CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra024289.1-P	Field mustard	nucleus	86.45	94.55
CDX84519	Canola	nucleus	80.88	85.47
AT5G64360.7	Thale cress	nucleus	60.36	65.3
CDY31322	Canola	cytosol	43.43	58.45
CDY21586	Canola	cytosol	29.68	51.56
CDY69792	Canola	cytosol	29.68	50.85
VIT_03s0017g00300.t01	Wine grape	nucleus	37.45	38.68
KRH42098	Soybean	nucleus	34.06	37.58
KRH49811	Soybean	nucleus	34.66	36.94
CDY66640	Canola	cytosol	22.31	36.6
CDY09423	Canola	cytosol	22.11	35.46
CDY46799	Canola	nucleus	27.69	35.46
KRH21766	Soybean	nucleus	33.86	34.07
KRH10601	Soybean	nucleus	32.67	33.0
GSMUA_Achr3P06790_001	Banana	cytosol	19.52	30.15
Solyc07g007230.2.1	Tomato	nucleus	24.7	29.11
Zm00001d047214_P001	Maize	extracellular	22.11	27.96
HORVU4Hr1G039650.1	Barley	nucleus	21.91	27.64
EER92178	Sorghum	nucleus	22.11	27.54
TraesCS4D01G156000.1	Wheat	nucleus	21.91	27.43
TraesCS4B01G160100.1	Wheat	cytosol	21.71	27.18
GSMUA_Achr10P...	Banana	cytosol	22.71	27.08
TraesCS4A01G160900.1	Wheat	cytosol	21.12	26.5
Zm00001d029409_P001	Maize	nucleus, peroxisome, plastid	20.52	26.01
Os03t0392400-01	Rice	nucleus	20.52	25.43
Solyc11g006170.1.1	Tomato	nucleus	32.87	25.42
Os07t0620200-01	Rice	cytosol, mitochondrion, nucleus	19.92	25.25
PGSC0003DMT400073845	Potato	cytosol	32.67	25.15
GSMUA_Achr1P21390_001	Banana	cytosol	19.52	24.32
PGSC0003DMT400079004	Potato	cytosol	24.5	24.07
Solyc01g105780.2.1	Tomato	nucleus	34.06	23.85
TraesCS2B01G191300.1	Wheat	cytosol	18.13	23.21
PGSC0003DMT400083794	Potato	nucleus	34.26	23.15
HORVU2Hr1G030250.2	Barley	cytosol	17.73	22.88
Os09t0463700-01	Rice	nucleus	16.73	22.58
TraesCS2A01G165100.1	Wheat	cytosol	17.53	22.51
Zm00001d047043_P001	Maize	nucleus	19.32	22.4
Solyc11g006140.1.1	Tomato	nucleus	26.49	22.35
TraesCS2D01G172200.1	Wheat	cytosol	17.33	22.25
KXG36712	Sorghum	cytosol	18.92	21.84
Zm00001d022168_P001	Maize	cytosol, mitochondrion, peroxisome	19.12	21.72
EES14021	Sorghum	nucleus	18.73	21.27
KXG35797	Sorghum	nucleus	16.14	21.09
HORVU5Hr1G055620.1	Barley	cytosol, nucleus, plastid	12.35	20.95
CDY45473	Canola	nucleus	28.29	18.98
CDY45966	Canola	nucleus	27.69	18.68
Zm00001d020762_P001	Maize	nucleus	16.14	18.41
TraesCS5D01G252200.1	Wheat	cytosol, nucleus, plastid	17.73	16.89
TraesCS5B01G242900.1	Wheat	cytosol	17.33	16.51
HORVU5Hr1G069570.1	Barley	nucleus	17.53	16.12
TraesCS5A01G245400.1	Wheat	cytosol, nucleus, plastid	16.93	16.1

Protein Annotations

Gene3D:1.10.287.110	MapMan:12.5.1.16.2	UniProt:A0A078IZY7	EnsemblPlants:CDY58269	ProteinID:CDY58269	ProteinID:CDY58269.1
InterPro:DnaJ_domain	EnsemblPlantsGene:GSBRNA2T00023335001	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	PFAM:PF00226
PFscan:PS50076	PANTHER:PTHR45496	SMART:SM00271	SUPFAM:SSF46565	UniParc:UPI0004EDEB5F	SEG:seg

Description

BnaAnng15130DBnaAnng15130D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IZY7]

Coordinates

chrLK033651:+:38003..40937

Molecular Weight (calculated)

55389.4 Da

IEP (calculated)

7.416

GRAVY (calculated)

-0.503

Length

502 amino acids

Sequence
(BLAST)

001: MNTNFQYLNE IKAKPENHGL MLSQISDQRP TKILRIKLGR NNLRVRGDMV GGGVGGRGGN KAEANQLLVT SEKLLSSSDF QGAKASAIRA CKSDPTLAEA
101: ADSILTICDV LIASEIRLGD SKLPDWYAAL RLGRLAQNPE HVATQYRRLA LLLNPSVNRF PLADQAFKVV SDAWHVLSDP SRKSLYDQEV QLSQLVQPQK
201: QRFVWKPSQS TTNVVVAQQT PSVAQPPRRS DPMATSFWTA CPYCFVLFEY PKAYEECVLR CQDCRRAFQA VTIQKPPVEG KGEDVYFCSW SVFPLGFSGE
301: FKAPSWSPIS PLIACPLQMV DDERTRKKRK EPAPPRFFYD DDDIYVAISD DDHEENGPNE LQAKNNVGKG KEKLVRSNKK HGSEKAGRGI QHVESIGGAS
401: NHAASIASYV TPVGSSSMSK PMSSRKRTGT EAKNLGRLDL NVEFSNEVEE PAVAGGRNEG NGLGSNREVD NMEGIGFFED LDEFLSSLPI FSVDGDDKIK
501: AT

Best Arabidopsis Sequence Match ( AT5G64360.4 )
(BLAST)

001: MVGGRGGVGG GGGNRVEADQ WLVTSEKLLA SSDLQGAKTF AIRACEADPT RAEAADYILA ICDILLAGET RLGDSNLPDW YAVLRLGRLA QNPEHVATQY
101: RRLALLLNPS VNRLPFADRA LKIVSDAWFV LSDPFKKSFY DRELQLSQLG QSGFHPQTQS HQNFQWEPSS STAVYPPPRS QSQAGTSADP MATSFWTACP
201: YCFVLFEYPK AYEECTLKCQ ECRRAFQAVT IPKPPVDKKD DEDVYFCSWA LFPLGFSGEF QAPSWSPISP LFACPLQKLD GEPKKRKEPG PPRIYYDDDD
301: IYVAISDGDD AGDDGDWQDV VQVNKKTNVG KGKETYVRSN KKHGVEEVQN VESISSASNH AVSIASNAAA VGSSTGVMSK PGSYITRKRM GTGAKNLGRL
401: DLNVEFSNEV EEPGVAGGGN AGNGIGSNRE VDNMEGIGFF EGLDEFLNSL PILSVVGDDK IKAT

Arabidopsis Description

AT5G64360 protein [Source:UniProtKB/TrEMBL;Acc:Q9FMF3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.