Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 2
- plasma membrane 5
- extracellular 4
- endoplasmic reticulum 4
- golgi 4
- vacuole 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX92067 | Canola | nucleus | 48.07 | 84.32 |
| CDX74192 | Canola | nucleus | 46.98 | 83.3 |
| CDY49341 | Canola | nucleus | 53.38 | 79.35 |
| AT3G04380.1 | Thale cress | nucleus | 46.74 | 78.66 |
| Zm00001d051126_P004 | Maize | nucleus | 25.36 | 41.42 |
| TraesCSU01G137800.1 | Wheat | nucleus | 20.41 | 40.53 |
| PGSC0003DMT400051920 | Potato | nucleus | 24.03 | 39.1 |
| KRH34133 | Soybean | nucleus | 31.64 | 38.19 |
| KRH68776 | Soybean | nucleus | 30.68 | 37.52 |
| KRG92731 | Soybean | nucleus | 32.0 | 37.17 |
| KRG97025 | Soybean | nucleus | 12.56 | 36.62 |
| TraesCS2D01G478100.1 | Wheat | nucleus | 25.6 | 35.45 |
| TraesCS2A01G478800.1 | Wheat | nucleus | 25.6 | 35.33 |
| TraesCS2B01G503200.1 | Wheat | nucleus | 25.6 | 35.27 |
| HORVU7Hr1G064110.6 | Barley | nucleus, plastid | 24.88 | 33.88 |
| OQU85329 | Sorghum | nucleus | 27.42 | 33.48 |
| GSMUA_Achr1P20340_001 | Banana | nucleus | 28.5 | 33.24 |
| CDY04931 | Canola | cytosol, extracellular, nucleus | 3.02 | 32.89 |
| TraesCS6A01G226600.1 | Wheat | nucleus | 26.57 | 32.31 |
| TraesCS6B01G255000.1 | Wheat | nucleus | 26.57 | 32.31 |
| TraesCS6D01G208400.1 | Wheat | nucleus | 26.45 | 32.16 |
| Os02t0621100-01 | Rice | nucleus | 28.02 | 31.31 |
| TraesCS2D01G378500.3 | Wheat | nucleus | 24.76 | 30.24 |
| TraesCS2A01G382000.5 | Wheat | nucleus | 24.64 | 30.13 |
| HORVU6Hr1G057990.5 | Barley | nucleus | 29.35 | 30.11 |
| TraesCS2D01G477200.1 | Wheat | mitochondrion, nucleus | 26.81 | 30.08 |
| TraesCS2B01G501300.2 | Wheat | mitochondrion, nucleus | 26.69 | 29.86 |
| TraesCS2B01G399300.4 | Wheat | nucleus | 24.28 | 29.69 |
| HORVU2Hr1G127700.1 | Barley | nucleus | 25.24 | 29.56 |
| TraesCS2A01G478000.1 | Wheat | mitochondrion, nucleus | 26.33 | 29.26 |
| EES15150 | Sorghum | nucleus | 26.09 | 29.23 |
| CDY14903 | Canola | nucleus | 22.34 | 28.91 |
| HORVU2Hr1G107560.8 | Barley | mitochondrion, nucleus | 25.36 | 28.89 |
| Zm00001d049884_P006 | Maize | nucleus | 25.36 | 28.26 |
| TraesCS2B01G616200.1 | Wheat | nucleus | 24.76 | 27.82 |
| Zm00001d031851_P002 | Maize | nucleus | 25.0 | 27.79 |
| TraesCS2D01G566400.1 | Wheat | nucleus | 24.52 | 27.54 |
| HORVU2Hr1G127770.1 | Barley | nucleus | 23.31 | 27.3 |
