Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 3
- mitochondrion 1
- cytosol 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY28970 | Canola | cytosol | 84.1 | 95.2 |
| CDY33517 | Canola | cytosol, mitochondrion, nucleus | 73.14 | 62.35 |
| CDX77744 | Canola | cytosol | 73.14 | 62.35 |
| CDY40567 | Canola | mitochondrion | 63.25 | 55.76 |
| CDY28971 | Canola | mitochondrion | 63.96 | 52.92 |
| AT5G47150.1 | Thale cress | cytosol | 59.72 | 51.52 |
| CDY33518 | Canola | nucleus | 44.17 | 34.34 |
| CDX77745 | Canola | nucleus | 43.46 | 31.95 |
| CDY31670 | Canola | nucleus | 37.46 | 14.78 |
| CDX84255 | Canola | nucleus | 37.46 | 14.7 |
| CDX70530 | Canola | nucleus | 30.04 | 14.1 |
| CDX78549 | Canola | nucleus | 30.04 | 14.07 |
| CDX98805 | Canola | nucleus | 32.51 | 14.05 |
| CDY25627 | Canola | nucleus | 36.75 | 13.94 |
| CDX80930 | Canola | nucleus | 31.45 | 13.82 |
| CDY11319 | Canola | nucleus | 31.45 | 13.8 |
| CDY11129 | Canola | nucleus | 32.51 | 13.75 |
| CDY61331 | Canola | nucleus | 32.51 | 13.75 |
| CDX89510 | Canola | nucleus | 36.75 | 13.72 |
| CDX96449 | Canola | nucleus | 31.8 | 13.7 |
| CDX68245 | Canola | nucleus | 32.16 | 13.66 |
| CDY59935 | Canola | nucleus | 31.8 | 13.66 |
| CDY23755 | Canola | nucleus | 28.62 | 12.72 |
| CDX78210 | Canola | nucleus | 28.27 | 12.68 |
| CDX73506 | Canola | nucleus | 28.27 | 12.64 |
| CDY14135 | Canola | nucleus | 31.45 | 12.33 |
| CDY19475 | Canola | nucleus | 24.03 | 12.32 |
| CDY37735 | Canola | nucleus, plastid | 27.56 | 12.24 |
| CDY17156 | Canola | nucleus | 23.32 | 11.66 |
| CDX98804 | Canola | nucleus | 24.03 | 11.09 |
| CDY26218 | Canola | nucleus | 26.86 | 10.89 |
| CDY66122 | Canola | nucleus | 26.86 | 10.64 |
| CDY56214 | Canola | nucleus | 27.21 | 9.71 |
| CDX70182 | Canola | nucleus | 31.1 | 8.7 |
| CDY26221 | Canola | nucleus | 26.5 | 8.38 |
| CDY01852 | Canola | plasma membrane | 27.21 | 4.15 |
| CDY22319 | Canola | nucleus | 7.77 | 3.12 |
| CDX94744 | Canola | nucleus | 7.07 | 2.92 |
| CDY50660 | Canola | nucleus | 3.18 | 2.68 |
| CDX96935 | Canola | nucleus | 7.42 | 2.68 |
| CDY46064 | Canola | nucleus | 4.59 | 2.64 |
| CDY14903 | Canola | nucleus | 5.65 | 2.5 |
| CDY51752 | Canola | nucleus | 2.83 | 2.38 |
| CDY39668 | Canola | nucleus | 9.89 | 2.05 |
| CDY62521 | Canola | nucleus | 9.54 | 1.98 |
| CDY42922 | Canola | plasma membrane, vacuole | 3.53 | 1.21 |
| CDX92067 | Canola | nucleus | 1.77 | 1.06 |
| CDX74192 | Canola | nucleus | 1.06 | 0.64 |
| CDY49341 | Canola | nucleus | 1.06 | 0.54 |
| CDY15508 | Canola | mitochondrion | 0.0 | 0.0 |
