CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 4
vacuole 3
plasma membrane 3
golgi 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY17894	Canola	cytosol	96.28	91.1
CDX79790	Canola	cytosol	92.78	86.89
AT2G43980.1	Thale cress	cytosol	86.21	80.74
GSMUA_Achr11P...	Banana	extracellular	37.86	54.57
KRH30969	Soybean	cytosol	53.83	51.14
KRG97919	Soybean	cytosol	53.83	51.14
VIT_05s0094g01410.t01	Wine grape	cytosol	55.58	49.32
Solyc08g015630.2.1	Tomato	cytosol	51.86	46.65
PGSC0003DMT400064927	Potato	cytosol	51.64	46.46
TraesCS5B01G305900.1	Wheat	cytosol	43.33	39.36
Zm00001d021170_P004	Maize	mitochondrion	42.89	39.04
TraesCS5D01G312400.3	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	42.67	39.0
TraesCS5A01G305400.2	Wheat	peroxisome	42.45	38.65
EER99199	Sorghum	mitochondrion	42.23	38.45
Os09t0518700-01	Rice	mitochondrion	45.3	37.84
HORVU5Hr1G079750.26	Barley	mitochondrion	43.54	35.28
GSMUA_Achr11P...	Banana	cytosol	9.63	24.58
CDX75380	Canola	cytosol	10.5	22.12
CDX69422	Canola	cytosol	15.32	21.94
CDX93142	Canola	cytosol	14.66	21.68
CDY28319	Canola	cytosol	16.41	21.68
CDX78705	Canola	cytosol	15.32	21.47
CDY16981	Canola	cytosol	14.88	21.32
CDX70710	Canola	cytosol	14.88	20.99
CDY65442	Canola	cytosol	15.54	19.83
CDY49374	Canola	cytosol	16.63	19.74
CDX69005	Canola	cytosol	16.19	19.27
CDY70702	Canola	cytosol	16.19	19.12
CDX72427	Canola	cytosol	16.19	18.78

Protein Annotations

KEGG:00030+2.7.1.15	KEGG:00030+2.7.1.15+2.7.1.13	KEGG:00562+2.7.1.134+2.7.1.159	KEGG:00562+2.7.1.159	KEGG:04070+2.7.1.159	Gene3D:3.30.470.100
MapMan:50.2.7	GO:A0A078FTN7	UniProt:A0A078FTN7	EnsemblPlants:CDY17895	ProteinID:CDY17895	ProteinID:CDY17895.1
GO:GO:0000166	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0032957	GO:GO:0047325	GO:GO:0052725
GO:GO:0052726	EnsemblPlantsGene:GSBRNA2T00002238001	InterPro:Inositol_tetrakis-P_1-kinase	PFAM:PF05770	PIRSF:PIRSF038163	PANTHER:PTHR14217
PANTHER:PTHR14217:SF1	MetaCyc:PWY-4661	MetaCyc:PWY-6362	MetaCyc:PWY-6365	MetaCyc:PWY-6366	MetaCyc:PWY-6554
SUPFAM:SSF56059	SignalP:SignalP-noTM	UniParc:UPI0004EEC7D0	:	:	:

Description

BnaC04g03240DBnaC04g03240D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FTN7]

Coordinates

chrLK032079:+:366830..370214

Molecular Weight (calculated)

51238.0 Da

IEP (calculated)

4.957

GRAVY (calculated)

0.013

Length

457 amino acids

Sequence
(BLAST)

001: MQSFRVLCWF WLTVKGISYG LDLPENKVDL LRKTAVEYSI DCLPLETSLT SVAFGDALKA WYSDGDILYI ASTRKEETLR ELSPSQLVVV VLEGDSCEDP
101: NMLCISRLEE LPMTICCMNK KAMGDGAAIV AYIMKPSRVE DFAKRGALPM YPTSNGLIFL PLMFEFPLSS QLKHADLIFH KATDEILSIR LNCSVPESSV
201: AVTFSTGMEE LRKYMEDQNA CAVVDPLQHI YPVLDRLKMQ HILLGLEDLT ASGRKIRGAC FHQIDSYDEP DLAQNLSRAG LSLPCIVKPQ VACGVADAHS
301: MAIVFRVEDF KDLNTPVPAI IQEYVDHSSR IFKFYVLGEK IFHAVKKSIP SSSTLRKSAE ENGLRPILFD SLKSLPIGSA NQNPVDEIDL ELVTEAANWL
401: RRKLDLTIFG FDVVIQEGTR DHVVVDLNYL PSFKEVPDNI AVPSFWEAIR NRLDQHV

Best Arabidopsis Sequence Match ( AT2G43980.1 )
(BLAST)

001: MKGVLLDESV LFSPESEDSS PSLRESVPSL LRLLRYSMIR TGISYGLDLP ENKVDLLRKT AAEYSINCLP LETSLTSVTF GDTLKAWYSD GSILYVASSR
101: KEEILRELSP SQLVVLLDVE GDSLEDPNII HIHSLEELPM TICCINKKAM GDGAAIVAYI MKPSRVEDFA KRGALPMYPT SCGLIFLPLM FEFPLASQLK
201: HADIIFHKAT DEILSIELNC SDSKSSVAVT FSTGMEKLKK YMEDQNACAI VDPIRNIYPV VDRLKMQHIL LGLEGLGAAG RKIRGACFLK IDSYDEPDLA
301: QNLSRAGLSL PCIVKPQVAC GVADAHSMAI VFRVEDFKNL NTPVPAIIQE YVDHSSRIFK FYVLGETIFH AVKKSIPSSS SLRKSAEENG LKPILFDSLK
401: SLPVDSANQN PVSEIDLELV TEAATWLRKK LDLTIFGFDV VIQEGTGDHV IVDLNYLPSF KEVPDNIAVP AFWEAIRNRF DQHVQEKH

Arabidopsis Description

ITPK4Inositol 1,3,4-trisphosphate 5/6-kinase 4 [Source:UniProtKB/Swiss-Prot;Acc:O80568]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.