CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 4
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra005511.1-P	Field mustard	plastid	99.29	91.68
CDY19475	Canola	nucleus	83.57	85.69
CDY37735	Canola	nucleus, plastid	58.13	51.65
CDY23755	Canola	nucleus	57.77	51.33
AT2G33290.2	Thale cress	nucleus	57.42	49.92
CDX73506	Canola	nucleus	50.35	45.02
CDX78210	Canola	nucleus	50.18	45.01
VIT_05s0049g02220.t01	Wine grape	nucleus	51.41	43.3
PGSC0003DMT400075191	Potato	nucleus	49.12	42.12
Solyc12g096990.1.1	Tomato	nucleus	48.76	41.5
Solyc09g090810.1.1	Tomato	nucleus	49.47	40.23
PGSC0003DMT400003956	Potato	nucleus	49.29	40.09
KRH49479	Soybean	nucleus	47.7	38.08
KRG89164	Soybean	nucleus	47.35	37.43
TraesCS2A01G235400.1	Wheat	nucleus	43.99	37.16
TraesCS2D01G240000.1	Wheat	nucleus	43.99	36.89
TraesCS2B01G254700.1	Wheat	nucleus	43.82	36.85
HORVU2Hr1G053260.1	Barley	nucleus	43.82	36.8
GSMUA_Achr5P13120_001	Banana	nucleus	39.22	36.57
Os07t0435900-01	Rice	nucleus	43.99	36.4
GSMUA_Achr4P29270_001	Banana	nucleus	34.45	36.25
KRH07636	Soybean	nucleus	35.87	35.3
GSMUA_Achr1P01130_001	Banana	nucleus	34.28	35.27
EER96294	Sorghum	nucleus	44.17	35.21
Zm00001d005445_P001	Maize	nucleus	34.28	33.98
GSMUA_Achr6P36730_001	Banana	nucleus	34.81	33.39
Zm00001d019520_P001	Maize	nucleus	33.92	29.22
CDY11319	Canola	nucleus	31.63	27.75
CDX80930	Canola	nucleus	31.45	27.64
CDY04931	Canola	cytosol, extracellular, nucleus	3.71	27.63
CDX96449	Canola	nucleus	31.98	27.55
CDY59935	Canola	nucleus	31.98	27.47
CDX68245	Canola	nucleus	31.63	26.88
CDY11129	Canola	nucleus	31.27	26.46
CDY61331	Canola	nucleus	31.27	26.46
CDY28970	Canola	cytosol	11.66	26.4
CDX98805	Canola	nucleus	30.04	25.95
CDX98804	Canola	nucleus	27.92	25.77
CDX78549	Canola	nucleus	26.86	25.17
CDY14135	Canola	nucleus	31.8	24.93
CDX70530	Canola	nucleus	26.5	24.88
CDY26218	Canola	nucleus	30.57	24.79
CDY31670	Canola	nucleus	31.1	24.55
CDX84255	Canola	nucleus	30.92	24.27
CDY40566	Canola	cytosol, plastid	11.66	23.32
CDX89510	Canola	nucleus	31.1	23.22
CDY25627	Canola	nucleus	30.39	23.06
CDY66122	Canola	nucleus	28.98	22.97
CDY50660	Canola	nucleus	13.43	22.62
CDY51752	Canola	nucleus	13.07	22.02
CDY40567	Canola	mitochondrion	11.48	20.25
CDY56214	Canola	nucleus	28.27	20.18
CDY33517	Canola	cytosol, mitochondrion, nucleus	11.66	19.88
CDX77744	Canola	cytosol	11.48	19.58
CDY26221	Canola	nucleus	30.39	19.22
CDY28971	Canola	mitochondrion	11.48	19.01
CDY33518	Canola	nucleus	12.01	18.68
CDX77745	Canola	nucleus	12.37	18.18
CDX70182	Canola	nucleus	32.33	18.08
CDX92067	Canola	nucleus	11.48	13.77
CDX74192	Canola	nucleus	11.31	13.7
CDY49341	Canola	nucleus	11.84	12.03
CDX94744	Canola	nucleus	14.49	11.97
CDY14903	Canola	nucleus	13.43	11.88
CDY22319	Canola	nucleus	14.49	11.63
CDX96935	Canola	nucleus	14.49	10.46
CDY46064	Canola	nucleus	8.3	9.55
CDY01852	Canola	plasma membrane	29.15	8.89
CDY42922	Canola	plasma membrane, vacuole	12.37	8.45
CDY62521	Canola	nucleus	14.66	6.08
CDY39668	Canola	nucleus	14.66	6.08
CDX74191	Canola	mitochondrion	0.0	0.0
CDY21127	Canola	cytosol	0.0	0.0
CDY15508	Canola	mitochondrion	0.0	0.0
CDY18235	Canola	mitochondrion	0.0	0.0
CDX86631	Canola	cytosol	0.0	0.0
CDX89821	Canola	cytosol	0.0	0.0
CDX92068	Canola	mitochondrion	0.0	0.0
CDY53193	Canola	mitochondrion	0.0	0.0
CDY49340	Canola	cytosol	0.0	0.0
CDY42923	Canola	mitochondrion	0.0	0.0

