CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31322	Canola	cytosol	52.3	54.96
AT5G64360.7	Thale cress	nucleus	35.97	30.39
CDX84519	Canola	nucleus	35.71	29.47
CDY58269	Canola	nucleus	35.46	27.69
KRH42098	Soybean	nucleus	31.63	27.25
CDY21586	Canola	cytosol	19.39	26.3
CDY69792	Canola	cytosol	19.13	25.6
VIT_03s0017g00300.t01	Wine grape	nucleus	31.38	25.31
KRH49811	Soybean	nucleus	28.83	23.99
KRH10601	Soybean	nucleus	28.83	22.74
KRH21766	Soybean	nucleus	28.83	22.65
CDY66640	Canola	cytosol	15.82	20.26
GSMUA_Achr3P06790_001	Banana	cytosol	16.33	19.69
CDY09423	Canola	cytosol	15.31	19.17
HORVU4Hr1G039650.1	Barley	nucleus	19.39	19.1
TraesCS4A01G160900.1	Wheat	cytosol	19.39	19.0
TraesCS4B01G160100.1	Wheat	cytosol	19.39	18.95
TraesCS4D01G156000.1	Wheat	nucleus	19.13	18.7
Zm00001d047214_P001	Maize	extracellular	18.88	18.64
EER92178	Sorghum	nucleus	18.62	18.11
Solyc07g007230.2.1	Tomato	nucleus	19.64	18.08
Zm00001d029409_P001	Maize	nucleus, peroxisome, plastid	17.6	17.42
GSMUA_Achr10P...	Banana	cytosol	18.62	17.34
Os07t0620200-01	Rice	cytosol, mitochondrion, nucleus	17.35	17.17
PGSC0003DMT400073845	Potato	cytosol	28.32	17.02
Solyc11g006170.1.1	Tomato	nucleus	28.06	16.95
Os03t0392400-01	Rice	nucleus	17.09	16.54
Solyc01g105780.2.1	Tomato	nucleus	28.83	15.76
Solyc11g006140.1.1	Tomato	nucleus	23.72	15.63
Zm00001d022168_P001	Maize	cytosol, mitochondrion, peroxisome	17.6	15.61
PGSC0003DMT400083794	Potato	nucleus	29.34	15.48
PGSC0003DMT400079004	Potato	cytosol	20.15	15.46
GSMUA_Achr1P21390_001	Banana	cytosol	15.82	15.38
KXG35797	Sorghum	nucleus	15.05	15.36
KXG36712	Sorghum	cytosol	16.84	15.17
HORVU2Hr1G030250.2	Barley	cytosol	15.05	15.17
TraesCS2D01G172200.1	Wheat	cytosol	15.05	15.09
TraesCS2B01G191300.1	Wheat	cytosol	15.05	15.05
TraesCS2A01G165100.1	Wheat	cytosol	14.8	14.83
Os09t0463700-01	Rice	nucleus	14.03	14.78
Zm00001d047043_P001	Maize	nucleus	16.07	14.55
Zm00001d020762_P001	Maize	nucleus	16.07	14.32
EES14021	Sorghum	nucleus	15.31	13.57
TraesCS5D01G252200.1	Wheat	cytosol, nucleus, plastid	16.33	12.14
HORVU5Hr1G055620.1	Barley	cytosol, nucleus, plastid	8.93	11.82
TraesCS5B01G242900.1	Wheat	cytosol	15.82	11.76
TraesCS5A01G245400.1	Wheat	cytosol, nucleus, plastid	15.56	11.55
HORVU5Hr1G069570.1	Barley	nucleus	15.56	11.17
CDY45473	Canola	nucleus	20.41	10.7
CDY45966	Canola	nucleus	20.15	10.62

Protein Annotations

EnsemblPlants:CDY46799	EnsemblPlantsGene:GSBRNA2T00086230001	PANTHER:PTHR45496	ProteinID:CDY46799	ProteinID:CDY46799.1	SEG:seg
UniParc:UPI0004EE6915	UniProt:A0A078IBR8	MapMan:35.2	:	:	:

Description

BnaC02g43070DBnaC02g43070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IBR8]

Coordinates

chrLK032686:-:17282..18590

Molecular Weight (calculated)

44275.2 Da

IEP (calculated)

9.905

GRAVY (calculated)

-0.896

Length

392 amino acids

Sequence
(BLAST)

001: MLQHISDPKS QISESQREEW KEDNGRRRQQ SGGGSVARNL REATRVLRPP RSQILRDPRM RIRPDPSRSC RLHPRDLRHP HRRRDPRDRL QPPRLVLRAP
101: PRAADSEPRA RRDSVPQARS PPQPLRQPPP LRRQGLRTRL RRLARPLRSD SKVLIRPRAA AESTRGASFW TACPYCFVLF EYAKDYEECV MKCRDCERAF
201: QAVRIQKPPV AVEGGGGGEE DVYFCSWSVF PLAFSGECNQ APRRWSPISP LIACPKKRKE PASPRVFYDD EDDDDVYVAI SDDDDEVAVD TGKGKGKGKE
301: PVVVSSHHHH HHHHNASRKR SGAGGGKSVG RLDLNVELSN DVEEAGGVSG RRESNREVDN IIEGIGFFEG LDEFLSSLPI LSVVGDDKIK AT

Best Arabidopsis Sequence Match ( AT5G64360.2 )
(BLAST)

001: MVGGRGGVGG GGGNRVEADQ WLVTSEKLLA SSDLQGAKTF AIRACEADPT RAEAADYILA ICDILLAGET RLGDSNLPDW YAVLRLGRLA QNPEHVATQY
101: RRLALLLNPS VNRLPFADRA LKIVSDAWFV LSDPFKKSFY DRELQLSQLG QSGFHPQTQS HQNFQWEPSS STAVYPPPRS QSQAGTSADP MATSFWTACP
201: YCFVLFEYPK AYEECTLKCQ ECRRAFQAVT IPKPPVDKKD DEDVYFCSWA LFPLGFSGEF QAPSWSPISP LFACPLQKLD GEPKKRKEPG PPRIYYDDDD
301: IYVAISDGDD AGDDGDWQDV VQVNKKTNVG KGKETYVRSN KKHGVEEVQN VESISSASNH AVSIASNAAA VGSSTGVMSK PGSYITRKRM GTGAKNLGRL
401: DLNVEFSNEV EEPGVAGGGN AGNGIGSNRE VDNMEGIGFF EGLDEFLNSL PILSVVGDDK IKAT

Arabidopsis Description

AT5G64360 protein [Source:UniProtKB/TrEMBL;Acc:Q9FMF3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.