Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra022109.1-P | Field mustard | cytosol | 100.0 | 100.0 |
| CDY40566 | Canola | cytosol, plastid | 95.2 | 84.1 |
| CDY33517 | Canola | cytosol, mitochondrion, nucleus | 73.2 | 55.12 |
| CDX77744 | Canola | cytosol | 73.2 | 55.12 |
| CDY40567 | Canola | mitochondrion | 64.0 | 49.84 |
| CDY28971 | Canola | mitochondrion | 65.6 | 47.95 |
| AT5G47150.1 | Thale cress | cytosol | 61.6 | 46.95 |
| CDY33518 | Canola | nucleus | 45.6 | 31.32 |
| CDX77745 | Canola | nucleus | 44.8 | 29.09 |
| CDX70530 | Canola | nucleus | 34.0 | 14.1 |
| CDX78549 | Canola | nucleus | 34.0 | 14.07 |
| CDY31670 | Canola | nucleus | 40.0 | 13.95 |
| CDX84255 | Canola | nucleus | 40.0 | 13.87 |
| CDX80930 | Canola | nucleus | 34.8 | 13.51 |
| CDY11319 | Canola | nucleus | 34.8 | 13.49 |
| CDX98805 | Canola | nucleus | 34.8 | 13.28 |
| CDX96449 | Canola | nucleus | 34.0 | 12.94 |
| CDX68245 | Canola | nucleus | 34.4 | 12.91 |
| CDY59935 | Canola | nucleus | 34.0 | 12.9 |
| CDY25627 | Canola | nucleus | 38.4 | 12.87 |
| CDY61331 | Canola | nucleus | 34.4 | 12.86 |
| CDY11129 | Canola | nucleus | 34.4 | 12.86 |
| CDX89510 | Canola | nucleus | 38.4 | 12.66 |
| CDY23755 | Canola | nucleus | 31.6 | 12.4 |
| CDX78210 | Canola | nucleus | 31.2 | 12.36 |
| CDX73506 | Canola | nucleus | 31.2 | 12.32 |
| CDY19475 | Canola | nucleus | 27.2 | 12.32 |
| CDY37735 | Canola | nucleus, plastid | 31.2 | 12.24 |
| CDY14135 | Canola | nucleus | 34.0 | 11.77 |
| CDY17156 | Canola | nucleus | 26.4 | 11.66 |
| CDX98804 | Canola | nucleus | 26.0 | 10.6 |
| CDY66122 | Canola | nucleus | 29.6 | 10.36 |
| CDY26218 | Canola | nucleus | 28.8 | 10.32 |
| CDY56214 | Canola | nucleus | 30.0 | 9.46 |
| CDX70182 | Canola | nucleus | 33.6 | 8.3 |
| CDY26221 | Canola | nucleus | 28.4 | 7.93 |
| CDY01852 | Canola | plasma membrane | 29.6 | 3.99 |
| CDY22319 | Canola | nucleus | 8.8 | 3.12 |
| CDX94744 | Canola | nucleus | 8.0 | 2.92 |
| CDY46064 | Canola | nucleus | 5.2 | 2.64 |
| CDX96935 | Canola | nucleus | 8.0 | 2.55 |
| CDY14903 | Canola | nucleus | 6.4 | 2.5 |
| CDY50660 | Canola | nucleus | 3.2 | 2.38 |
| CDY51752 | Canola | nucleus | 2.8 | 2.08 |
| CDY39668 | Canola | nucleus | 10.8 | 1.98 |
| CDY62521 | Canola | nucleus | 10.4 | 1.9 |
| CDX92067 | Canola | nucleus | 2.0 | 1.06 |
| CDY42922 | Canola | plasma membrane, vacuole | 2.4 | 0.72 |
| CDX74192 | Canola | nucleus | 1.2 | 0.64 |
| CDY49341 | Canola | nucleus | 1.2 | 0.54 |
| CDX74191 | Canola | mitochondrion | 0.0 | 0.0 |
| CDX89821 | Canola | cytosol | 0.0 | 0.0 |
| CDY53193 | Canola | mitochondrion | 0.0 | 0.0 |
