Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY51752 | Canola | nucleus | 94.35 | 94.35 |
| AT3G03750.2 | Thale cress | nucleus | 75.3 | 71.47 |
| VIT_08s0056g01660.t01 | Wine grape | nucleus | 57.74 | 60.81 |
| KRG91550 | Soybean | nucleus | 53.57 | 52.17 |
| Os01t0772150-00 | Rice | nucleus | 51.49 | 51.18 |
| GSMUA_Achr8P20300_001 | Banana | plasma membrane | 48.81 | 50.77 |
| PGSC0003DMT400046255 | Potato | cytosol | 49.4 | 50.61 |
| HORVU3Hr1G075380.1 | Barley | nucleus | 49.4 | 50.15 |
| Zm00001d006369_P002 | Maize | nucleus | 50.6 | 50.15 |
| EES01534 | Sorghum | nucleus | 50.6 | 50.15 |
| TraesCS3D01G307900.1 | Wheat | nucleus | 49.4 | 50.0 |
| TraesCS3B01G342100.1 | Wheat | nucleus | 49.4 | 50.0 |
| TraesCS3A01G295200.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 49.11 | 49.7 |
| Solyc01g068370.2.1 | Tomato | nucleus | 48.81 | 48.09 |
| CDY04931 | Canola | cytosol, extracellular, nucleus | 5.95 | 26.32 |
| CDX92067 | Canola | nucleus | 23.21 | 16.53 |
| CDX74192 | Canola | nucleus | 22.92 | 16.49 |
| CDX78549 | Canola | nucleus | 25.6 | 14.24 |
| CDX70530 | Canola | nucleus | 25.3 | 14.1 |
| CDY49341 | Canola | nucleus | 23.21 | 14.0 |
| CDX96449 | Canola | nucleus | 26.79 | 13.7 |
| CDX84255 | Canola | nucleus | 29.17 | 13.59 |
| CDY31670 | Canola | nucleus | 28.87 | 13.53 |
| CDX68245 | Canola | nucleus | 26.79 | 13.51 |
| CDY59935 | Canola | nucleus | 26.49 | 13.51 |
| CDY11319 | Canola | nucleus | 25.89 | 13.49 |
| CDY11129 | Canola | nucleus | 26.79 | 13.45 |
| CDY61331 | Canola | nucleus | 26.79 | 13.45 |
| CDX98805 | Canola | nucleus | 26.19 | 13.44 |
| CDY17156 | Canola | nucleus | 22.62 | 13.43 |
| CDX98804 | Canola | nucleus | 24.4 | 13.38 |
| CDX80930 | Canola | nucleus | 25.6 | 13.35 |
| CDY19475 | Canola | nucleus | 21.43 | 13.04 |
| CDX73506 | Canola | nucleus | 24.4 | 12.95 |
| CDX78210 | Canola | nucleus | 24.11 | 12.84 |
| CDY26218 | Canola | nucleus | 26.19 | 12.61 |
| CDX89510 | Canola | nucleus | 27.68 | 12.27 |
| CDY25627 | Canola | nucleus | 26.79 | 12.06 |
| CDY14135 | Canola | nucleus | 25.89 | 12.05 |
| CDY66122 | Canola | nucleus | 25.6 | 12.04 |
| CDY37735 | Canola | nucleus, plastid | 22.32 | 11.77 |
| CDY23755 | Canola | nucleus | 22.32 | 11.77 |
| CDY14903 | Canola | nucleus | 22.32 | 11.72 |
| CDX94744 | Canola | nucleus | 22.02 | 10.8 |
| CDY56214 | Canola | nucleus | 25.3 | 10.72 |
| CDY22319 | Canola | nucleus | 22.02 | 10.5 |
| CDX96935 | Canola | nucleus | 22.92 | 9.82 |
| CDY42922 | Canola | plasma membrane, vacuole | 23.81 | 9.66 |
| CDY26221 | Canola | nucleus | 25.6 | 9.61 |
| CDY46064 | Canola | nucleus | 13.99 | 9.55 |
| CDX70182 | Canola | nucleus | 25.3 | 8.4 |
| CDY39668 | Canola | nucleus | 22.02 | 5.42 |
| CDY62521 | Canola | nucleus | 21.73 | 5.34 |
| CDY01852 | Canola | plasma membrane | 25.0 | 4.53 |
| CDY40567 | Canola | mitochondrion | 3.27 | 3.43 |
| CDY28971 | Canola | mitochondrion | 3.27 | 3.22 |
| CDY28970 | Canola | cytosol | 2.38 | 3.2 |
| CDY40566 | Canola | cytosol, plastid | 2.68 | 3.18 |
| CDX77745 | Canola | nucleus | 3.57 | 3.12 |
| CDY33518 | Canola | nucleus | 3.27 | 3.02 |
