Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plasma membrane 1
- extracellular 1
- endoplasmic reticulum 1
- golgi 1
- vacuole 1
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G73100.1 | CDY21586 | AT5G09540.1 | 21798944 |
| AT1G73100.1 | CDY69792 | AT5G09540.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX96449 | Canola | nucleus | 94.23 | 94.52 |
| Bra016018.1-P | Field mustard | nucleus | 95.6 | 93.06 |
| CDX68245 | Canola | nucleus | 84.67 | 83.78 |
| CDY61331 | Canola | nucleus | 84.98 | 83.71 |
| CDY11129 | Canola | nucleus | 84.52 | 83.26 |
| AT1G73100.1 | Thale cress | nucleus | 81.64 | 80.42 |
| CDY04931 | Canola | cytosol, extracellular, nucleus | 7.28 | 63.16 |
| CDX80930 | Canola | nucleus | 57.06 | 58.39 |
| CDY11319 | Canola | nucleus | 56.45 | 57.67 |
| CDX98805 | Canola | nucleus | 55.84 | 56.18 |
| CDX98804 | Canola | nucleus | 50.83 | 54.65 |
| CDY14135 | Canola | nucleus | 56.15 | 51.25 |
| GSMUA_Achr5P27620_001 | Banana | nucleus | 39.15 | 41.75 |
| Zm00001d010646_P001 | Maize | plastid | 40.52 | 40.95 |
| EES19725 | Sorghum | nucleus | 41.88 | 40.95 |
| Os12t0128450-00 | Rice | nucleus | 38.09 | 40.88 |
| CDY26218 | Canola | nucleus | 43.25 | 40.83 |
| TraesCS1A01G362000.1 | Wheat | nucleus | 41.73 | 40.68 |
| TraesCS1B01G378900.1 | Wheat | nucleus | 41.58 | 40.65 |
| TraesCS1D01G366800.1 | Wheat | nucleus | 41.58 | 40.53 |
| Os11t0131600-00 | Rice | nucleus | 40.67 | 40.36 |
| Os05t0490700-01 | Rice | extracellular | 40.82 | 40.03 |
| Zm00001d038541_P002 | Maize | nucleus | 42.03 | 40.03 |
| CDY66122 | Canola | nucleus | 43.1 | 39.78 |
| TraesCS1D01G307700.1 | Wheat | nucleus | 40.52 | 39.61 |
| TraesCS1A01G308300.1 | Wheat | nucleus | 40.52 | 39.61 |
| TraesCS1B01G319000.1 | Wheat | nucleus | 40.52 | 39.61 |
| TraesCS4B01G280000.1 | Wheat | nucleus | 43.55 | 39.59 |
| TraesCS5D01G152000.1 | Wheat | nucleus | 40.36 | 38.66 |
| TraesCS5A01G140500.1 | Wheat | nucleus | 39.91 | 38.56 |
| TraesCS5B01G138800.1 | Wheat | nucleus | 40.52 | 37.61 |
| CDY56214 | Canola | nucleus | 45.22 | 37.58 |
| CDX70182 | Canola | nucleus | 57.51 | 37.45 |
| TraesCS3B01G366900.1 | Wheat | nucleus | 41.88 | 37.15 |
| TraesCS3B01G367200.1 | Wheat | nucleus | 41.88 | 37.15 |
| Os01t0811300-01 | Rice | nucleus, plasma membrane | 41.27 | 36.96 |
| EES01635 | Sorghum | nucleus | 41.58 | 36.93 |
| TraesCS3A01G336100.1 | Wheat | nucleus | 41.73 | 36.91 |
| TraesCS3D01G329100.1 | Wheat | nucleus | 41.43 | 36.74 |
| TraesCS4D01G278500.1 | Wheat | nucleus | 45.52 | 36.63 |
| TraesCS3A01G385200.1 | Wheat | plastid | 40.21 | 36.5 |
| Os11t0602200-01 | Rice | nucleus | 44.61 | 36.16 |
| TraesCS4A01G023500.1 | Wheat | nucleus | 45.52 | 35.97 |
| EER96081 | Sorghum | nucleus | 44.92 | 35.66 |
| Zm00001d041005_P001 | Maize | nucleus | 37.78 | 35.62 |
| OQU78645 | Sorghum | nucleus | 40.21 | 35.52 |
| EES10399 | Sorghum | nucleus | 43.7 | 35.16 |
| Zm00001d019195_P001 | Maize | nucleus | 44.76 | 34.46 |
