Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra033600.1-P | Field mustard | endoplasmic reticulum | 49.07 | 84.29 |
| CDX72715 | Canola | nucleus | 78.73 | 81.31 |
| CDY12124 | Canola | nucleus | 64.37 | 58.57 |
| CDX90315 | Canola | nucleus | 62.31 | 56.42 |
| CDX87111 | Canola | nucleus | 51.68 | 51.3 |
| CDY16866 | Canola | vacuole | 51.31 | 50.55 |
| AT4G39160.2 | Thale cress | nucleus | 51.12 | 43.91 |
| HORVU6Hr1G080290.6 | Barley | nucleus | 13.81 | 28.03 |
| TraesCS6D01G309500.4 | Wheat | nucleus | 13.25 | 26.69 |
| TraesCS6B01G361300.1 | Wheat | nucleus | 13.06 | 26.32 |
| GSMUA_Achr2P23110_001 | Banana | nucleus | 6.72 | 25.17 |
| PGSC0003DMT400045728 | Potato | nucleus | 27.61 | 20.73 |
| KRH34776 | Soybean | nucleus | 19.03 | 20.48 |
| Solyc02g081640.2.1 | Tomato | nucleus | 25.75 | 19.57 |
| KRG92007 | Soybean | nucleus | 16.98 | 17.53 |
| TraesCS6A01G330400.1 | Wheat | nucleus, plastid | 15.67 | 16.7 |
| KXG24287 | Sorghum | nucleus | 23.88 | 16.41 |
| Zm00001d017507_P001 | Maize | nucleus | 14.55 | 14.69 |
| Zm00001d035113_P001 | Maize | nucleus | 22.76 | 14.56 |
| TraesCS1D01G314900.1 | Wheat | nucleus | 20.52 | 13.96 |
| TraesCS1A01G314400.2 | Wheat | nucleus | 20.34 | 13.83 |
| HORVU1Hr1G067100.2 | Barley | nucleus | 20.15 | 13.72 |
| TraesCS1B01G326700.2 | Wheat | nucleus | 20.15 | 13.71 |
| OQU75762 | Sorghum | nucleus | 20.52 | 13.63 |
| KRH77688 | Soybean | nucleus | 23.32 | 13.37 |
| KRH27726 | Soybean | nucleus | 22.2 | 12.55 |
| VIT_03s0038g04460.t01 | Wine grape | nucleus | 24.44 | 12.44 |
| Zm00001d017505_P003 | Maize | plastid | 22.76 | 10.74 |
| Os03t0840500-00 | Rice | cytosol, nucleus | 7.65 | 9.6 |
Protein Annotations
| MapMan:15.4.3.2 | MapMan:15.5.2.2 | GO:A0A078J118 | UniProt:A0A078J118 | EnsemblPlants:CDY56766 | ProteinID:CDY56766 |
| ProteinID:CDY56766.1 | GO:GO:0000126 | GO:GO:0001026 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006359 | GO:GO:0006383 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| EnsemblPlantsGene:GSBRNA2T00020060001 | InterPro:Homeobox-like_sf | PFAM:PF15963 | PANTHER:PTHR22929 | InterPro:SANT/Myb | SMART:SM00717 |
| SUPFAM:SSF46689 | InterPro:TFIIIB_B'' | UniParc:UPI0004EDE08B | SEG:seg | : | : |
Description
BnaA06g40770DBnaA06g40770D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J118]
Coordinates
chrLK033516:-:45627..48852
Molecular Weight (calculated)
60064.9 Da
IEP (calculated)
4.457
GRAVY (calculated)
-1.088
Length