| CDX94744 | Canola | nucleus | 22.34 | 27.01 |
| EES13161 | Sorghum | nucleus | 25.6 | 26.9 |
| VIT_07s0005g04190.t01 | Wine grape | mitochondrion, nucleus | 26.93 | 26.3 |
| CDY22319 | Canola | nucleus | 22.22 | 26.1 |
| Solyc06g083760.2.1 | Tomato | nucleus | 26.93 | 25.9 |
| CDX96935 | Canola | nucleus | 24.28 | 25.64 |
| Solyc09g072890.1.1 | Tomato | nucleus | 25.36 | 25.45 |
| CDY50660 | Canola | nucleus | 9.66 | 23.81 |
| CDY51752 | Canola | nucleus | 9.42 | 23.21 |
| Zm00001d002938_P001 | Maize | nucleus | 19.93 | 23.21 |
| CDX68245 | Canola | nucleus | 13.53 | 16.82 |
| CDY11129 | Canola | nucleus | 13.53 | 16.74 |
| CDY61331 | Canola | nucleus | 13.41 | 16.59 |
| CDY11319 | Canola | nucleus | 12.92 | 16.59 |
| CDX80930 | Canola | nucleus | 12.8 | 16.46 |
| CDX96449 | Canola | nucleus | 12.92 | 16.29 |
| CDY59935 | Canola | nucleus | 12.8 | 16.09 |
| CDX98805 | Canola | nucleus | 12.56 | 15.88 |
| CDX98804 | Canola | nucleus | 11.47 | 15.5 |
| CDX70530 | Canola | nucleus | 10.63 | 14.59 |
| CDX78549 | Canola | nucleus | 10.51 | 14.4 |
| CDY14135 | Canola | nucleus | 12.2 | 13.99 |
| CDX89510 | Canola | nucleus | 12.44 | 13.59 |
| CDX78210 | Canola | nucleus | 10.27 | 13.47 |
| CDX73506 | Canola | nucleus | 10.27 | 13.43 |
| CDY25627 | Canola | nucleus | 11.96 | 13.27 |
| CDY26218 | Canola | nucleus | 11.11 | 13.18 |
| CDY31670 | Canola | nucleus | 11.35 | 13.11 |
| CDX84255 | Canola | nucleus | 11.35 | 13.04 |
| CDY66122 | Canola | nucleus | 11.11 | 12.89 |
| CDY19475 | Canola | nucleus | 8.45 | 12.68 |
| CDY46064 | Canola | nucleus | 7.49 | 12.6 |
| CDY37735 | Canola | nucleus, plastid | 9.54 | 12.4 |
| CDY17156 | Canola | nucleus | 8.45 | 12.37 |
| CDY23755 | Canola | nucleus | 9.06 | 11.77 |
| CDY56214 | Canola | nucleus | 10.99 | 11.48 |
| CDY26221 | Canola | nucleus | 10.63 | 9.83 |
| CDX70182 | Canola | nucleus | 11.71 | 9.58 |
| CDY39668 | Canola | nucleus | 14.37 | 8.71 |
| CDY62521 | Canola | nucleus | 14.37 | 8.71 |
| CDY01852 | Canola | plasma membrane | 10.87 | 4.85 |
| CDY40566 | Canola | cytosol, plastid | 1.21 | 3.53 |
| CDX77745 | Canola | nucleus | 1.57 | 3.38 |
| CDX77744 | Canola | cytosol | 1.33 | 3.31 |
| CDY33517 | Canola | cytosol, mitochondrion, nucleus | 1.33 | 3.31 |
| CDY33518 | Canola | nucleus | 1.45 | 3.3 |
| CDY40567 | Canola | mitochondrion | 1.21 | 3.12 |
| CDY28971 | Canola | mitochondrion | 1.21 | 2.92 |
