Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 5
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY28971 | Canola | mitochondrion | 94.08 | 88.3 |
| Bra022108.1-P | Field mustard | mitochondrion | 92.21 | 80.65 |
| CDY28970 | Canola | cytosol | 49.84 | 64.0 |
| CDY40566 | Canola | cytosol, plastid | 55.76 | 63.25 |
| CDY33517 | Canola | cytosol, mitochondrion, nucleus | 64.8 | 62.65 |
| CDX77744 | Canola | cytosol | 64.49 | 62.35 |
| AT5G47150.1 | Thale cress | cytosol | 61.68 | 60.37 |
| CDY33518 | Canola | nucleus | 39.56 | 34.89 |
| CDX77745 | Canola | nucleus | 39.56 | 32.99 |
| CDY31670 | Canola | nucleus | 32.4 | 14.5 |
| CDX84255 | Canola | nucleus | 31.78 | 14.15 |
| CDY25627 | Canola | nucleus | 32.09 | 13.81 |
| CDX70530 | Canola | nucleus | 25.86 | 13.76 |
| CDX78549 | Canola | nucleus | 25.86 | 13.74 |
| CDX89510 | Canola | nucleus | 32.09 | 13.59 |
| CDX80930 | Canola | nucleus | 26.48 | 13.2 |
| CDY59935 | Canola | nucleus | 26.79 | 13.05 |
| CDX96449 | Canola | nucleus | 26.48 | 12.94 |
| CDX68245 | Canola | nucleus | 26.79 | 12.91 |
| CDY11319 | Canola | nucleus | 25.86 | 12.87 |
| CDY61331 | Canola | nucleus | 26.79 | 12.86 |
| CDY11129 | Canola | nucleus | 26.79 | 12.86 |
| CDX98805 | Canola | nucleus | 26.17 | 12.82 |
| CDY23755 | Canola | nucleus | 24.61 | 12.4 |
| CDY37735 | Canola | nucleus, plastid | 23.68 | 11.93 |
| CDY14135 | Canola | nucleus | 26.79 | 11.91 |
| CDY17156 | Canola | nucleus | 20.25 | 11.48 |
| CDY19475 | Canola | nucleus | 19.63 | 11.41 |
| CDX78210 | Canola | nucleus | 22.12 | 11.25 |
| CDX73506 | Canola | nucleus | 22.12 | 11.22 |
| CDY66122 | Canola | nucleus | 24.92 | 11.2 |
| CDY26218 | Canola | nucleus | 23.36 | 10.74 |
| CDX98804 | Canola | nucleus | 20.25 | 10.6 |
| CDY56214 | Canola | nucleus | 23.68 | 9.58 |
| CDX70182 | Canola | nucleus | 27.1 | 8.6 |
| CDY26221 | Canola | nucleus | 23.68 | 8.49 |
| CDY01852 | Canola | plasma membrane | 23.99 | 4.15 |
| CDY50660 | Canola | nucleus | 3.43 | 3.27 |
| CDY22319 | Canola | nucleus | 6.54 | 2.98 |
| CDY51752 | Canola | nucleus | 3.12 | 2.98 |
| CDX96935 | Canola | nucleus | 6.85 | 2.81 |
| CDX94744 | Canola | nucleus | 5.61 | 2.63 |
| CDY14903 | Canola | nucleus | 4.98 | 2.5 |
| CDY46064 | Canola | nucleus | 3.43 | 2.24 |
| CDY39668 | Canola | nucleus | 8.41 | 1.98 |
| CDY62521 | Canola | nucleus | 8.1 | 1.9 |
| CDX92067 | Canola | nucleus | 1.87 | 1.27 |
| CDY42922 | Canola | plasma membrane, vacuole | 3.12 | 1.21 |
| CDY49341 | Canola | nucleus | 1.25 | 0.72 |
| CDX74192 | Canola | nucleus | 0.93 | 0.64 |
| CDX89821 | Canola | cytosol | 0.0 | 0.0 |
| CDY15508 | Canola | mitochondrion | 0.0 | 0.0 |
