Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY69792 | Canola | cytosol | 85.12 | 83.96 |
| AT5G09540.1 | Thale cress | nucleus | 61.94 | 63.93 |
| CDY31322 | Canola | cytosol | 52.25 | 40.48 |
| CDY66640 | Canola | cytosol | 33.56 | 31.7 |
| CDX84519 | Canola | nucleus | 51.9 | 31.58 |
| CDY09423 | Canola | cytosol | 32.87 | 30.35 |
| CDY58269 | Canola | nucleus | 51.56 | 29.68 |
| GSMUA_Achr3P06790_001 | Banana | cytosol | 32.87 | 29.23 |
| Solyc07g007230.2.1 | Tomato | nucleus | 39.1 | 26.53 |
| VIT_03s0017g00300.t01 | Wine grape | nucleus | 43.6 | 25.93 |
| KRH42098 | Soybean | nucleus | 39.45 | 25.05 |
| KRH49811 | Soybean | nucleus | 40.48 | 24.84 |
| GSMUA_Achr10P... | Banana | cytosol | 34.26 | 23.52 |
| Zm00001d029409_P001 | Maize | nucleus, peroxisome, plastid | 31.83 | 23.23 |
| Zm00001d047214_P001 | Maize | extracellular | 31.49 | 22.92 |
| EER92178 | Sorghum | nucleus | 31.49 | 22.58 |
| PGSC0003DMT400079004 | Potato | cytosol | 39.1 | 22.11 |
| GSMUA_Achr1P21390_001 | Banana | cytosol | 30.45 | 21.84 |
| Os09t0463700-01 | Rice | nucleus | 27.68 | 21.51 |
| TraesCS4A01G160900.1 | Wheat | cytosol | 29.76 | 21.5 |
| HORVU4Hr1G039650.1 | Barley | nucleus | 29.41 | 21.36 |
| TraesCS4D01G156000.1 | Wheat | nucleus | 29.41 | 21.2 |
| KRH10601 | Soybean | nucleus | 36.33 | 21.13 |
| Os07t0620200-01 | Rice | cytosol, mitochondrion, nucleus | 28.72 | 20.96 |
| TraesCS4B01G160100.1 | Wheat | cytosol | 29.07 | 20.95 |
| KRH21766 | Soybean | nucleus | 35.99 | 20.84 |
| KXG35797 | Sorghum | nucleus | 27.68 | 20.83 |
| Os03t0392400-01 | Rice | nucleus | 29.07 | 20.74 |
| Zm00001d047043_P001 | Maize | nucleus | 29.76 | 19.86 |
| EES14021 | Sorghum | nucleus | 30.1 | 19.68 |
| CDY46799 | Canola | nucleus | 26.3 | 19.39 |
| HORVU5Hr1G055620.1 | Barley | cytosol, nucleus, plastid | 19.72 | 19.26 |
| HORVU2Hr1G030250.2 | Barley | cytosol | 25.61 | 19.02 |
| Zm00001d022168_P001 | Maize | cytosol, mitochondrion, peroxisome | 28.72 | 18.78 |
| TraesCS2B01G191300.1 | Wheat | cytosol | 24.91 | 18.37 |
| KXG36712 | Sorghum | cytosol | 27.34 | 18.16 |
| TraesCS2A01G165100.1 | Wheat | cytosol | 24.57 | 18.16 |
| TraesCS2D01G172200.1 | Wheat | cytosol | 24.57 | 18.16 |
| Zm00001d020762_P001 | Maize | nucleus | 27.34 | 17.95 |
| CDY45966 | Canola | nucleus | 42.56 | 16.53 |
| CDY45473 | Canola | nucleus | 42.21 | 16.31 |
| Solyc11g006140.1.1 | Tomato | nucleus | 33.56 | 16.3 |