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.7	MapMan:12.5.1.1	Gene3D:2.170.270.10	Gene3D:2.30.280.10	GO:A0A078FW51
UniProt:A0A078FW51	EnsemblPlants:CDY17156	ProteinID:CDY17156	ProteinID:CDY17156.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005694	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009987
GO:GO:0016043	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0034968	EnsemblPlantsGene:GSBRNA2T00095217001
InterPro:IPR001214	InterPro:IPR003105	InterPro:IPR007728	InterPro:IPR036987	PFAM:PF00856	PFAM:PF02182
PFAM:PF05033	PFscan:PS50280	PFscan:PS50867	PFscan:PS51015	PANTHER:PTHR22884	PANTHER:PTHR22884:SF95
InterPro:PUA-like_sf	InterPro:Pre-SET_dom	InterPro:SET_dom	SMART:SM00317	SMART:SM00466	SMART:SM00468
InterPro:SRA-YDG_sf	InterPro:SRA_YDG	SUPFAM:SSF82199	SUPFAM:SSF88697	UniParc:UPI0004EE4A28	:

Description

BnaA05g10320DBnaA05g10320D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FW51]

Coordinates

chrLK032071:+:227068..228768

Molecular Weight (calculated)

63124.9 Da

IEP (calculated)

8.550

GRAVY (calculated)

-0.227

Length

566 amino acids

Sequence
(BLAST)

001: MTTLVPFPDL NLMPDSPPPE TSSNTRITAV RSLAPTLGVE RNSLAIFPVP GHENHHARVV QTLHQDNQEL ARYVFKRTRM IYDSLLIQLT VEYGPNPKPA
101: VNVRASKLME ERGLWLNKGQ HLVGPVPGVE IGDIFFYRKE LCMYGLHRHS QAGIEYTKAR LSSFGVPIAT SIIASGGYED NEDRGDVLVY SGQGGRDKSG
201: QQRQHQKLVR GNLAMVQSMQ LGVPVRVIRG FHYKNEVSSN VFIYDGLYRI VKSSRVRKSG FDIFKFTLVR IQGQPEMGSA RLMRALTLRN TPLAWMPAGY
301: ISFNLYGKNE GVPVYLYNDI DYDRSPLNYG YISQSDISSV IAAQGGNNGG CDCNLSCTDD CICVRKNGGE LPYSPYGSLL RGKHVIFECG VTCKCTSGCT
401: NRVAQRGLMK KMEVFRTREA GWGVRSLDLI HAGEFICEYA GTTVTKELGE IMSMNGDGLV YPGRFAANWK LWGDLSAVYP GNVPPSYPTI PPVDYAIDVS
501: RVRSVAAFIR HSREPNVMAQ FVFHDHNNLK FPRVMLFALE NISPLTELSL DYVVVDEVDE RLAIRG

Best Arabidopsis Sequence Match ( AT2G33290.1 )
(BLAST)

001: MSTLLPFPDL NLMPDSQSST AGTTAGDTVV TGKLEVKSEP IEEWQTPPSS TSDQSANTDL IAEFIRISEL FRSAFKPLQV KGLDGVSVYG LDSGAIVAVP
101: EKENRELIEP PPGFKDNRVS TVVVSPKFER PRELARIAIL GHEQRKELRQ VMKRTRMTYE SLRIHLMAES MKNHVLGQGR RRRSDMAAAY IMRDRGLWLN
201: YDKHIVGPVT GVEVGDIFFY RMELCVLGLH GQTQAGIDCL TAERSATGEP IATSIVVSGG YEDDEDTGDV LVYTGHGGQD HQHKQCDNQR LVGGNLGMER
301: SMHYGIEVRV IRGIKYENSI SSKVYVYDGL YKIVDWWFAV GKSGFGVFKF RLVRIEGQPM MGSAVMRFAQ TLRNKPSMVR PTGYVSFDLS NKKENVPVFL
401: YNDVDGDQEP RHYEYIAKAV FPPGIFGQGG ISRTGCECKL SCTDDCLCAR KNGGEFAYDD NGHLLKGKHV VFECGEFCTC GPSCKSRVTQ KGLRNRLEVF
501: RSKETGWGVR TLDLIEAGAF ICEYAGVVVT RLQAEILSMN GDVMVYPGRF TDQWRNWGDL SQVYPDFVRP NYPSLPPLDF SMDVSRMRNV ACYISHSKEP
601: NVMVQFVLHD HNHLMFPRVM LFALENISPL AELSLDYGLA DEVNGKLAIC N

Arabidopsis Description

SUVH2Histone-lysine N-methyltransferase family member SUVH2 [Source:UniProtKB/Swiss-Prot;Acc:O22781]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.