| CDY49340 | Canola | cytosol | 0.24 | 2.47 |
| CDX86631 | Canola | cytosol | 0.24 | 2.47 |
| CDX89821 | Canola | cytosol | 0.24 | 2.47 |
| CDY21127 | Canola | cytosol | 0.24 | 2.47 |
| CDY28970 | Canola | cytosol | 0.72 | 2.4 |
| CDX92068 | Canola | mitochondrion | 0.36 | 2.14 |
| CDY15508 | Canola | mitochondrion | 0.36 | 2.14 |
| CDY18235 | Canola | mitochondrion | 0.36 | 2.14 |
| CDX74191 | Canola | mitochondrion | 0.36 | 2.14 |
| CDY53193 | Canola | mitochondrion | 0.36 | 2.14 |
| CDY42923 | Canola | mitochondrion | 0.36 | 2.14 |
Protein Annotations
| KEGG:00310+2.1.1.43 | Gene3D:1.10.8.850 | MapMan:12.3.3.7 | MapMan:26.10.1.1 | Gene3D:3.30.430.20 | GO:A0A078HYF0 |
| UniProt:A0A078HYF0 | EnsemblPlants:CDY42922 | ProteinID:CDY42922 | ProteinID:CDY42922.1 | InterPro:GNK2 | InterPro:GNK2_sf |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005694 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008270 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0016740 |
| GO:GO:0018024 | GO:GO:0019538 | GO:GO:0034968 | EnsemblPlantsGene:GSBRNA2T00075659001 | InterPro:IPR001214 | InterPro:IPR002902 |
| InterPro:IPR007728 | InterPro:IPR025776 | InterPro:IPR038408 | PFAM:PF00856 | PFAM:PF01657 | PFAM:PF05033 |
| PFAM:PF10440 | PFscan:PS50280 | PFscan:PS50867 | PFscan:PS51473 | PFscan:PS51580 | PANTHER:PTHR22884 |
| PANTHER:PTHR22884:SF460 | InterPro:Pre-SET_dom | InterPro:SET_dom | SMART:SM00317 | SMART:SM00468 | SUPFAM:SSF82199 |
| InterPro:SUVR4/1/2 | TMHMM:TMhelix | UniParc:UPI0004EEAEAE | InterPro:WIYLD_domain | SEG:seg | : |
Description
BnaC05g47290DBnaC05g47290D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HYF0]
Coordinates
chrLK032538:+:216861..222388
Molecular Weight (calculated)
92807.0 Da
IEP (calculated)
6.119
GRAVY (calculated)
-0.382
Length
828 amino acids
Sequence
(BLAST)
(BLAST)
001: MVVHLISPIA RTLALIFISL PSLINTSLLD YDTLVFSKCD SSDTNILQKT TTTQYPNYSN HNLFLRAQAL YSFLSKLESE SSRAKFFKTL AGNDQHAVSG
101: WFQCREDYPS EICHRCVTEL RGISSRMCGN ATSARVHLRG CHMVYEFEFV DTPTAQAYNH HNYKLMETPE RGLIHKICNG ATAETFAGFE EMRTVAFTAA
201: ETGVVDGHGF YEESYKLMHV VAQCDGHVEA CECGECVSAA AAAAAEECPW SIAGQIYLEG CYVGYTYNPH EYPGDSYHEE GGQASTGKSL AIVVGGVAAL
301: VLVAIFFLFL KSLRRKGDES QSSISSACNS IYFLDCDKAA QFQKLPLQLL TESDLDMLPL ILTDERVRKA CETTRELKIP DEKTLSVLKK LLQENGENWT
401: LIKLDNYTAL IDAIYSLDDE QEEEQRESSS NRGKNVVVGT ECSPATLKRK YETRSATSGS SSEEAQKQQQ TSNGVVRKKK YKTIIRDITK GSESVEISLV
