Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY17156 | Canola | nucleus | 85.69 | 83.57 |
| CDY23755 | Canola | nucleus | 59.42 | 51.49 |
| CDY37735 | Canola | nucleus, plastid | 58.51 | 50.71 |
| AT2G33290.2 | Thale cress | nucleus | 58.33 | 49.46 |
| CDX78210 | Canola | nucleus | 52.17 | 45.64 |
| CDX73506 | Canola | nucleus | 52.17 | 45.5 |
| VIT_05s0049g02220.t01 | Wine grape | nucleus | 51.99 | 42.71 |
| PGSC0003DMT400075191 | Potato | nucleus | 49.64 | 41.52 |
| Solyc12g096990.1.1 | Tomato | nucleus | 49.28 | 40.9 |
| PGSC0003DMT400003956 | Potato | nucleus | 50.0 | 39.66 |
| Solyc09g090810.1.1 | Tomato | nucleus | 50.0 | 39.66 |
| KRH49479 | Soybean | nucleus | 49.82 | 38.79 |
| KRG89164 | Soybean | nucleus | 49.46 | 38.13 |
| GSMUA_Achr5P13120_001 | Banana | nucleus | 41.67 | 37.89 |
| TraesCS2A01G235400.1 | Wheat | nucleus | 45.47 | 37.46 |
| TraesCS2D01G240000.1 | Wheat | nucleus | 45.47 | 37.19 |
| HORVU2Hr1G053260.1 | Barley | nucleus | 45.29 | 37.09 |
| TraesCS2B01G254700.1 | Wheat | nucleus | 45.11 | 37.0 |
| Os07t0435900-01 | Rice | nucleus | 45.65 | 36.84 |
| GSMUA_Achr4P29270_001 | Banana | nucleus | 35.33 | 36.25 |
| GSMUA_Achr1P01130_001 | Banana | nucleus | 35.87 | 36.0 |
| KRH07636 | Soybean | nucleus | 37.32 | 35.83 |
| EER96294 | Sorghum | nucleus | 45.65 | 35.49 |
| GSMUA_Achr6P36730_001 | Banana | nucleus | 36.41 | 34.07 |
| Zm00001d005445_P001 | Maize | nucleus | 34.78 | 33.63 |
| Zm00001d019520_P001 | Maize | nucleus | 34.42 | 28.92 |
| CDY04931 | Canola | cytosol, extracellular, nucleus | 3.8 | 27.63 |
| CDY59935 | Canola | nucleus | 32.97 | 27.62 |
| CDY28970 | Canola | cytosol | 12.32 | 27.2 |
| CDX96449 | Canola | nucleus | 32.25 | 27.09 |
| CDX68245 | Canola | nucleus | 31.88 | 26.43 |
| CDY11319 | Canola | nucleus | 30.62 | 26.2 |
| CDY61331 | Canola | nucleus | 31.52 | 26.01 |
| CDY11129 | Canola | nucleus | 31.52 | 26.01 |
| CDX80930 | Canola | nucleus | 30.25 | 25.93 |
| CDX98805 | Canola | nucleus | 30.62 | 25.8 |
| CDX78549 | Canola | nucleus | 27.54 | 25.17 |
| CDX98804 | Canola | nucleus | 27.54 | 24.8 |
| CDX70530 | Canola | nucleus | 26.81 | 24.54 |
| CDY26218 | Canola | nucleus | 30.62 | 24.21 |
| CDY40566 | Canola | cytosol, plastid | 12.32 | 24.03 |
| CDY31670 | Canola | nucleus | 30.8 | 23.71 |
| CDX84255 | Canola | nucleus | 30.8 | 23.58 |
| CDY14135 | Canola | nucleus | 30.8 | 23.55 |
| CDY66122 | Canola | nucleus | 29.89 | 23.11 |
| CDX89510 | Canola | nucleus | 30.8 | 22.43 |
| CDY25627 | Canola | nucleus | 30.25 | 22.39 |
| CDY50660 | Canola | nucleus | 13.04 | 21.43 |
| CDY51752 | Canola | nucleus | 12.68 | 20.83 |
| CDY56214 | Canola | nucleus | 29.35 | 20.43 |
| CDY33517 | Canola | cytosol, mitochondrion, nucleus | 12.14 | 20.18 |