| CDY18235 | Canola | mitochondrion | 0.0 | 0.0 |
| CDX74191 | Canola | mitochondrion | 0.0 | 0.0 |
| CDY04931 | Canola | cytosol, extracellular, nucleus | 0.0 | 0.0 |
| CDY53193 | Canola | mitochondrion | 0.0 | 0.0 |
| CDY21127 | Canola | cytosol | 0.0 | 0.0 |
| CDY49340 | Canola | cytosol | 0.0 | 0.0 |
| CDX92068 | Canola | mitochondrion | 0.0 | 0.0 |
| CDY42923 | Canola | mitochondrion | 0.0 | 0.0 |
| CDX86631 | Canola | cytosol | 0.0 | 0.0 |
| CDX89821 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:2.30.280.10 | MapMan:35.1 | GO:A0A078HS97 | UniProt:A0A078HS97 | EnsemblPlants:CDY40566 | ProteinID:CDY40566 |
| ProteinID:CDY40566.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSBRNA2T00069894001 |
| InterPro:IPR003105 | InterPro:IPR036987 | PFAM:PF02182 | PFscan:PS51015 | PANTHER:PTHR22884 | PANTHER:PTHR22884:SF458 |
| InterPro:PUA-like_sf | SMART:SM00466 | InterPro:SRA-YDG_sf | InterPro:SRA_YDG | SUPFAM:SSF88697 | UniParc:UPI00006C6053 |
Description
BnaC02g33260DBnaC02g33260D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HS97]
Coordinates
chrLK032474:-:192399..193250
Molecular Weight (calculated)
32065.1 Da
IEP (calculated)
9.492
GRAVY (calculated)
-0.715
Length
283 amino acids
Sequence
(BLAST)
(BLAST)
001: MNPSQKRPVV NASRDFPPGR GTSTNVPDKA FKKSRAGDVV VHHAVANSEP VEVSPGEEQE FRNSHQEHVP TPREKVHEVL RVFKEVFTQL DREKQARRGG
101: DLYEATARID LKTQVFLEKE GKHVNTPNRI GQVPGIEVGD EFQYKAELRV VGLHFRTMSG IDYVEVEGVK LATSIVSSER YDFDDKFDAD VVIYTGEGGN
201: VINKEKKAED QKMIKGNLAL ANSMRHKREV RVIRGDERWD GKGKHYVYAG LYLVDKYWLE KGVSGKSVYK FKLCRIPGQP PLT
101: DLYEATARID LKTQVFLEKE GKHVNTPNRI GQVPGIEVGD EFQYKAELRV VGLHFRTMSG IDYVEVEGVK LATSIVSSER YDFDDKFDAD VVIYTGEGGN
201: VINKEKKAED QKMIKGNLAL ANSMRHKREV RVIRGDERWD GKGKHYVYAG LYLVDKYWLE KGVSGKSVYK FKLCRIPGQP PLT
001: MSQKRSLVFA IRDFPPGCGT HIDVSSSLNH PAEKAFKHPR TGDVSGENLS FAEAKPEGTC LKRESADQDH IFAAPEHNAK REPAGQDHVV AATTVAYATS
101: SHRQKVEIGN SDCDPTPREK VLEVLSLFKQ VYNQLDRDKK ARRGGDFLDA TSRIDLKTLT VLEKMGKQVN TEKRIGSVPG INIGDVFQYK TELRVVGLHS
201: KPMCGIDYIK LGDDRITTSI VASEGYGYND TYNSGVMVYT GEGGNVINKQ KKTEDQKLVK GNLALATSMR QKSQVRVIRG EERLDRKGKR YVYDGLYMVE
301: EYWVERDVRG KSVYKFKLCR IPGQLPLT
101: SHRQKVEIGN SDCDPTPREK VLEVLSLFKQ VYNQLDRDKK ARRGGDFLDA TSRIDLKTLT VLEKMGKQVN TEKRIGSVPG INIGDVFQYK TELRVVGLHS
201: KPMCGIDYIK LGDDRITTSI VASEGYGYND TYNSGVMVYT GEGGNVINKQ KKTEDQKLVK GNLALATSMR QKSQVRVIRG EERLDRKGKR YVYDGLYMVE
301: EYWVERDVRG KSVYKFKLCR IPGQLPLT
Arabidopsis Description
YDG domain-containing protein At5g47150 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHI0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.