Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plasma membrane 7
- extracellular 6
- endoplasmic reticulum 5
- golgi 5
- vacuole 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY22735 | Canola | extracellular | 63.57 | 78.39 |
| CDY09061 | Canola | extracellular | 68.04 | 77.34 |
| CDY59805 | Canola | extracellular | 58.42 | 72.03 |
| CDY47794 | Canola | extracellular | 52.58 | 68.92 |
| AT4G15160.1 | Thale cress | extracellular | 64.6 | 68.36 |
| CDY06505 | Canola | extracellular | 46.74 | 65.38 |
| VIT_03s0017g02260.t01 | Wine grape | extracellular | 38.83 | 57.95 |
| TraesCS7D01G020100.1 | Wheat | cytosol, plastid | 21.31 | 55.86 |
| VIT_03s0017g02200.t01 | Wine grape | extracellular | 38.14 | 53.11 |
| GSMUA_Achr2P01500_001 | Banana | endoplasmic reticulum, extracellular | 27.84 | 52.26 |
| TraesCS7A01G024100.1 | Wheat | plastid | 25.09 | 48.99 |
| TraesCS7D01G020000.1 | Wheat | plastid | 23.02 | 47.18 |
| CDY19310 | Canola | extracellular | 43.64 | 47.04 |
| TraesCS2D01G422800.1 | Wheat | extracellular, plastid | 31.27 | 46.67 |
| TraesCS2D01G422700.1 | Wheat | extracellular | 26.12 | 46.34 |
| TraesCS2B01G444500.1 | Wheat | extracellular | 26.12 | 46.34 |
| TraesCS2A01G424800.1 | Wheat | extracellular | 26.12 | 46.34 |
| CDY39502 | Canola | extracellular | 42.96 | 46.3 |
| Os06t0168700-01 | Rice | plastid | 36.77 | 43.5 |
| KRG90032 | Soybean | extracellular | 47.42 | 42.07 |
| Zm00001d002347_P001 | Maize | extracellular | 20.96 | 42.07 |
| Zm00001d026282_P001 | Maize | extracellular | 22.34 | 40.37 |
| TraesCS7A01G024200.1 | Wheat | plastid | 30.58 | 40.09 |
| CDY12951 | Canola | extracellular | 37.46 | 39.49 |
| Os04t0612500-01 | Rice | endoplasmic reticulum, plasma membrane, vacuole | 12.03 | 39.33 |
| HORVU7Hr1G027440.2 | Barley | extracellular | 37.8 | 38.87 |
| OQU82307 | Sorghum | extracellular, plasma membrane | 19.59 | 38.51 |
| CDY70376 | Canola | extracellular | 37.8 | 38.46 |
| KRH17654 | Soybean | extracellular | 50.52 | 38.28 |
| CDX81428 | Canola | endoplasmic reticulum, plasma membrane | 32.99 | 37.5 |
| HORVU2Hr1G099450.1 | Barley | endoplasmic reticulum | 24.05 | 36.46 |
| PGSC0003DMT400035207 | Potato | extracellular | 48.45 | 36.15 |
| EER89284 | Sorghum | endoplasmic reticulum, vacuole | 39.52 | 35.49 |
| CDY18576 | Canola | endoplasmic reticulum, plasma membrane | 34.02 | 35.36 |
| TraesCS7B01G031800.1 | Wheat | extracellular | 35.05 | 31.78 |
| HORVU2Hr1G099370.2 | Barley | mitochondrion | 29.21 | 31.48 |
| HORVU2Hr1G099470.5 | Barley | extracellular | 32.99 | 20.25 |
Protein Annotations
| Gene3D:1.10.110.10 | MapMan:35.1 | UniProt:A0A078GC33 | InterPro:Bifun_inhib/LTP/seed_sf | EnsemblPlants:CDY22936 | ProteinID:CDY22936 |
| ProteinID:CDY22936.1 | EnsemblPlantsGene:GSBRNA2T00021319001 | InterPro:Hydrophob_seed | PFAM:PF14547 | PRINTS:PR01217 | PFscan:PS51257 |
| PANTHER:PTHR31731 | PANTHER:PTHR31731:SF52 | SUPFAM:SSF47699 | SignalP:SignalP-noTM | UniParc:UPI0004EDEF8B | SEG:seg |
Description
BnaA01g18740DBnaA01g18740D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GC33]
Coordinates
chrLK032137:-:552192..553067
Molecular Weight (calculated)
30558.9 Da
IEP (calculated)
9.751
GRAVY (calculated)
-0.423
Length
291 amino acids
Sequence
(BLAST)
(BLAST)
001: MGILHKQNLS FLILLLLGFC AVSYACDCSD PPKSSPHPVK PPKHPVKPPK PPTVKPPQHT PKPPAVKPPH HTPKPPHHTP KPPTVKPPHH TPKLPPHTPK
101: PPTVKPPHHT PKPPTVKPPA PYTPSPPPYT PKPPTVKPPP PYTPSPTPSP PPPTPTPPVV TPPPPPTPTP ETPCPPPPPP PTPCPPPPPA PTPEPETCSI
201: DALKLGACVD VLGGLIHIGL GKSYAKATCC PVLGGLVGLD AAVCLCTTIR AKLLNIDLII PIALELLVDC GKTPPRDFKC PAPQKKTSLL A
101: PPTVKPPHHT PKPPTVKPPA PYTPSPPPYT PKPPTVKPPP PYTPSPTPSP PPPTPTPPVV TPPPPPTPTP ETPCPPPPPP PTPCPPPPPA PTPEPETCSI
201: DALKLGACVD VLGGLIHIGL GKSYAKATCC PVLGGLVGLD AAVCLCTTIR AKLLNIDLII PIALELLVDC GKTPPRDFKC PAPQKKTSLL A
001: MALLHKQNIS FVILLLLGLL AVSYACDCSD PPKPSPHPVK PPKHPAKPPK PPTVKPPTHT PKPPTVKPPP PYIPCPPPPY TPKPPTVKPP PPPYVKPPPP
101: PTVKPPPPPY VKPPPPPTVK PPPPPTPYTP PPPTPYTPPP PTVKPPPPPV VTPPPPTPTP EAPCPPPPPT PYPPPPKPET CPIDALKLGA CVDVLGGLIH
201: IGLGKSYAKA KCCPLLDDLV GLDAAVCLCT TIRAKLLNID LIIPIALEVL VDCGKTPPPR GFKCPTPLKR TPLLG
101: PTVKPPPPPY VKPPPPPTVK PPPPPTPYTP PPPTPYTPPP PTVKPPPPPV VTPPPPTPTP EAPCPPPPPT PYPPPPKPET CPIDALKLGA CVDVLGGLIH
201: IGLGKSYAKA KCCPLLDDLV GLDAAVCLCT TIRAKLLNID LIIPIALEVL VDCGKTPPPR GFKCPTPLKR TPLLG
Arabidopsis Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JJE3]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.