CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45966	Canola	nucleus	65.78	66.13
CDY21586	Canola	cytosol	16.31	42.21
CDY69792	Canola	cytosol	16.31	41.64
AT1G62970.1	Thale cress	nucleus	39.3	36.89
CDY31322	Canola	cytosol	17.65	35.39
CDY66640	Canola	cytosol	14.04	34.31
CDY09423	Canola	cytosol	14.3	34.19
GSMUA_Achr3P06790_001	Banana	cytosol	13.37	30.77
CDX84519	Canola	nucleus	19.25	30.32
Solyc07g007230.2.1	Tomato	nucleus	16.71	29.34
CDY58269	Canola	nucleus	18.98	28.29
Os09t0463700-01	Rice	nucleus	13.37	26.88
VIT_03s0017g00300.t01	Wine grape	nucleus	17.38	26.75
KRH42098	Soybean	nucleus	15.91	26.15
KRH49811	Soybean	nucleus	16.31	25.9
KXG35797	Sorghum	nucleus	13.24	25.78
GSMUA_Achr10P...	Banana	cytosol	14.17	25.18
EES14021	Sorghum	nucleus	14.71	24.89
Zm00001d047214_P001	Maize	extracellular	12.7	23.93
EER92178	Sorghum	nucleus	12.83	23.82
PGSC0003DMT400079004	Potato	cytosol	16.18	23.68
Os07t0620200-01	Rice	cytosol, mitochondrion, nucleus	12.43	23.48
KRH10601	Soybean	nucleus	15.51	23.34
HORVU4Hr1G039650.1	Barley	nucleus	12.3	23.12
GSMUA_Achr1P21390_001	Banana	cytosol	12.43	23.08
TraesCS5D01G252200.1	Wheat	cytosol, nucleus, plastid	16.18	22.96
TraesCS4D01G156000.1	Wheat	nucleus	12.3	22.94
TraesCS4B01G160100.1	Wheat	cytosol	12.3	22.94
KRH21766	Soybean	nucleus	15.24	22.85
TraesCS4A01G160900.1	Wheat	cytosol	12.17	22.75
HORVU5Hr1G069570.1	Barley	nucleus	16.58	22.71
Zm00001d047043_P001	Maize	nucleus	13.1	22.63
Zm00001d029409_P001	Maize	nucleus, peroxisome, plastid	11.9	22.47
HORVU5Hr1G055620.1	Barley	cytosol, nucleus, plastid	8.82	22.3
Zm00001d020762_P001	Maize	nucleus	13.1	22.27
TraesCS5B01G242900.1	Wheat	cytosol	15.51	22.01
Os03t0392400-01	Rice	nucleus	11.9	21.98
TraesCS5A01G245400.1	Wheat	cytosol, nucleus, plastid	15.51	21.97
HORVU2Hr1G030250.2	Barley	cytosol	11.36	21.85
Zm00001d022168_P001	Maize	cytosol, mitochondrion, peroxisome	12.43	21.04
KXG36712	Sorghum	cytosol	12.17	20.92
TraesCS2B01G191300.1	Wheat	cytosol	10.96	20.92
TraesCS2A01G165100.1	Wheat	cytosol	10.83	20.72
CDY46799	Canola	nucleus	10.7	20.41
TraesCS2D01G172200.1	Wheat	cytosol	10.56	20.2
Solyc01g105780.2.1	Tomato	nucleus	18.72	19.53
PGSC0003DMT400083794	Potato	nucleus	19.39	19.52
Solyc11g006140.1.1	Tomato	nucleus	14.57	18.32
PGSC0003DMT400073845	Potato	cytosol	15.91	18.25
Solyc11g006170.1.1	Tomato	nucleus	15.78	18.18

Protein Annotations

EnsemblPlants:CDY45473	EnsemblPlantsGene:GSBRNA2T00082110001	Gene3D:1.10.287.110	InterPro:DnaJ_domain	InterPro:IPR001623	InterPro:IPR036869
InterPro:J_dom_sf	PANTHER:PTHR45496	PFAM:PF00226	PFscan:PS50076	ProteinID:CDY45473	ProteinID:CDY45473.1
SEG:seg	SUPFAM:SSF46565	UniParc:UPI0004EBFD1A	UniProt:A0A078I8J1	MapMan:12.5.1.16.2	:

