CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra028776.1-P	Field mustard	nucleus	83.8	95.28
CDY04931	Canola	cytosol, extracellular, nucleus	9.83	93.42
CDY11319	Canola	nucleus	69.53	77.83
CDX80930	Canola	nucleus	68.7	77.02
CDX98804	Canola	nucleus	63.85	75.2
AT5G04940.2	Thale cress	nucleus	68.7	74.03
CDX98805	Canola	nucleus	65.79	72.52
CDX96449	Canola	nucleus	52.08	57.23
CDX68245	Canola	nucleus	51.94	56.31
CDY59935	Canola	nucleus	51.25	56.15
CDY11129	Canola	nucleus	51.66	55.75
CDY61331	Canola	nucleus	51.52	55.61
CDX70182	Canola	nucleus	73.68	52.57
GSMUA_Achr5P27620_001	Banana	nucleus	36.7	42.88
Zm00001d010646_P001	Maize	plastid	38.09	42.18
EES19725	Sorghum	nucleus	38.92	41.69
TraesCS1B01G378900.1	Wheat	nucleus	38.78	41.54
Os12t0128450-00	Rice	nucleus	35.32	41.53
Os05t0490700-01	Rice	extracellular	38.64	41.52
TraesCS1D01G366800.1	Wheat	nucleus	38.78	41.42
TraesCS1A01G362000.1	Wheat	nucleus	38.5	41.12
Zm00001d038541_P002	Maize	nucleus	39.2	40.9
Os11t0131600-00	Rice	nucleus	37.4	40.66
TraesCS1D01G307700.1	Wheat	nucleus	37.81	40.5
TraesCS1B01G319000.1	Wheat	nucleus	37.67	40.36
TraesCS1A01G308300.1	Wheat	nucleus	37.4	40.06
TraesCS5A01G140500.1	Wheat	nucleus	37.67	39.88
Zm00001d041005_P001	Maize	nucleus	38.23	39.48
TraesCS4B01G280000.1	Wheat	nucleus	39.47	39.31
TraesCS5D01G152000.1	Wheat	nucleus	37.4	39.24
TraesCS5B01G138800.1	Wheat	nucleus	37.53	38.17
EES01635	Sorghum	nucleus	39.2	38.14
CDY26218	Canola	nucleus	36.57	37.82
Os01t0811300-01	Rice	nucleus, plasma membrane	37.95	37.23
TraesCS3A01G385200.1	Wheat	plastid	37.26	37.05
Os11t0602200-01	Rice	nucleus	41.55	36.9
OQU78645	Sorghum	nucleus	38.09	36.86
CDY66122	Canola	nucleus	36.43	36.83
TraesCS3A01G336100.1	Wheat	nucleus	37.81	36.64
EER96081	Sorghum	nucleus	41.83	36.39
TraesCS4D01G278500.1	Wheat	nucleus	41.14	36.26
TraesCS3B01G367200.1	Wheat	nucleus	37.26	36.2
TraesCS3B01G366900.1	Wheat	nucleus	37.26	36.2
TraesCS3D01G329100.1	Wheat	nucleus	36.98	35.94
TraesCS4A01G023500.1	Wheat	nucleus	41.41	35.85
EES10399	Sorghum	nucleus	40.44	35.65
Zm00001d043135_P003	Maize	nucleus	38.23	35.43
Zm00001d019195_P001	Maize	nucleus	41.97	35.4
TraesCS3B01G417400.1	Wheat	nucleus	40.58	35.17
CDY56214	Canola	nucleus	37.67	34.3
CDY28970	Canola	cytosol	11.77	34.0
TraesCS3D01G378200.1	Wheat	plastid	31.99	33.72
CDY17156	Canola	nucleus	24.93	31.8
CDY40566	Canola	cytosol, plastid	12.33	31.45
CDX78210	Canola	nucleus	27.42	31.38
CDX73506	Canola	nucleus	27.42	31.28
CDY19475	Canola	nucleus	23.55	30.8
CDY23755	Canola	nucleus	26.45	29.98
CDY37735	Canola	nucleus, plastid	25.9	29.36
CDY26221	Canola	nucleus	36.29	29.27
CDY31670	Canola	nucleus	28.25	28.45
CDX84255	Canola	nucleus	28.39	28.43
CDX70530	Canola	nucleus	23.68	28.36
CDX78549	Canola	nucleus	23.55	28.15
CDY25627	Canola	nucleus	28.12	27.21
CDX89510	Canola	nucleus	28.25	26.91
CDY33517	Canola	cytosol, mitochondrion, nucleus	12.33	26.81
CDY40567	Canola	mitochondrion	11.91	26.79
CDX77744	Canola	cytosol	12.19	26.51
CDY50660	Canola	nucleus	12.05	25.89
CDY51752	Canola	nucleus	11.91	25.6
CDY28971	Canola	mitochondrion	11.91	25.15
CDY33518	Canola	nucleus	11.5	22.8
CDX77745	Canola	nucleus	11.36	21.3
CDX74192	Canola	nucleus	12.19	18.84
CDX92067	Canola	nucleus	12.05	18.43
CDY49341	Canola	nucleus	12.47	16.16
CDY01852	Canola	plasma membrane	38.78	15.09
CDY14903	Canola	nucleus	13.02	14.69
CDY22319	Canola	nucleus	13.71	14.04
CDX94744	Canola	nucleus	13.3	14.01
CDX96935	Canola	nucleus	13.43	12.37
CDY42922	Canola	plasma membrane, vacuole	13.99	12.2
CDY46064	Canola	nucleus	8.03	11.79
CDY62521	Canola	nucleus	15.79	8.35
CDY39668	Canola	nucleus	15.65	8.27
CDX86631	Canola	cytosol	0.14	1.23
CDY49340	Canola	cytosol	0.14	1.23
CDX89821	Canola	cytosol	0.14	1.23
CDY21127	Canola	cytosol	0.14	1.23
HORVU6Hr1G090170.1	Barley	cytosol	0.14	0.8
CDY53193	Canola	mitochondrion	0.14	0.71
CDX92068	Canola	mitochondrion	0.14	0.71
CDY15508	Canola	mitochondrion	0.14	0.71
CDY42923	Canola	mitochondrion	0.14	0.71
CDX74191	Canola	mitochondrion	0.14	0.71
CDY18235	Canola	mitochondrion	0.14	0.71