| CDY49340 | Canola | cytosol | 0.0 | 0.0 |
| CDY42923 | Canola | mitochondrion | 0.0 | 0.0 |
| CDX86631 | Canola | cytosol | 0.0 | 0.0 |
| CDY18235 | Canola | mitochondrion | 0.0 | 0.0 |
| CDX92068 | Canola | mitochondrion | 0.0 | 0.0 |
| CDY04931 | Canola | cytosol, extracellular, nucleus | 0.0 | 0.0 |
| CDY21127 | Canola | cytosol | 0.0 | 0.0 |
| CDY15508 | Canola | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| Gene3D:2.30.280.10 | MapMan:35.1 | GO:A0A078GR05 | UniProt:A0A078GR05 | EnsemblPlants:CDY28970 | ProteinID:CDY28970 |
| ProteinID:CDY28970.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSBRNA2T00041685001 |
| InterPro:IPR003105 | InterPro:IPR036987 | PFAM:PF02182 | PFscan:PS51015 | PANTHER:PTHR22884 | PANTHER:PTHR22884:SF458 |
| InterPro:PUA-like_sf | SMART:SM00466 | InterPro:SRA-YDG_sf | InterPro:SRA_YDG | SUPFAM:SSF88697 | UniParc:UPI000254612E |
Description
BnaA02g25060DBnaA02g25060D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GR05]
Coordinates
chrLK032228:-:432300..433052
Molecular Weight (calculated)
28263.7 Da
IEP (calculated)
8.378
GRAVY (calculated)
-0.545
Length
250 amino acids
Sequence
(BLAST)
(BLAST)
001: MNPSQKRPVV YAGDVVVDHA AANSEPVGVS LGEDHVPTPR EKVHEVLRVF KEVFTQLDRE KQARRGGDLY EATSRIDLKT QVFLEKEGKH VNTPNRIGQV
101: PGIEVGDEFQ YKAELRVIGL HFRIMSGIDY VEVEGVKLAT SIVSSERYDF DDKFDADVVI YTGEGGNVIN KEKNAEDQKM IKGNLALANS MRHKREVRVI
201: RGDERWDGKG KHYVYVGLYL VDKYWLEKGA SGKSVYKFKL CRIPGQPPLT
101: PGIEVGDEFQ YKAELRVIGL HFRIMSGIDY VEVEGVKLAT SIVSSERYDF DDKFDADVVI YTGEGGNVIN KEKNAEDQKM IKGNLALANS MRHKREVRVI
201: RGDERWDGKG KHYVYVGLYL VDKYWLEKGA SGKSVYKFKL CRIPGQPPLT
001: MMMTQRISPS NKRRRVSFVR DFPQFSVKDE SDIGGDDVAT IKENLDGKED SNCVGVAYRD HHRPKEESFD SIMKKAGFNV ANGNLGNGKF PPSKRNVPLP
101: CEGKVQPLSV EEGIKLMAYE SQRRRCFGKP LVSTKVVQKH RYSPAKKKLS NATALRVRHS PMKKLSNASR LRANAHRPTQ HKDERRSGVL SVIQRNRLSK
201: DLTPRQKVQE VLRIFTLVFD ELDRNKAARR GGSETAKSRI DYQTWTILRE MGMQVNSQKR IGSVPGIKVG DKIQFKAALS VIGLHFGIMS GIDYMYKGNK
301: EVATSIVSSE GNDYGDRFIN DVMIYCGQGG NMRSKDHKAI KDQKLVGGNL ALANSIKEKT PVRVIRGERR LDNRGKDYVY DGLYRVEKYW EERGPQGNIL
401: FKFKLRRTCQ PYVDF
101: CEGKVQPLSV EEGIKLMAYE SQRRRCFGKP LVSTKVVQKH RYSPAKKKLS NATALRVRHS PMKKLSNASR LRANAHRPTQ HKDERRSGVL SVIQRNRLSK
201: DLTPRQKVQE VLRIFTLVFD ELDRNKAARR GGSETAKSRI DYQTWTILRE MGMQVNSQKR IGSVPGIKVG DKIQFKAALS VIGLHFGIMS GIDYMYKGNK
301: EVATSIVSSE GNDYGDRFIN DVMIYCGQGG NMRSKDHKAI KDQKLVGGNL ALANSIKEKT PVRVIRGERR LDNRGKDYVY DGLYRVEKYW EERGPQGNIL
401: FKFKLRRTCQ PYVDF
Arabidopsis Description
YDG domain-containing protein At5g47160 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVU3]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.