CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plasma membrane 6
extracellular 7
endoplasmic reticulum 5
golgi 5
vacuole 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra037084.1-P	Field mustard	extracellular	88.56	80.08
CDY06505	Canola	extracellular	66.53	75.48
CDY22735	Canola	extracellular	63.98	63.98
AT4G15160.1	Thale cress	extracellular	69.07	59.27
CDY09061	Canola	extracellular	63.98	58.98
CDY22936	Canola	plasma membrane	72.03	58.42
VIT_03s0017g02260.t01	Wine grape	extracellular	47.03	56.92
CDY47794	Canola	extracellular	52.97	56.31
GSMUA_Achr2P01500_001	Banana	endoplasmic reticulum, extracellular	33.05	50.32
VIT_03s0017g02200.t01	Wine grape	extracellular	43.22	48.8
TraesCS7D01G020100.1	Wheat	cytosol, plastid	22.88	48.65
TraesCS2B01G444500.1	Wheat	extracellular	33.05	47.56
TraesCS2D01G422700.1	Wheat	extracellular	32.63	46.95
TraesCS2A01G424800.1	Wheat	extracellular	32.2	46.34
TraesCS7A01G024100.1	Wheat	plastid	28.39	44.97
TraesCS2D01G422800.1	Wheat	extracellular, plastid	35.59	43.08
TraesCS7D01G020000.1	Wheat	plastid	25.42	42.25
Zm00001d002347_P001	Maize	extracellular	25.85	42.07
CDY39502	Canola	extracellular	46.61	40.74
Os06t0168700-01	Rice	plastid	42.37	40.65
CDY19310	Canola	extracellular	45.76	40.0
Zm00001d026282_P001	Maize	extracellular	27.12	39.75
Os04t0612500-01	Rice	endoplasmic reticulum, plasma membrane, vacuole	14.83	39.33
OQU82307	Sorghum	extracellular, plasma membrane	24.15	38.51
CDY12951	Canola	extracellular	44.49	38.04
HORVU7Hr1G027440.2	Barley	extracellular	45.34	37.81
KRG90032	Soybean	extracellular	51.69	37.2
TraesCS7A01G024200.1	Wheat	plastid	34.32	36.49
CDY70376	Canola	extracellular	43.64	36.01
HORVU2Hr1G099450.1	Barley	endoplasmic reticulum	29.24	35.94
CDX81428	Canola	endoplasmic reticulum, plasma membrane	38.56	35.55
CDY18576	Canola	endoplasmic reticulum, plasma membrane	40.25	33.93
KRH17654	Soybean	extracellular	52.97	32.55
EER89284	Sorghum	endoplasmic reticulum, vacuole	44.49	32.41
PGSC0003DMT400035207	Potato	extracellular	53.39	32.31
TraesCS7B01G031800.1	Wheat	extracellular	41.95	30.84
HORVU2Hr1G099370.2	Barley	mitochondrion	34.32	30.0
HORVU2Hr1G099470.5	Barley	extracellular	37.71	18.78

Protein Annotations

Gene3D:1.10.110.10	MapMan:35.1	UniProt:A0A078J850	InterPro:Bifun_inhib/LTP/seed_sf	EnsemblPlants:CDY59805	ProteinID:CDY59805
ProteinID:CDY59805.1	EnsemblPlantsGene:GSBRNA2T00027744001	InterPro:Hydrophob_seed	PFAM:PF14547	PRINTS:PR01217	PFscan:PS51257
PANTHER:PTHR31731	PANTHER:PTHR31731:SF52	SUPFAM:SSF47699	SignalP:SignalP-noTM	UniParc:UPI0004EE32CC	SEG:seg

Description

BnaA05g35360DBnaA05g35360D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J850]

Coordinates

chrLK033807:-:6047..7173

Molecular Weight (calculated)

24586.5 Da

IEP (calculated)

8.785

GRAVY (calculated)

-0.216

Length

236 amino acids

Sequence
(BLAST)

001: MGFLHKQYHS FVILLLFGFL AISYACECSD PPKPSPPPPY TPCPPTAKPP PPPTPSPPPP YVKPPPPPTP SPPPPTLSAP PPYVKPPPPP TPSPPPPYPP
101: PPPTPSPPPP YVKPPPPPTP SPPPPPTPCP PPPPAPTPKP KTCSINVLKL GACVDVLGGL IHVGLGKGYA KTKCCPVLDG LVGLDAAVCL CSSIRAKLLN
201: IDLVIPIALE LLIDCGKTPP RDFKCPAPQQ RNPLLG

Best Arabidopsis Sequence Match ( AT3G22120.2 )
(BLAST)

001: MYLLTHSFQK PKPSFQKMGS RSQNLSFLVL LLLGFVAVSY ACDCTPPKPS PAPHKPPKHP VKPPKPPAVK PPKPPAVKPP TPKPPTVKPH PKPPTVKPHP
101: KPPTVKPHPK PPTVKPPHPK PPTKPHPHPK PPIVKPPTKP PPSTPKPPTK PPPSTPKPPT TKPPPSTPKP PHHKPPPTPC PPPTPTPTPP VVTPPTPTPP
201: VITPPTPTPP VVTPPTPTPP VITPPTPTPP VITPPTPTPP VVTPPTPTPP VVTPPTPTPP TPIPETCPID TLKLGACVDV LGGLIHIGLG KSHAKAECCP
301: VLGGLLDLDA AVCLCTTIKL KLLNIDLVLP IALELLLDCG KTPPSDFKCP A

Arabidopsis Description

CWLPCell wall-plasma membrane linker protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSA3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.