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.7	MapMan:12.5.1.16.1	Gene3D:2.170.270.10	Gene3D:2.30.280.10	GO:A0A078FI82
UniProt:A0A078FI82	EnsemblPlants:CDY14135	ProteinID:CDY14135	ProteinID:CDY14135.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005694	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008270
GO:GO:0009987	GO:GO:0016043	GO:GO:0016571	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538
GO:GO:0032259	GO:GO:0034968	EnsemblPlantsGene:GSBRNA2T00078681001	InterPro:Hist-Lys_N-MeTrfase_plant	InterPro:IPR001214	InterPro:IPR003105
InterPro:IPR003616	InterPro:IPR007728	InterPro:IPR025794	InterPro:IPR036987	PFAM:PF00856	PFAM:PF02182
PFAM:PF05033	PFscan:PS50280	PFscan:PS50867	PFscan:PS50868	PFscan:PS51015	PFscan:PS51575
PANTHER:PTHR22884	PANTHER:PTHR22884:SF415	InterPro:PUA-like_sf	InterPro:Post-SET_dom	InterPro:Pre-SET_dom	InterPro:SET_dom
SMART:SM00317	SMART:SM00466	SMART:SM00468	InterPro:SRA-YDG_sf	InterPro:SRA_YDG	SUPFAM:SSF82199
SUPFAM:SSF88697	UniParc:UPI0004EE51F3	SEG:seg	:	:	:

Description

BnaC02g02520DBnaC02g02520D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FI82]

Coordinates

chrLK032040:+:576423..578878

Molecular Weight (calculated)

80409.6 Da

IEP (calculated)

8.480

GRAVY (calculated)

-0.430

Length

722 amino acids

Sequence
(BLAST)

001: MLRQKKLSGT TTSYTRATTG NRELTKFQKI LPKLETLARF VALSFSFFLC LSHFGNPNLT KRSPSRSSPV FPFLNLVFRR FIAMEESFRS YTDKTRVYDI
101: KPLRTLKPVF PSGNQAPPPF VCSPPFGPFP PGFSPFYPFT YSQPHTQNNS NPSSVTPLRS FRSPNDDEDP PEGSTLKRKT PKKLVRPDNV NFESGITASE
201: RENGNRKLVT SVLTRYEALR RRFSQLEDAR EAVSGINKRA DLKAGSTCMS RGVRTNTKKR LGIVPGVEIG DIFFFRFEMC LVGLHSPSMA GIDYLLLKGE
301: AEEEESITIA TSIVSSGYYD NEEGDPDVLV YTGQGGGNAD KEKQTSDQKL ERGNLALEKS LVRNSPVRVI RGLKEASPSV KIYLYDGLYE VKESWAEKGK
401: LGHNTFKYKL VRAPGQPPAF ATWIGIQKWK GGLPSREGLI LADLSSGVES IGVSLVNEVD DENGPGYFTY STKVTYSESF KLTQPSIGCD CISSCKPGNL
501: NCRCVRRNGG DYPYCGNGVL VSRKGMVYEC SPSCPCLVCK LKVTQVGVKV KLEVFKTVDR GWGLRSWDPI RAGSFICIYA GEAKEKEQTM ENDDYAFDTT
601: RVYTAFKWNY ERGLADEVDS EEVCEEPEMP LPLVVSGKDV GNVARFMNHS CSPNVFWQPV SYEDNGQLFL HVAFFAVSHI PPMTELTYDY GVTRPSGAHN
701: GDTLHGMKKC FCGSEYCKGS FG

Best Arabidopsis Sequence Match ( AT5G04940.1 )
(BLAST)

001: MERNGGHYTD KTRVLDIKPL RTLRPVFPSG NQAPPFVCAP PFGPFPPGFS SFYPFSSSQA NQHTPDLNQA QYPPQHQQPQ NPPPVYQQQP PQHASEPSLV
101: TPLRSFRSPD VSNGNAELEG STVKRRIPKK RPISRPENMN FESGINVADR ENGNRELVLS VLMRFDALRR RFAQLEDAKE AVSGIIKRPD LKSGSTCMGR
201: GVRTNTKKRP GIVPGVEIGD VFFFRFEMCL VGLHSPSMAG IDYLVVKGET EEEPIATSIV SSGYYDNDEG NPDVLIYTGQ GGNADKDKQS SDQKLERGNL
301: ALEKSLRRDS AVRVIRGLKE ASHNAKIYIY DGLYEIKESW VEKGKSGHNT FKYKLVRAPG QPPAFASWTA IQKWKTGVPS RQGLILPDMT SGVESIPVSL
401: VNEVDTDNGP AYFTYSTTVK YSESFKLMQP SFGCDCANLC KPGNLDCHCI RKNGGDFPYT GNGILVSRKP MIYECSPSCP CSTCKNKVTQ MGVKVRLEVF
501: KTANRGWGLR SWDAIRAGSF ICIYVGEAKD KSKVQQTMAN DDYTFDTTNV YNPFKWNYEP GLADEDACEE MSEESEIPLP LIISAKNVGN VARFMNHSCS
601: PNVFWQPVSY ENNSQLFVHV AFFAISHIPP MTELTYDYGV SRPSGTQNGN PLYGKRKCFC GSAYCRGSFG

Arabidopsis Description

SUVH1Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FF80]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.