536 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLDFDDQPA AAPAARAGAK FKPKGRPHPK KKHLSLSTSQ PTTLSTLLPS EILSTTQSQD PVSLHDVSTI VPDSGGLIDQ STVGTISKEN VFSEVLSVLR
101: PCSNVNCEGK RCDNGKEAAP ANPPDDPKSL DSAAFVTQET DEEEECHWNM ETLNIVQEEG ITTAYEQHTG KFQPKPRLQD AVIEEPESHY SVDHTTAANQ
201: SKVMVIVTNT VPGGEEHEDH VIGVGNGLGN TVEEEEETRS ERESKKGKSK RARKQKTTSE EEPNKSPQKK KFKHSSRQKR NRTLEKELLE TPDDEIKFLP
301: IKDMLRLVEY REWLEKKEAK GAPVVPPAQE SNTNASEDNH YYSQGFDQED EFGMLETENQ ENNVVKPDSP VNYQTYMKKT PRTRWSKQDT ELFYEGIQDF
401: GGDLSMVQLL FSDRTHQQIK LKFKLEERRN PLKLNDALST RPKDLTRFHT LIKKLQQEAP AERAGEEEGE AGEEAETTTD VPENEEPAKS EETGDGVAGV
501: KEPDGGDIEN NGGDECEDNE GDDDDDEFWN SYKSDM
101: PCSNVNCEGK RCDNGKEAAP ANPPDDPKSL DSAAFVTQET DEEEECHWNM ETLNIVQEEG ITTAYEQHTG KFQPKPRLQD AVIEEPESHY SVDHTTAANQ
201: SKVMVIVTNT VPGGEEHEDH VIGVGNGLGN TVEEEEETRS ERESKKGKSK RARKQKTTSE EEPNKSPQKK KFKHSSRQKR NRTLEKELLE TPDDEIKFLP
301: IKDMLRLVEY REWLEKKEAK GAPVVPPAQE SNTNASEDNH YYSQGFDQED EFGMLETENQ ENNVVKPDSP VNYQTYMKKT PRTRWSKQDT ELFYEGIQDF
401: GGDLSMVQLL FSDRTHQQIK LKFKLEERRN PLKLNDALST RPKDLTRFHT LIKKLQQEAP AERAGEEEGE AGEEAETTTD VPENEEPAKS EETGDGVAGV
501: KEPDGGDIEN NGGDECEDNE GDDDDDEFWN SYKSDM
001: MDLDFDDQPS DHAAPAVRAG ARFKPKGRPQ PKKKQVSLST TQTTLSPDVA QEKLSTQSED LVPLDGSSEI PSNALPSETN VPDSGSINKS TIGTLSEENE
101: DAFPRGVHWS VKPSILRACN NVNLVGNRRD DGIEATTSFP DDPRTQDSAI FGDYVTPETG ADEGRVDMET LDIVQEEGTT SSYVQHTGKL QPKPRLLETV
201: VEEPEPHYSA GDTGYFPMGT NESEFMANVE SRNGFSTYED LQEEELNIPE APRETVGEME AQNASGGWEQ EEQGVSPCIN NTVTGEEENC MGNTVEEQSK
301: RESKTGKSKR ATSRKRKKTS EEPNKSSEKT EQKKFKHSSR RQKRTLEKEL LETPDHEIRS LPLRDMLRLV EYKEWMQKKE AKGAGVQPSQ ESNNMNGSGS
401: QYHSQGFDEE DEFGDFGIES SEYQENNVVK PDSPVNYQTY MNKTSRTRWS KEDTELFYEG IQEFGSNLSM IQQLFPERTR EQMKLKFKLE ERRNPLKLND
501: ALSSRSKHFT HFKNVIKKLQ QEAAAAKEGE EEEEAGAEAE TTDVPENEEP EKSEETERAS DGVAAGVKES DGGDVENGVR SDGGDECDDD EDFWNSYKSD
601: M
101: DAFPRGVHWS VKPSILRACN NVNLVGNRRD DGIEATTSFP DDPRTQDSAI FGDYVTPETG ADEGRVDMET LDIVQEEGTT SSYVQHTGKL QPKPRLLETV
201: VEEPEPHYSA GDTGYFPMGT NESEFMANVE SRNGFSTYED LQEEELNIPE APRETVGEME AQNASGGWEQ EEQGVSPCIN NTVTGEEENC MGNTVEEQSK
301: RESKTGKSKR ATSRKRKKTS EEPNKSSEKT EQKKFKHSSR RQKRTLEKEL LETPDHEIRS LPLRDMLRLV EYKEWMQKKE AKGAGVQPSQ ESNNMNGSGS
401: QYHSQGFDEE DEFGDFGIES SEYQENNVVK PDSPVNYQTY MNKTSRTRWS KEDTELFYEG IQEFGSNLSM IQQLFPERTR EQMKLKFKLE ERRNPLKLND
501: ALSSRSKHFT HFKNVIKKLQ QEAAAAKEGE EEEEAGAEAE TTDVPENEEP EKSEETERAS DGVAAGVKES DGGDVENGVR SDGGDECDDD EDFWNSYKSD
601: M
Arabidopsis Description
Homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JVA4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.