Description

BnaC09g12910DBnaC09g12910D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I8J1]

Coordinates

chrLK032626:-:154441..157016

Molecular Weight (calculated)

82195.4 Da

IEP (calculated)

7.340

GRAVY (calculated)

-0.802

Length

748 amino acids

Sequence
(BLAST)

001: MMSGGGNGGG GGDAERWLIT AQKLLLSGDL NGSKTYAIRA CEADHSLVDP AELILAVADT LLAGESRIRA DLPDWYAVLR LVRLTHNPEL VATQYSRLAV
101: LLNPSRNRFP YSDQAFRLIS DAWYVLSDPS RKALYDREVH LSQFGQLGQL GFQLLNQPPQ SPQHQEESPQ HQTVSYQSQQ LPFQLHQHSH FAQPPQQVMQ
201: SQPLQQFGQE QSEMIRSGGS SSSSGRDWRL PVEEERSINL NTATERVQPS RRFHDQERSS SGRSYEEASS QMAPPSTDLT WSSKPTPTSE PIALQSSGQF
301: QPPRSNQAAQ LSLLSLVSDQ PSVSQPNRSA QTHSVSKPQP VSKLFPMSQP SSNPLAGTGL REAPRPFAAS KPFSGSQSSQ KSKPFAASQP PTNSKPSAVS
401: QRSLNSNPFP VSEPPRTSNP FPASQPTQNA KASPLSQPQQ TSSNPFRVSQ QPPTSRPIPV SQPQPQPQPP PTSSNPFMVS QPTTASKPLP VSQQPSTSKP
501: MMVTQPPQQA FQSQPPEASG GPSTLPPIFN STQSFQQPPV STTPPSVPAV STTPSPVPVA STNPSPPQPT GVPNQSQHTE QTPSSDSIPK VPSFWTTCPY
601: CFVLFEYPNM YEESVLKCQT KSCRRAFQAV KVPSPPPVTE EDTYYCCWGF YPIGFAETVK IPDLPRGFPV YDIPRTAPKK ASRKVYYNED EDDDDYIDSD
701: PSEEEEDDDD DDDWHMNGTK RRKNVKQSKQ KASTKPRLGK PRKVIVVD

Best Arabidopsis Sequence Match ( AT1G62970.1 )
(BLAST)

001: MMSHGGGGGV SNGGGGDAER MLAQAEKLLL SGDLNGSKTY AIRACEADHS LVDHAELILA VADTLVAGES RIRGTTSDLP DWYAVLRLVR LTHNPELVAT
101: QYSRLAVLLN PSRNRYPYSE QAFRLISDAW YVLSDPSRKT LYDRELHLSQ FGQLGQLGFQ LFNQTPQSQS QSPQHHQQQS QSPQHPNQNQ TVSFQNQQLP
201: FQLHQPHFAQ AVQTQSQSQQ QRSQFDQQLL QEQQQASWRQ QVGQEHSSGS SGDWKRPVEE VRLINLNNAT ERVQSSRRFA EPERPPSRSF EGSSHRTPST
301: ELTWASKPTP VSEPVRHSEL VPWQYSEPAR QYQLSSRSSE AAQLSLLPSV SDSSHASQPT RSNQSHAVSK PQPVSKPHPP FPMSQPPPTS NPFPLSQPPS
401: NSKPFPMSQS SQNSKPFPVS QSSQKSKPLL VSQSSQRSKP LPVSQSLQNS NPFPVSQPSS NSKPFPVSQP QPASNPFPVS QPRPNSQPFS MSQPSSTARP
501: FPASQPPAAS KSFPISQPPT TSKPFVSQPP NTSKPMPVSQ PPTTSKPLPV SQPPPTFQST CPSQPPAASS SLSPLPPVFN STQSFQSPPV STTPSAVPEA
601: STIPSPPAPA PVAQPTHVFN QTPPPEQTPK SGAARTDSEP EVSSFWTTCP YCYVLYEYPI IYEESVLKCQ TKSCRRAYQA VKVPSPPPVA EEDSYYCCWG
701: FYPIGFSEVV TKIPVTGLHT KIPVSDLPKS APKKPSPKVY YYDDEEEDDD SYIGSDPSED DDDDDWLMNG TKRRKNVKQS KAKATTKPKR QKVIEVD

Arabidopsis Description

Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WQM3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.