CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 1
endoplasmic reticulum 2
vacuole 1
plasma membrane 1
golgi 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
PProwler:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY48166	Canola	cytosol	91.67	4.33
CDX83032	Canola	endoplasmic reticulum, extracellular	100.0	2.58
CDX90699	Canola	endoplasmic reticulum	83.33	2.32
CDX77898	Canola	endoplasmic reticulum, golgi, plasma membrane	75.0	1.78
CDY21818	Canola	endoplasmic reticulum, golgi, plasma membrane	75.0	1.78
CDX68474	Canola	endoplasmic reticulum, golgi	66.67	1.65
CDX83028	Canola	endoplasmic reticulum, golgi	66.67	1.65
CDX68476	Canola	extracellular, golgi	50.0	1.24
CDX83029	Canola	extracellular, golgi	41.67	1.03
CDY69177	Canola	cytosol	16.67	0.84
GSMUA_Achr3P12520_001	Banana	extracellular, golgi	25.0	0.71
CDY69597	Canola	cytosol	16.67	0.57
Os09t0530275-00	Rice	endoplasmic reticulum, extracellular	16.67	0.46
CDY05401	Canola	endoplasmic reticulum	16.67	0.4
CDY23983	Canola	extracellular, golgi	16.67	0.4
CDX84818	Canola	endoplasmic reticulum, golgi	16.67	0.4
CDY29767	Canola	endoplasmic reticulum, plastid	16.67	0.4
CDX98656	Canola	endoplasmic reticulum, plastid	16.67	0.4
CDX78981	Canola	endoplasmic reticulum	16.67	0.4
CDY05453	Canola	endoplasmic reticulum	8.33	0.2
CDY52211	Canola	extracellular, golgi, plasma membrane	0.0	0.0
CDY05030	Canola	plastid	0.0	0.0

Protein Annotations

EnsemblPlants:CDY52210	EnsemblPlantsGene:GSBRNA2T00005160001	ProteinID:CDY52210	ProteinID:CDY52210.1	UniParc:UPI0004EEDCD1	UniProt:A0A078IM97
MapMan:35.2	:	:	:	:	:

Description

BnaC01g42550DBnaC01g42550D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IM97]

Coordinates

chrLK033066:-:65694..65732

Molecular Weight (calculated)

1267.6 Da

IEP (calculated)

6.093

GRAVY (calculated)

0.975

Length

12 amino acids

Sequence
(BLAST)

1: MLPLYAIASS TT

Best Arabidopsis Sequence Match ( AT3G48270.1 )
(BLAST)

001: MMIMFFLLCS IIFVVTIIIF RKQKRGKKRN TLPSPPGLPL IGNLHQLGRH PHRSLCSLSH RYGPLMLLHF GRVPVLVVSS AELARDVLKT HDRVFASRPR
101: SKIFEKLLYD KHDVASAPYG EYWRQMKSVC VLHLFSNKMV RSFREVREEE ISLMMEKIRK SISLPVNLSK ILVSLTNDVI CKVALGRKYG GETDFKELME
201: RLNKLLGTFS VGSYVPWLAW IDWIRGLDCQ LEKTANDVDK FFERVVQDHV DGNRDMTDFV DVLLAIQRDK TVGFEINRVS IKAIVMNVFV GGTDTSSTLM
301: EWAMTELLRH PKCLKRLQEE VRTICKDKSS VSEEEIQNMS YLKAVIKEAL RLHPPLPLMV PHESTQDVRL GDHHIPAGTQ VLINAWAIGR EAATWGPDVE
401: EFRPERHLDS SVDYRGQAFE LIPFGSGRRI CPAISFAVVL NEVVLANLVH RFDWRLSVES TEDQTEVAES TGIAIHRMFP LYAIASNTT

Arabidopsis Description

CYP71A26Cytochrome P450 71A26 [Source:UniProtKB/Swiss-Prot;Acc:Q9STK7]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.