Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 6
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX89821 | Canola | cytosol | 57.86 | 100.0 |
| CDY53193 | Canola | mitochondrion | 100.0 | 100.0 |
| CDY18235 | Canola | mitochondrion | 99.29 | 99.29 |
| CDX74191 | Canola | mitochondrion | 99.29 | 99.29 |
| CDX92068 | Canola | mitochondrion | 99.29 | 99.29 |
| CDY21127 | Canola | cytosol | 57.14 | 98.77 |
| CDY49340 | Canola | cytosol | 57.14 | 98.77 |
| CDX86631 | Canola | cytosol | 57.14 | 98.77 |
| CDY42923 | Canola | mitochondrion | 98.57 | 98.57 |
| CDY49341 | Canola | nucleus | 14.29 | 3.59 |
| CDY04931 | Canola | cytosol, extracellular, nucleus | 0.71 | 1.32 |
| CDX74192 | Canola | nucleus | 3.57 | 1.07 |
| CDX92067 | Canola | nucleus | 2.86 | 0.85 |
| CDY42922 | Canola | plasma membrane, vacuole | 2.14 | 0.36 |
| CDX80930 | Canola | nucleus | 0.71 | 0.16 |
| CDY11319 | Canola | nucleus | 0.71 | 0.16 |
| CDX98805 | Canola | nucleus | 0.71 | 0.15 |
| CDX96449 | Canola | nucleus | 0.71 | 0.15 |
| CDY59935 | Canola | nucleus | 0.71 | 0.15 |
| CDX68245 | Canola | nucleus | 0.71 | 0.15 |
| CDY61331 | Canola | nucleus | 0.71 | 0.15 |
| CDY11129 | Canola | nucleus | 0.71 | 0.15 |
| CDY14135 | Canola | nucleus | 0.71 | 0.14 |
| CDY56214 | Canola | nucleus | 0.71 | 0.13 |
| CDX70182 | Canola | nucleus | 0.71 | 0.1 |
| CDY01852 | Canola | plasma membrane | 0.71 | 0.05 |
| CDY33517 | Canola | cytosol, mitochondrion, nucleus | 0.0 | 0.0 |
| Os03t0320400-01 | Rice | nucleus | 0.0 | 0.0 |
| CDY40567 | Canola | mitochondrion | 0.0 | 0.0 |
| CDY33518 | Canola | nucleus | 0.0 | 0.0 |
| CDY37735 | Canola | nucleus, plastid | 0.0 | 0.0 |
| CDY40566 | Canola | cytosol, plastid | 0.0 | 0.0 |
| CDY39668 | Canola | nucleus | 0.0 | 0.0 |
| CDY46064 | Canola | nucleus | 0.0 | 0.0 |
| CDY50660 | Canola | nucleus | 0.0 | 0.0 |
| CDY51752 | Canola | nucleus | 0.0 | 0.0 |
| CDY62521 | Canola | nucleus | 0.0 | 0.0 |
| CDY66122 | Canola | nucleus | 0.0 | 0.0 |
| GSMUA_Achr8P23930_001 | Banana | plastid | 0.0 | 0.0 |
| CDX98804 | Canola | nucleus | 0.0 | 0.0 |
| CDX70530 | Canola | nucleus | 0.0 | 0.0 |
| CDX73506 | Canola | nucleus | 0.0 | 0.0 |
| CDX77744 | Canola | cytosol | 0.0 | 0.0 |
| CDX77745 | Canola | nucleus | 0.0 | 0.0 |
| CDX78210 | Canola | nucleus | 0.0 | 0.0 |
| CDX78549 | Canola | nucleus | 0.0 | 0.0 |
| CDX84255 | Canola | nucleus | 0.0 | 0.0 |
| CDX89510 | Canola | nucleus | 0.0 | 0.0 |
| CDX94744 | Canola | nucleus | 0.0 | 0.0 |
| CDX96935 | Canola | nucleus | 0.0 | 0.0 |
| CDY31670 | Canola | nucleus | 0.0 | 0.0 |
| CDY14903 | Canola | nucleus | 0.0 | 0.0 |
| CDY17156 | Canola | nucleus | 0.0 | 0.0 |
| CDY19475 | Canola | nucleus | 0.0 | 0.0 |
| CDY22319 | Canola | nucleus | 0.0 | 0.0 |
| CDY23755 | Canola | nucleus | 0.0 | 0.0 |
| CDY25627 | Canola | nucleus | 0.0 | 0.0 |
| CDY26218 | Canola | nucleus | 0.0 | 0.0 |
| CDY26221 | Canola | nucleus | 0.0 | 0.0 |
| CDY28970 | Canola | cytosol | 0.0 | 0.0 |
| CDY28971 | Canola | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| MapMan:17.1.2.1.23 | Gene3D:2.40.150.20 | GO:A0A078FT90 | UniProt:A0A078FT90 | EnsemblPlants:CDY15508 | ProteinID:CDY15508 |
| ProteinID:CDY15508.1 | ProteinID:CDY53193.1 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0030529 | EnsemblPlantsGene:GSBRNA2T00089678001 |
| InterPro:IPR036853 | HAMAP:MF_01367 | PFAM:PF00238 | ScanProsite:PS00049 | PANTHER:PTHR11761 | PANTHER:PTHR11761:SF8 |
| InterPro:Ribosomal_L14P | InterPro:Ribosomal_L14P_CS | InterPro:Ribosomal_L14_sf | SMART:SM01374 | SUPFAM:SSF50193 | UniParc:UPI0000E6470C |
Description
BnaA08g27920DBnaA08g27920D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FT90]
Coordinates
chrLK032055:+:283353..284664
Molecular Weight (calculated)
15045.7 Da
IEP (calculated)
11.188
GRAVY (calculated)
-0.197
Length
140 amino acids
Sequence
(BLAST)
(BLAST)
001: MSKRGRGGTS GNKFRMSLGL PVAATVNCAD NTGAKNLYII SVKGIKGRLN RLPSACVGDM VMATVKKGKP DLRKKVMPAV IVRQRKPWRR KDGVFMYFED
101: NAGVIVNPKG EMKGSAITGP IGKECADLWP RIASAANAIV
101: NAGVIVNPKG EMKGSAITGP IGKECADLWP RIASAANAIV
001: MSKRGRGGTS GNKFRMSLGL PVAATVNCAD NTGAKNLYII SVKGIKGRLN RLPSACVGDM VMATVKKGKP DLRKKVLPAV IVRQRKPWRR KDGVFMYFED
101: NAGVIVNPKG EMKGSAITGP IGKECADLWP RIASAANAIV
101: NAGVIVNPKG EMKGSAITGP IGKECADLWP RIASAANAIV
Arabidopsis Description
RPL23AAt2g33370 [Source:UniProtKB/TrEMBL;Acc:Q1H559]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.