| Solyc01g105780.2.1 | Tomato | nucleus | 38.75 | 15.62 |
| Solyc11g006170.1.1 | Tomato | nucleus | 34.6 | 15.41 |
| PGSC0003DMT400073845 | Potato | cytosol | 34.6 | 15.34 |
| TraesCS5D01G252200.1 | Wheat | cytosol, nucleus, plastid | 27.68 | 15.18 |
| PGSC0003DMT400083794 | Potato | nucleus | 38.75 | 15.07 |
| TraesCS5A01G245400.1 | Wheat | cytosol, nucleus, plastid | 27.34 | 14.96 |
| TraesCS5B01G242900.1 | Wheat | cytosol | 26.99 | 14.8 |
| HORVU5Hr1G069570.1 | Barley | nucleus | 26.99 | 14.29 |
Protein Annotations
| EnsemblPlants:CDY21586 | EnsemblPlantsGene:GSBRNA2T00016052001 | Gene3D:1.10.287.110 | InterPro:DnaJ_domain | InterPro:IPR001623 | InterPro:IPR036869 |
| InterPro:J_dom_sf | PANTHER:PTHR45496 | PFAM:PF00226 | PFscan:PS50076 | ProteinID:CDY21586 | ProteinID:CDY21586.1 |
| SMART:SM00271 | SUPFAM:SSF46565 | UniParc:UPI0004EEBD2F | UniProt:A0A078G879 | MapMan:12.5.1.16.2 | : |
Description
BnaC09g47060DBnaC09g47060D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G879]
Coordinates
chrLK032122:-:363748..364617
Molecular Weight (calculated)
32086.4 Da
IEP (calculated)
4.729
GRAVY (calculated)
-0.465
Length
289 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSGDDNGAE TDRWLVTSKE LLASSDFKGA KTLAIRACED DSSRTHAADY IIAIADTLLA GESTVGESKL PDWYAVLRLE KLTKSLERVA VQYRRLALLL
101: DPTVNRLPFA DQALKLVSDA WCVLSDPPRK SIYDRELQVS QPEQLAETSE NPKAASFWTA CPYCYALFEY PKGYEECALR CQQCGRAFEA VKTETPPVES
201: NGQGVYFFCS WAMFPVGFSG DAKSSGSGWS PVSHLFHCPV LSPSDHQANL ETPAPRNYHD VEDGGDELYI TISDDDEERN HAKKNKKGR
101: DPTVNRLPFA DQALKLVSDA WCVLSDPPRK SIYDRELQVS QPEQLAETSE NPKAASFWTA CPYCYALFEY PKGYEECALR CQQCGRAFEA VKTETPPVES
201: NGQGVYFFCS WAMFPVGFSG DAKSSGSGWS PVSHLFHCPV LSPSDHQANL ETPAPRNYHD VEDGGDELYI TISDDDEERN HAKKNKKGR
001: MVSDGGGENN RAEADQLLAT SEKLLASSDF HGAKTFAIRA CEADPSRTDA ADYILAIADT LLAGETTIGD SKVPDWYAVL RISRLTQSPE HVATQYRRLT
101: LLLKLNINRL PFADQALKLV SDAWYVLSDP PRKSIYDREL QLSQTGQSEK FQDSPLQSQA ETLENPTATS FWTACPYCFS LFEYPKGYEE CTLRCQQCRK
201: AFEAVKTQTP PVESNGEGVY FGSWAMFPVG LTSHPNTSNW SPISHLSVCT GQSSSDQQSN LKATPRNDDV DIYIAISDDD
101: LLLKLNINRL PFADQALKLV SDAWYVLSDP PRKSIYDREL QLSQTGQSEK FQDSPLQSQA ETLENPTATS FWTACPYCFS LFEYPKGYEE CTLRCQQCRK
201: AFEAVKTQTP PVESNGEGVY FGSWAMFPVG LTSHPNTSNW SPISHLSVCT GQSSSDQQSN LKATPRNDDV DIYIAISDDD
Arabidopsis Description
At5g09540 [Source:UniProtKB/TrEMBL;Acc:Q9LXB9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.