| CDX77744 | Canola | cytosol | 11.96 | 19.88 |
| CDY40567 | Canola | mitochondrion | 11.41 | 19.63 |
| CDY33518 | Canola | nucleus | 12.68 | 19.23 |
| CDY26221 | Canola | nucleus | 30.25 | 18.66 |
| CDY28971 | Canola | mitochondrion | 11.41 | 18.42 |
| CDX77745 | Canola | nucleus | 12.68 | 18.18 |
| CDX70182 | Canola | nucleus | 31.88 | 17.39 |
| CDX74192 | Canola | nucleus | 11.96 | 14.13 |
| CDX92067 | Canola | nucleus | 11.96 | 13.98 |
| CDY49341 | Canola | nucleus | 12.68 | 12.57 |
| CDX94744 | Canola | nucleus | 15.22 | 12.26 |
| CDY14903 | Canola | nucleus | 13.95 | 12.03 |
| CDY22319 | Canola | nucleus | 15.22 | 11.91 |
| CDX96935 | Canola | nucleus | 14.67 | 10.33 |
| CDY46064 | Canola | nucleus | 8.51 | 9.55 |
| CDY01852 | Canola | plasma membrane | 29.53 | 8.78 |
| CDY42922 | Canola | plasma membrane, vacuole | 12.68 | 8.45 |
| CDY62521 | Canola | nucleus | 14.31 | 5.78 |
| CDY39668 | Canola | nucleus | 14.31 | 5.78 |
| CDY42923 | Canola | mitochondrion | 0.0 | 0.0 |
| CDY18235 | Canola | mitochondrion | 0.0 | 0.0 |
| CDY21127 | Canola | cytosol | 0.0 | 0.0 |
| CDX74191 | Canola | mitochondrion | 0.0 | 0.0 |
| CDY15508 | Canola | mitochondrion | 0.0 | 0.0 |
| CDX86631 | Canola | cytosol | 0.0 | 0.0 |
| CDX89821 | Canola | cytosol | 0.0 | 0.0 |
| CDX92068 | Canola | mitochondrion | 0.0 | 0.0 |
| CDY49340 | Canola | cytosol | 0.0 | 0.0 |
| CDY53193 | Canola | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| KEGG:00310+2.1.1.43 | MapMan:12.3.3.7 | MapMan:12.5.1.1 | Gene3D:2.170.270.10 | Gene3D:2.30.280.10 | GO:A0A078FYM7 |
| UniProt:A0A078FYM7 | EnsemblPlants:CDY19475 | ProteinID:CDY19475 | ProteinID:CDY19475.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005694 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0016571 | GO:GO:0016740 | GO:GO:0018024 | GO:GO:0019538 | GO:GO:0034968 |
| EnsemblPlantsGene:GSBRNA2T00009065001 | InterPro:Hist-Lys_N-MeTrfase_plant | InterPro:IPR001214 | InterPro:IPR003105 | InterPro:IPR007728 | InterPro:IPR025794 |
| InterPro:IPR036987 | PFAM:PF00856 | PFAM:PF02182 | PFAM:PF05033 | PFscan:PS50280 | PFscan:PS50867 |
| PFscan:PS51015 | PFscan:PS51575 | PANTHER:PTHR22884 | PANTHER:PTHR22884:SF95 | InterPro:PUA-like_sf | InterPro:Pre-SET_dom |
| InterPro:SET_dom | SMART:SM00317 | SMART:SM00466 | SMART:SM00468 | InterPro:SRA-YDG_sf | InterPro:SRA_YDG |
| SUPFAM:SSF82199 | SUPFAM:SSF88697 | UniParc:UPI0004EDE724 | : | : | : |
Description
BnaC04g11240DBnaC04g11240D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FYM7]
Coordinates
chrLK032096:+:496751..498409
Molecular Weight (calculated)
61583.6 Da
IEP (calculated)
6.926
GRAVY (calculated)
-0.278
Length
552 amino acids
Sequence
(BLAST)
(BLAST)
