CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX99091	Canola	cytosol	96.41	93.69
CDY71274	Canola	extracellular, mitochondrion	31.45	61.95
AT3G46840.1	Thale cress	extracellular, plasma membrane	76.41	60.57
CDY14583	Canola	plastid	40.34	59.45
AT3G46850.1	Thale cress	extracellular, plasma membrane, vacuole	74.53	59.24
VIT_06s0004g05590.t01	Wine grape	cytosol	52.65	52.38
CDY32678	Canola	extracellular, plasma membrane	58.97	48.25
CDY42952	Canola	plastid	55.9	48.23
CDY02839	Canola	vacuole	57.44	47.73
CDY32681	Canola	extracellular	57.44	47.59
CDX71132	Canola	extracellular, vacuole	59.49	47.15
CDY32679	Canola	extracellular	57.27	47.05
CDY32660	Canola	extracellular	57.78	47.01
CDY33016	Canola	extracellular, plasma membrane	58.97	46.88
CDY14584	Canola	extracellular, vacuole	57.27	46.79
CDX80297	Canola	extracellular, plasma membrane	58.8	46.74
CDY02841	Canola	extracellular, plasma membrane	56.92	46.7
CDX88685	Canola	vacuole	58.46	46.66
CDY32677	Canola	extracellular, plasma membrane	56.58	46.55
CDY02840	Canola	extracellular, plasma membrane, vacuole	56.07	46.33
CDY02868	Canola	endoplasmic reticulum, extracellular, plasma membrane	54.19	46.28
CDY02843	Canola	extracellular, plasma membrane	56.07	46.07
CDY54174	Canola	vacuole	57.44	45.59
CDY50278	Canola	plastid	52.65	45.03
CDX88686	Canola	vacuole	52.99	44.86
CDX71131	Canola	vacuole	52.65	44.57
CDY47801	Canola	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	52.99	44.48
VIT_06s0009g01220.t01	Wine grape	cytosol	52.99	44.41
VIT_06s0004g04830.t01	Wine grape	cytosol	52.48	43.67
CDY17671	Canola	cytosol, nucleus, plastid	50.94	43.44
VIT_06s0004g05620.t01	Wine grape	cytosol	24.44	43.07
CDX77828	Canola	cytosol	50.43	43.07
CDY17670	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	51.45	42.82
VIT_06s0004g05630.t01	Wine grape	cytosol	53.33	42.62
CDX80304	Canola	cytosol	51.45	41.63
VIT_06s0004g05610.t01	Wine grape	extracellular, plasma membrane	50.09	41.38
VIT_06s0009g01260.t01	Wine grape	extracellular, vacuole	50.26	41.23
HORVU7Hr1G029160.1	Barley	cytosol, vacuole	42.73	39.49
GSMUA_Achr7P12250_001	Banana	cytosol	43.08	38.47
CDY33010	Canola	extracellular	43.25	38.33
TraesCS7B01G043900.1	Wheat	cytosol	42.91	36.38
GSMUA_Achr4P17500_001	Banana	extracellular	43.59	35.56
KXG34604	Sorghum	extracellular, vacuole	44.96	35.11
EER98135	Sorghum	extracellular	43.76	34.41
Zm00001d019065_P001	Maize	extracellular, plasma membrane, vacuole	43.42	34.23
OQU88639	Sorghum	endoplasmic reticulum, extracellular	43.08	34.19
Zm00001d019066_P001	Maize	plasma membrane	42.73	33.6
CDY32680	Canola	extracellular, plasma membrane, vacuole	20.85	33.24
CDY07233	Canola	extracellular, plasma membrane	41.88	32.45
CDY65868	Canola	cytosol, mitochondrion	35.56	30.95
Zm00001d019064_P001	Maize	plasma membrane	38.8	30.84
CDX77071	Canola	extracellular	39.15	30.13
CDY08282	Canola	extracellular	21.54	30.0
CDY44210	Canola	extracellular	38.8	29.4
CDY57477	Canola	extracellular	38.97	29.19
CDX98690	Canola	cytosol	34.7	29.17
CDY01388	Canola	extracellular, plasma membrane, vacuole	37.09	27.93
CDX92763	Canola	extracellular, plasma membrane	36.58	27.9
CDX91186	Canola	extracellular, plasma membrane	36.24	27.89
CDY67954	Canola	extracellular, golgi	36.75	27.74
CDY42743	Canola	extracellular, plasma membrane	36.41	27.66
CDX93811	Canola	plasma membrane	35.38	27.53
CDY25259	Canola	endoplasmic reticulum, extracellular, plasma membrane	34.7	27.36
CDX93808	Canola	extracellular, vacuole	34.53	27.01
CDX84657	Canola	extracellular, golgi	34.7	26.75
CDX94251	Canola	extracellular	34.7	26.68
CDX79081	Canola	extracellular, plasma membrane, vacuole	34.19	26.63
CDX93810	Canola	plasma membrane	33.85	26.4
CDX94043	Canola	plasma membrane	34.87	26.39
CDX86874	Canola	endoplasmic reticulum, extracellular, golgi	33.68	26.37
Zm00001d020995_P001	Maize	cytosol, plastid, vacuole	19.49	26.33
CDX99526	Canola	endoplasmic reticulum, extracellular, golgi	33.85	26.29
CDY70485	Canola	extracellular, vacuole	32.99	26.29
CDX82843	Canola	extracellular, plasma membrane, vacuole	34.36	26.24
CDY49641	Canola	extracellular, golgi, plastid	33.16	26.11
CDY36894	Canola	extracellular	23.93	25.97
CDX94252	Canola	extracellular	31.11	25.89
CDX98693	Canola	extracellular, plasma membrane, vacuole	33.85	25.88
CDY07491	Canola	extracellular, golgi	33.5	25.82
CDY07492	Canola	extracellular	33.16	25.63
CDY49640	Canola	extracellular	32.99	25.5
CDX94044	Canola	extracellular	30.43	24.48
GSMUA_Achr10P...	Banana	extracellular	11.28	24.35
CDY67543	Canola	cytosol	37.09	24.16
CDX94033	Canola	endoplasmic reticulum, extracellular, plasma membrane	32.48	23.78
CDX94032	Canola	extracellular, vacuole	31.79	23.72
CDY58475	Canola	extracellular, vacuole	31.62	23.66
CDY61569	Canola	extracellular, plasma membrane	34.19	16.99
CDY14582	Canola	extracellular, plasma membrane	6.5	14.73
CDY54842	Canola	extracellular, golgi, plasma membrane	34.19	14.04
GSMUA_Achr10P...	Banana	extracellular	17.61	10.35

