CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:

plasma membrane 6
extracellular 5
endoplasmic reticulum 6
golgi 5
vacuole 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX81428	Canola	endoplasmic reticulum, plasma membrane	84.64	92.58
AT2G10940.2	Thale cress	endoplasmic reticulum, plasma membrane	76.79	73.88
PGSC0003DMT400079355	Potato	extracellular	29.29	59.85
Solyc07g007860.1.1	Tomato	extracellular	29.29	59.42
KRH03647	Soybean	endoplasmic reticulum, extracellular, plasma membrane	35.71	52.63
KRH20158	Soybean	endoplasmic reticulum	41.43	51.1
VIT_11s0016g05840.t01	Wine grape	endoplasmic reticulum, plasma membrane	43.57	45.86
Zm00001d002094_P001	Maize	extracellular, plastid	29.29	40.39
CDY59805	Canola	extracellular	33.93	40.25
CDY12951	Canola	extracellular	39.29	39.86
CDY22735	Canola	extracellular	33.21	39.41
Os04t0644400-01	Rice	nucleus	25.0	38.46
CDY70376	Canola	extracellular	38.57	37.76
Zm00001d026436_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	27.5	37.75
CDY09061	Canola	extracellular	33.93	37.11
CDY06505	Canola	extracellular	27.14	36.54
EES12957	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	28.21	36.41
CDY22936	Canola	plasma membrane	35.36	34.02
CDY47794	Canola	extracellular	26.79	33.78
TraesCS2B01G546700.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	30.36	30.36
TraesCS2A01G518100.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	31.43	30.14
TraesCS2D01G519700.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	31.07	30.1
CDY19310	Canola	extracellular	28.57	29.63
CDY39502	Canola	extracellular	28.21	29.26
HORVU2Hr1G114680.2	Barley	endoplasmic reticulum	31.43	21.0

Protein Annotations

Gene3D:1.10.110.10	MapMan:35.2	UniProt:A0A078FZY9	InterPro:Bifun_inhib/LTP/seed_sf	InterPro:Bifunc_inhib/LTP/seed_store	unigene:Bna.2642
EnsemblPlants:CDY18576	ProteinID:CDY18576	ProteinID:CDY18576.1	EnsemblPlantsGene:GSBRNA2T00005627001	InterPro:Hydrophob_seed	PFAM:PF14547
PANTHER:PTHR31731	PANTHER:PTHR31731:SF54	SMART:SM00499	SUPFAM:SSF47699	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI0004EED671	SEG:seg	:	:	:	:

Description

BnaA09g08190DBnaA09g08190D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FZY9]

Coordinates

chrLK032087:+:12299..13878

Molecular Weight (calculated)

28348.3 Da

IEP (calculated)

9.481

GRAVY (calculated)

0.420

Length

280 amino acids

Sequence
(BLAST)

001: MESSKLSSLS LCFILICIIF FPQQSFSCGS CNHRKGGKPS IKPPVTVPKL PVPPVTVPKL PVPPVTVPKL PVPPVTVPKL PVPPVTVPKL PVPPVTVPKL
101: PVPPVTVPEL PLPPVGGLPI PPVGGLPIPP VGGLPIPPVG GLPIPPVGGL PTLPLPPLPI VGPLLPPGTN PPTPGGKDCP PPPGSHKPPS GTGKATCPID
201: TLKLGACVDL LGGLVKIGLG DPAANKCCPL LKGLVEVEAA ACLCTTLKLK ALNLKLYVPV ALQLLLTCGK NPPPGYTCSI

Best Arabidopsis Sequence Match ( AT2G10940.2 )
(BLAST)

001: MDSSKLSSLS LCLFLICIIY LPQHSLACGS CNPRKGGKHS PKAPKLPVPP VTVPKLPVPP VTVPKLPVPP VTVPKLPVPP VTIPKLPVPP VTVPKLPVPP
101: VTVPKLPVPP VTVPKLPVPP VTVPKLPVPP VTVPKLPVPP VTVPKLPLPP ISGLPIPPVV GPNLPLPPLP IVGPILPPGT TPPATGGKDC PPPPGSVKPP
201: SGGGKATCPI DTLKLGACVD LLGGLVKIGL GDPAVNKCCP LLKGLVEVEA AACLCTTLKL KALDLNLYVP VALQLLLTCG KNPPPGYTCS I

Arabidopsis Description

At2g10940/F15K19.1 [Source:UniProtKB/TrEMBL;Acc:Q9SKI0]
SUBAcon: [endoplasmic reticulum,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.