001: MPDSPPPETS STAGWSFAPT LDVEADKGSN SLAIVPVPDH ENHQALVVQT LDQDDQGLDR YVLKRTRMIY DSLLIHLTVE GPKPSRAVNV KAWRLMKERE
101: LWLNKGQHLV GSVPGVEIGD IFFYRMELCM FGFHRQSQAG IDYTTAQRSS FGVPIATSII VSSGYEDDED RGDELVYSGQ GGRDKSGQQR HQKLEGGNLA
201: MVHSMQHGVA VRVIRGLEYK SEVRSKVFVY DGLYRITDCS LVRKSGFDIF KFTLVRIQGQ PEMGSARLKR ALTLRNTPLA AMPAGYISFN LYGKNEGVPV
301: YLYNDIDYNR SPLNYGYISQ SDISSVISAQ GGNNGGCNCK LSCTDDCICV RKNGGELPYS PYGYLLRGKP VIFECGVTCK CTSGCANRVA QRGLRKKMEV
401: FRTREAGWGV RSLDLIHAGE FICEYAGIMV TKELGEILST NGESLVYPGR FAGNWKLWGD LSDVYPDNVQ PSYPTLPPID YAMDVSRLRS VAAFIRHSRE
501: PNVMAQFVFH DHNNLKFPRV MLFALENISP LTELSLDYVV VDEVDERLAI RG
101: LWLNKGQHLV GSVPGVEIGD IFFYRMELCM FGFHRQSQAG IDYTTAQRSS FGVPIATSII VSSGYEDDED RGDELVYSGQ GGRDKSGQQR HQKLEGGNLA
201: MVHSMQHGVA VRVIRGLEYK SEVRSKVFVY DGLYRITDCS LVRKSGFDIF KFTLVRIQGQ PEMGSARLKR ALTLRNTPLA AMPAGYISFN LYGKNEGVPV
301: YLYNDIDYNR SPLNYGYISQ SDISSVISAQ GGNNGGCNCK LSCTDDCICV RKNGGELPYS PYGYLLRGKP VIFECGVTCK CTSGCANRVA QRGLRKKMEV
401: FRTREAGWGV RSLDLIHAGE FICEYAGIMV TKELGEILST NGESLVYPGR FAGNWKLWGD LSDVYPDNVQ PSYPTLPPID YAMDVSRLRS VAAFIRHSRE
501: PNVMAQFVFH DHNNLKFPRV MLFALENISP LTELSLDYVV VDEVDERLAI RG
001: MSTLLPFPDL NLMPDSQSST AGTTAGDTVV TGKLEVKSEP IEEWQTPPSS TSDQSANTDL IAEFIRISEL FRSAFKPLQV KGLDGVSVYG LDSGAIVAVP
101: EKENRELIEP PPGFKDNRVS TVVVSPKFER PRELARIAIL GHEQRKELRQ VMKRTRMTYE SLRIHLMAES MKNHVLGQGR RRRSDMAAAY IMRDRGLWLN
201: YDKHIVGPVT GVEVGDIFFY RMELCVLGLH GQTQAGIDCL TAERSATGEP IATSIVVSGG YEDDEDTGDV LVYTGHGGQD HQHKQCDNQR LVGGNLGMER
301: SMHYGIEVRV IRGIKYENSI SSKVYVYDGL YKIVDWWFAV GKSGFGVFKF RLVRIEGQPM MGSAVMRFAQ TLRNKPSMVR PTGYVSFDLS NKKENVPVFL
401: YNDVDGDQEP RHYEYIAKAV FPPGIFGQGG ISRTGCECKL SCTDDCLCAR KNGGEFAYDD NGHLLKGKHV VFECGEFCTC GPSCKSRVTQ KGLRNRLEVF
501: RSKETGWGVR TLDLIEAGAF ICEYAGVVVT RLQAEILSMN GDVMVYPGRF TDQWRNWGDL SQVYPDFVRP NYPSLPPLDF SMDVSRMRNV ACYISHSKEP
601: NVMVQFVLHD HNHLMFPRVM LFALENISPL AELSLDYGLA DEVNGKLAIC N
101: EKENRELIEP PPGFKDNRVS TVVVSPKFER PRELARIAIL GHEQRKELRQ VMKRTRMTYE SLRIHLMAES MKNHVLGQGR RRRSDMAAAY IMRDRGLWLN
201: YDKHIVGPVT GVEVGDIFFY RMELCVLGLH GQTQAGIDCL TAERSATGEP IATSIVVSGG YEDDEDTGDV LVYTGHGGQD HQHKQCDNQR LVGGNLGMER
301: SMHYGIEVRV IRGIKYENSI SSKVYVYDGL YKIVDWWFAV GKSGFGVFKF RLVRIEGQPM MGSAVMRFAQ TLRNKPSMVR PTGYVSFDLS NKKENVPVFL
401: YNDVDGDQEP RHYEYIAKAV FPPGIFGQGG ISRTGCECKL SCTDDCLCAR KNGGEFAYDD NGHLLKGKHV VFECGEFCTC GPSCKSRVTQ KGLRNRLEVF
501: RSKETGWGVR TLDLIEAGAF ICEYAGVVVT RLQAEILSMN GDVMVYPGRF TDQWRNWGDL SQVYPDFVRP NYPSLPPLDF SMDVSRMRNV ACYISHSKEP
601: NVMVQFVLHD HNHLMFPRVM LFALENISPL AELSLDYGLA DEVNGKLAIC N
Arabidopsis Description
SUVH2Histone-lysine N-methyltransferase family member SUVH2 [Source:UniProtKB/Swiss-Prot;Acc:O22781]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.