLNG VILVSRRPVI YECGPTCPCH ASCKNRVIQT GLKSRLEVFK
501: TRNRGWGLRS WDSLRAGSFI CEYAGEVKDN GNLRGNQEED AYVFDTSRVF NSFKWNYEPE LVDEDPSTEV PEEFNLPSPL LISAKKFGNV ARFMNHSCSP
601: NVFWQPVIRE GNGESVIHIA FFAMRHIPPM AELTYDYGIS PTSEARDESL LHGQRTCLCG SEQCRGSFG
101: PSSSSGTKRG VGRPKGTTSV KKKEKKTVAN EPNLDVQVVK KFSSDFDSGI SAAEREDGNA YLVSSVLMRF DAVRRRLSQV EFTKSATSKA AGTLMSNGVR
201: TNMKKRVGTV PGIEVGDIFF SRIEMCLVGL HMQTMAGIDY IISKAGSDEE SLATSIVSSG RYEGEAQDPE SLIYSGQGGN ADKNRQASDQ KLERGNLALE
301: NSLRKGNGVR VVRGEEDAAS KTGKIYIYDG LYSISESWVE KGKSGCNTFK YKLVRQPGQP PAFGFWKSVQ KWKEGLTTRP GLILPDLTSG AESKPVSLVN
401: DVDEDKGPAY FTYTSSLKYS ETFKLTQPVI GCSCSGSCSP GNHNCSCIRK NDGDLPYLNG VILVSRRPVI YECGPTCPCH ASCKNRVIQT GLKSRLEVFK
501: TRNRGWGLRS WDSLRAGSFI CEYAGEVKDN GNLRGNQEED AYVFDTSRVF NSFKWNYEPE LVDEDPSTEV PEEFNLPSPL LISAKKFGNV ARFMNHSCSP
601: NVFWQPVIRE GNGESVIHIA FFAMRHIPPM AELTYDYGIS PTSEARDESL LHGQRTCLCG SEQCRGSFG
Arabidopsis Description
SUVH3Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5P4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.