| CDY33517 | Canola | cytosol, mitochondrion, nucleus | 2.68 | 2.71 |
| CDX77744 | Canola | cytosol | 2.68 | 2.71 |
| Os04t0692900-01 | Rice | nucleus | 3.27 | 2.49 |
| CDY53193 | Canola | mitochondrion | 0.0 | 0.0 |
| CDX92068 | Canola | mitochondrion | 0.0 | 0.0 |
| CDX89821 | Canola | cytosol | 0.0 | 0.0 |
| CDY49340 | Canola | cytosol | 0.0 | 0.0 |
| CDX86631 | Canola | cytosol | 0.0 | 0.0 |
| CDY21127 | Canola | cytosol | 0.0 | 0.0 |
| CDY18235 | Canola | mitochondrion | 0.0 | 0.0 |
| CDX74191 | Canola | mitochondrion | 0.0 | 0.0 |
| CDY15508 | Canola | mitochondrion | 0.0 | 0.0 |
| CDY42923 | Canola | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| KEGG:00310+2.1.1.43 | MapMan:12.3.3.7 | Gene3D:2.170.270.10 | GO:A0A078II25 | UniProt:A0A078II25 | InterPro:AWS_dom |
| EnsemblPlants:CDY50660 | ProteinID:CDY50660 | ProteinID:CDY50660.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006464 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016740 |
| GO:GO:0018024 | GO:GO:0019538 | GO:GO:0032259 | GO:GO:0034968 | EnsemblPlantsGene:GSBRNA2T00097218001 | InterPro:IPR001214 |
| InterPro:IPR003616 | InterPro:IPR006560 | PFAM:PF00856 | PFscan:PS50280 | PFscan:PS50868 | PANTHER:PTHR44253 |
| InterPro:Post-SET_dom | InterPro:SET_dom | SMART:SM00317 | SMART:SM00570 | SUPFAM:SSF82199 | UniParc:UPI0004EF4B6F |
| SEG:seg | : | : | : | : | : |
Description
BnaC05g48060DBnaC05g48060D protein [Source:UniProtKB/TrEMBL;Acc:A0A078II25]
Coordinates
chrLK032929:+:61618..63242
Molecular Weight (calculated)
36580.9 Da
IEP (calculated)
7.972
GRAVY (calculated)
-0.144
Length
336 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKQSLPKKP RPLGESQFLR CAELILPWLN APELAAVSLT SKALTFISRS ITLRRSLDAA RSLESLPVPF LNAVDSKRYA DFAYTPFQIP ASSSPQPRQR
101: WGGGASDAPA SQFEMNVVGE SMYGCECERC EEGYCQCLSL AAGAEIANEC GSGCGCGSDC PNRVTQKGVL VRLKIVRDEK KGWCLCSDQL IKKGQFICEY
201: AGELLTTAEA RRRQTIYDKL RSTQLSFSSA LLVIREHLPS GQACLRINID ATRIGNVARF INHSCDGGNL STVLLRSTGA LLPRLCFFAA RDIVAGEELS
301: FSYGDVRLTP GRSAENKLNC SCGSSCCFGT LPCENT
101: WGGGASDAPA SQFEMNVVGE SMYGCECERC EEGYCQCLSL AAGAEIANEC GSGCGCGSDC PNRVTQKGVL VRLKIVRDEK KGWCLCSDQL IKKGQFICEY
201: AGELLTTAEA RRRQTIYDKL RSTQLSFSSA LLVIREHLPS GQACLRINID ATRIGNVARF INHSCDGGNL STVLLRSTGA LLPRLCFFAA RDIVAGEELS
301: FSYGDVRLTP GRSAENKLNC SCGSSCCFGT LPCENT
001: MQRLRESPPP KTRCLGEASD IIPAADRFLR CANLILPWLN PRELAVVAQT CKTLSLISKS LTIHRSLDAA RSLENISIPF HNSIDSQRYA YFIYTPFQIP
101: ASSPPPPRQW WGAAANECGS ESRPCFDSVS ESGRFGVSLV DESGCECERC EEGYCKCLAF AGMEEIANEC GSGCGCGSDC SNRVTQKGVS VSLKIVRDEK
201: KGWCLYADQL IKQGQFICEY AGELLTTDEA RRRQNIYDKL RSTQSFASAL LVVREHLPSG QACLRINIDA TRIGNVARFI NHSCDGGNLS TVLLRSSGAL
301: LPRLCFFAAK DIIAEEELSF SYGDVSVAGE NRDDKLNCSC GSSCCLGTLP CENT
101: ASSPPPPRQW WGAAANECGS ESRPCFDSVS ESGRFGVSLV DESGCECERC EEGYCKCLAF AGMEEIANEC GSGCGCGSDC SNRVTQKGVS VSLKIVRDEK
201: KGWCLYADQL IKQGQFICEY AGELLTTDEA RRRQNIYDKL RSTQSFASAL LVVREHLPSG QACLRINIDA TRIGNVARFI NHSCDGGNLS TVLLRSSGAL
301: LPRLCFFAAK DIIAEEELSF SYGDVSVAGE NRDDKLNCSC GSSCCLGTLP CENT
Arabidopsis Description
SUVR3Histone-lysine N-methyltransferase SUVR3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRV2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.