501: DEVGTEQVPK FTYIPHNIVY QSAYLHVSLA RISDDDCCAS CKGDCLSADF PCACARETGG EYAYSKDGLL KEEFLDTCLK MKKAPDSFSK FYCQDCPLER
601: GDGKCEGHLI RKFIKECWRK CGCDMMCGNR VVQRGIRCQL QVYFTQEGKG WGIRTLQDLP KGTFVCEYIG EILTNTELYE RNIRSTSERH TYPVTLDADW
701: GSEKDLKDEE ALCLDATICG NVARFVNHRC EDANLIDIPV QIETPDRHYY HIAFFTIRDV KAMDELTWDY LIDFHDESHP VKAFRCCCGS ELCRDKKPKG
801: SGGKSGERRK AVPAKKQAGS KAMALKRK
101: WFQCREDYPS EICHRCVTEL RGISSRMCGN ATSARVHLRG CHMVYEFEFV DTPTAQAYNH HNYKLMETPE RGLIHKICNG ATAETFAGFE EMRTVAFTAA
201: ETGVVDGHGF YEESYKLMHV VAQCDGHVEA CECGECVSAA AAAAAEECPW SIAGQIYLEG CYVGYTYNPH EYPGDSYHEE GGQASTGKSL AIVVGGVAAL
301: VLVAIFFLFL KSLRRKGDES QSSISSACNS IYFLDCDKAA QFQKLPLQLL TESDLDMLPL ILTDERVRKA CETTRELKIP DEKTLSVLKK LLQENGENWT
401: LIKLDNYTAL IDAIYSLDDE QEEEQRESSS NRGKNVVVGT ECSPATLKRK YETRSATSGS SSEEAQKQQQ TSNGVVRKKK YKTIIRDITK GSESVEISLV
501: DEVGTEQVPK FTYIPHNIVY QSAYLHVSLA RISDDDCCAS CKGDCLSADF PCACARETGG EYAYSKDGLL KEEFLDTCLK MKKAPDSFSK FYCQDCPLER
601: GDGKCEGHLI RKFIKECWRK CGCDMMCGNR VVQRGIRCQL QVYFTQEGKG WGIRTLQDLP KGTFVCEYIG EILTNTELYE RNIRSTSERH TYPVTLDADW
701: GSEKDLKDEE ALCLDATICG NVARFVNHRC EDANLIDIPV QIETPDRHYY HIAFFTIRDV KAMDELTWDY LIDFHDESHP VKAFRCCCGS ELCRDKKPKG
801: SGGKSGERRK AVPAKKQAGS KAMALKRK
001: MISLSGLTSS VESDLDMQQA MLTNKDEKVL KALERTRQLD IPDEKTMPVL MKLLEEAGGN WSYIKLDNYT ALVDAIYSVE DENKQSEGSS NGNRGKNLKV
101: IDSPATLKKT YETRSASSGS SIQVVQKQPQ LSNGDRKRKY KSRIADITKG SESVKIPLVD DVGSEAVPKF TYIPHNIVYQ SAYLHVSLAR ISDEDCCANC
201: KGNCLSADFP CTCARETSGE YAYTKEGLLK EKFLDTCLKM KKEPDSFPKV YCKDCPLERD HDKGTYGKCD GHLIRKFIKE CWRKCGCDMQ CGNRVVQRGI
301: RCQLQVYFTQ EGKGWGLRTL QDLPKGTFIC EYIGEILTNT ELYDRNVRSS SERHTYPVTL DADWGSEKDL KDEEALCLDA TICGNVARFI NHRCEDANMI
401: DIPIEIETPD RHYYHIAFFT LRDVKAMDEL TWDYMIDFND KSHPVKAFRC CCGSESCRDR KIKGSQGKSI ERRKIVSAKK QQGSKEVSKK RK
101: IDSPATLKKT YETRSASSGS SIQVVQKQPQ LSNGDRKRKY KSRIADITKG SESVKIPLVD DVGSEAVPKF TYIPHNIVYQ SAYLHVSLAR ISDEDCCANC
201: KGNCLSADFP CTCARETSGE YAYTKEGLLK EKFLDTCLKM KKEPDSFPKV YCKDCPLERD HDKGTYGKCD GHLIRKFIKE CWRKCGCDMQ CGNRVVQRGI
301: RCQLQVYFTQ EGKGWGLRTL QDLPKGTFIC EYIGEILTNT ELYDRNVRSS SERHTYPVTL DADWGSEKDL KDEEALCLDA TICGNVARFI NHRCEDANMI
401: DIPIEIETPD RHYYHIAFFT LRDVKAMDEL TWDYMIDFND KSHPVKAFRC CCGSESCRDR KIKGSQGKSI ERRKIVSAKK QQGSKEVSKK RK
Arabidopsis Description
SUVR4Histone-lysine N-methyltransferase SUVR4 [Source:UniProtKB/Swiss-Prot;Acc:Q8W595]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.