Protein Annotations

Gene3D:2.60.40.2310	Gene3D:3.40.50.200	Gene3D:3.50.30.30	MapMan:35.1	GO:A0A078IVL6	UniProt:A0A078IVL6
EnsemblPlants:CDY54021	ProteinID:CDY54021	ProteinID:CDY54021.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004252
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00011991001
InterPro:IPR036852	PFAM:PF00082	PRINTS:PR00723	PANTHER:PTHR10795	PANTHER:PTHR10795:SF518	InterPro:Peptidase_S8/S53_dom
InterPro:Peptidase_S8/S53_dom_sf	InterPro:Peptidase_S8_subtilisin-rel	SUPFAM:SSF52743	UniParc:UPI0004EF46C5	SEG:seg	:

Description

BnaCnng26040DBnaCnng26040D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078IVL6]

Coordinates

chrLK033265:-:67062..69326

Molecular Weight (calculated)

61864.0 Da

IEP (calculated)

9.585

GRAVY (calculated)

0.014

Length

585 amino acids

Sequence
(BLAST)

001: EKWKGVCQGS KHFSCNNLNV DDVVVVYSKV IGARNYTPRI KGVPHSAIDN MGHGSHTAST AAGNAVKDVS FYGLANGTAR GGVPAARIAV YKVCDPGNKG
101: CTTDGILSAF DDAIGDNVDL ITISIGDDKG LPFHEDTIAI GAFHAMAKGI LTVNSAGNSG PELSTVTSVA PWIFTVGASN TNRAFVTKAV LGDGKTVVGR
201: SVNAFDLKGT KYPVVYGKTA SSNCDAASAA FCSPGCLDRK LVSGKIVLCD SGQNVKEAKY MGAVASIARS RREDTALVFS FPVTVLSGPA YDVVLSYINS
301: TKNPIAAVLK SETIFNQKAP VIASYSSRGP NPIIPDILKP DITSPGSEII AAYSPSVPPS IADTRHLKYS ILSETSMSCP HVAGVAAYIK TFHPRWSPSM
401: IQSAIMTTAW PVNASTLMPE FAYGAGHVNP LAAVHPGLVY EANKSDYIAF LCGLKYTGKN LRLISGESRA CTKAQSKSLP RNLNYPSMTA QVPATKPFKV
501: TFRRTVTNVG TSNTTYKAKV VGSKLNVEVI PDVFSLKSMH EKKSFTVTVS GKGLGAGELV ASSQLIWSDG FHFVRSPIVV YAPNW

Best Arabidopsis Sequence Match ( AT3G46840.1 )
(BLAST)

001: MTKPAVSYCL LSCIFALLVV SFASADKDDQ DKQEYIVYMG ALPARVDYMP MSHHTSILQD VTGESSIEDR LVRNYKRSFN GFAARLTKSE REILASMDEV
101: VSVFPNKKLK LQTTTSWNFM GLKESKRTKR NTIIESDTII GVIDSGIYPE SDSFSGKGFG PPPKKWKGVC KGGKNFTWNN KLIGARYYTP KLEGFPESAR
201: DYMGHGSHTA STAAGNAVKH VSFYGLGNGT ARGGVPAARI AVYKVCDPGV DGCTTDGILA AFDDAIADKV DIITISIGGD NSSPFEEDPI AIGAFHAMAK
301: GILIVNSAGN SGPEPSTVAS IAPWMFTVAA SNTNRAFVTK VVLGNGKTVG RSVNSFDLNG KKYPLVYGKS ASSSCGAASA GFCSPGCLDS KRVKGKIVLC
401: DSPQNPDEAQ AMGAIASIVR SHRTDVASIF SFPVSVLLED DYNTVLSYMN STKNPKAAVL KSETIFNQRA PVVASYFSRG PNTIIPDILK PDITAPGSEI
501: VAAYSPDAPP SISDTRRVKY SVDTGTSMSC PHVAGVAAYL KSFHPRWSPS MIQSAIMTTA WPMNASTSPF NELAEFAYGA GHVDPITAIH PGLVYEANKS
601: DHIAFLCGLN YTAKNLRLIS GDSSSCTKEQ TKSLPRNLNY PSMTAQVSAA KPFKVIFRRT VTNVGRPNAT YKAKVVGSKL KVKVVPAVLS LKSLYEKKSF
701: TVTASGAGPK AENLVSAQLI WSDGVHFVRS PIVVYATN

Arabidopsis Description

SBT4.5Subtilisin-like protease SBT4.5 [Source:UniProtKB/Swiss-Prot;Acc:F4JA91]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.