| CDX86631 | Canola | cytosol | 0.0 | 0.0 |
| CDY42923 | Canola | mitochondrion | 0.0 | 0.0 |
| CDY49340 | Canola | cytosol | 0.0 | 0.0 |
| CDX92068 | Canola | mitochondrion | 0.0 | 0.0 |
| CDY04931 | Canola | cytosol, extracellular, nucleus | 0.0 | 0.0 |
| CDY53193 | Canola | mitochondrion | 0.0 | 0.0 |
| CDY21127 | Canola | cytosol | 0.0 | 0.0 |
| CDX74191 | Canola | mitochondrion | 0.0 | 0.0 |
| CDY18235 | Canola | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| Gene3D:2.30.280.10 | MapMan:35.1 | GO:A0A078HRY5 | UniProt:A0A078HRY5 | EnsemblPlants:CDY40567 | ProteinID:CDY40567 |
| ProteinID:CDY40567.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSBRNA2T00069895001 |
| InterPro:IPR003105 | InterPro:IPR036987 | PFAM:PF02182 | PFscan:PS51015 | PANTHER:PTHR22884 | PANTHER:PTHR22884:SF458 |
| InterPro:PUA-like_sf | SMART:SM00466 | InterPro:SRA-YDG_sf | InterPro:SRA_YDG | SUPFAM:SSF88697 | UniParc:UPI0004EDAE22 |
Description
BnaC02g33250DBnaC02g33250D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HRY5]
Coordinates
chrLK032474:-:198216..199742
Molecular Weight (calculated)
35993.2 Da
IEP (calculated)
9.980
GRAVY (calculated)
-0.579
Length
321 amino acids
Sequence
(BLAST)
(BLAST)
001: MNRSRKRSIV YAIRDNPLGC GTHPQRSIKI PRTSDVKQED PAGSSDQHLK NSVRDYTVAA PSPKETCLKQ EPAFRNSHHA PVAAAPRFKG ASSKQEAAIT
101: SSDQHDLTPR EQVLEVLRLF KDVFRQLDRD KQARLLGGDV FDATARIDIR TLDVLEKMGK QVNTEKRIGV VPGVNVGDEF QYKTELRLVG LHFKTMCGID
201: YMDIGDVKLA TSIVSSEGYG YSDKFGAGVV VYTGEGGNVV TKEKKTEDQR LVKGNLALAN SMRKRSLVRV IRGEERLDKK GKRYVYDGLY LVDKYWLEKE
301: VRGTTVYKFK LCKVPGQPPL C
101: SSDQHDLTPR EQVLEVLRLF KDVFRQLDRD KQARLLGGDV FDATARIDIR TLDVLEKMGK QVNTEKRIGV VPGVNVGDEF QYKTELRLVG LHFKTMCGID
201: YMDIGDVKLA TSIVSSEGYG YSDKFGAGVV VYTGEGGNVV TKEKKTEDQR LVKGNLALAN SMRKRSLVRV IRGEERLDKK GKRYVYDGLY LVDKYWLEKE
301: VRGTTVYKFK LCKVPGQPPL C
001: MSQKRSLVFA IRDFPPGCGT HIDVSSSLNH PAEKAFKHPR TGDVSGENLS FAEAKPEGTC LKRESADQDH IFAAPEHNAK REPAGQDHVV AATTVAYATS
101: SHRQKVEIGN SDCDPTPREK VLEVLSLFKQ VYNQLDRDKK ARRGGDFLDA TSRIDLKTLT VLEKMGKQVN TEKRIGSVPG INIGDVFQYK TELRVVGLHS
201: KPMCGIDYIK LGDDRITTSI VASEGYGYND TYNSGVMVYT GEGGNVINKQ KKTEDQKLVK GNLALATSMR QKSQVRVIRG EERLDRKGKR YVYDGLYMVE
301: EYWVERDVRG KSVYKFKLCR IPGQLPLT
101: SHRQKVEIGN SDCDPTPREK VLEVLSLFKQ VYNQLDRDKK ARRGGDFLDA TSRIDLKTLT VLEKMGKQVN TEKRIGSVPG INIGDVFQYK TELRVVGLHS
201: KPMCGIDYIK LGDDRITTSI VASEGYGYND TYNSGVMVYT GEGGNVINKQ KKTEDQKLVK GNLALATSMR QKSQVRVIRG EERLDRKGKR YVYDGLYMVE
301: EYWVERDVRG KSVYKFKLCR IPGQLPLT
Arabidopsis Description
YDG domain-containing protein At5g47150 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHI0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.