| TraesCS3B01G417400.1 | Wheat | nucleus | 43.55 | 34.45 |
| Zm00001d043135_P003 | Maize | nucleus | 40.67 | 34.4 |
| CDY28970 | Canola | cytosol | 12.9 | 34.0 |
| TraesCS3D01G378200.1 | Wheat | plastid | 34.6 | 33.28 |
| CDY19475 | Canola | nucleus | 27.62 | 32.97 |
| CDY17156 | Canola | nucleus | 27.47 | 31.98 |
| CDY40566 | Canola | cytosol, plastid | 13.66 | 31.8 |
| CDY26221 | Canola | nucleus | 43.1 | 31.73 |
| CDX78210 | Canola | nucleus | 28.98 | 30.27 |
| CDX73506 | Canola | nucleus | 28.83 | 30.02 |
| CDY23755 | Canola | nucleus | 28.83 | 29.83 |
| CDY37735 | Canola | nucleus, plastid | 28.38 | 29.36 |
| CDX78549 | Canola | nucleus | 26.71 | 29.14 |
| CDX70530 | Canola | nucleus | 26.4 | 28.86 |
| CDY31670 | Canola | nucleus | 31.26 | 28.73 |
| CDX84255 | Canola | nucleus | 31.41 | 28.71 |
| CDY40567 | Canola | mitochondrion | 13.05 | 26.79 |
| CDX89510 | Canola | nucleus | 30.8 | 26.78 |
| CDY25627 | Canola | nucleus | 30.2 | 26.68 |
| CDY50660 | Canola | nucleus | 13.51 | 26.49 |
| CDX77744 | Canola | cytosol | 13.2 | 26.2 |
| CDY33517 | Canola | cytosol, mitochondrion, nucleus | 13.2 | 26.2 |
| CDY51752 | Canola | nucleus | 13.05 | 25.6 |
| CDY28971 | Canola | mitochondrion | 12.9 | 24.85 |
| CDY33518 | Canola | nucleus | 13.66 | 24.73 |
| CDX77745 | Canola | nucleus | 13.51 | 23.12 |
| CDX74192 | Canola | nucleus | 14.42 | 20.34 |
| CDX92067 | Canola | nucleus | 14.26 | 19.92 |
| CDY49341 | Canola | nucleus | 14.42 | 17.06 |
| CDY01852 | Canola | plasma membrane | 45.68 | 16.22 |
| CDY14903 | Canola | nucleus | 14.72 | 15.16 |
| CDX94744 | Canola | nucleus | 14.72 | 14.16 |
| CDY22319 | Canola | nucleus | 15.02 | 14.04 |
| CDX96935 | Canola | nucleus | 15.33 | 12.88 |
| CDY42922 | Canola | plasma membrane, vacuole | 16.09 | 12.8 |
| CDY46064 | Canola | nucleus | 9.26 | 12.4 |
| CDY39668 | Canola | nucleus | 18.51 | 8.93 |
| CDY62521 | Canola | nucleus | 18.51 | 8.93 |
| CDX89821 | Canola | cytosol | 0.15 | 1.23 |
| CDX86631 | Canola | cytosol | 0.15 | 1.23 |
| CDY21127 | Canola | cytosol | 0.15 | 1.23 |
| CDY49340 | Canola | cytosol | 0.15 | 1.23 |
| HORVU6Hr1G090170.1 | Barley | cytosol | 0.15 | 0.8 |
| CDX92068 | Canola | mitochondrion | 0.15 | 0.71 |
| CDY15508 | Canola | mitochondrion | 0.15 | 0.71 |
| CDY18235 | Canola | mitochondrion | 0.15 | 0.71 |
| CDY53193 | Canola | mitochondrion | 0.15 | 0.71 |
| CDX74191 | Canola | mitochondrion | 0.15 | 0.71 |
| CDY42923 | Canola | mitochondrion | 0.15 | 0.71 |
Protein Annotations
| KEGG:00310+2.1.1.43 | MapMan:12.3.3.7 | MapMan:12.5.1.16.1 | Gene3D:2.170.270.10 | Gene3D:2.30.280.10 | GO:A0A078J655 |
| UniProt:A0A078J655 | EnsemblPlants:CDY59935 | ProteinID:CDY59935 | ProteinID:CDY59935.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005694 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0008270 |
| GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016571 | GO:GO:0016740 | GO:GO:0018024 | GO:GO:0019538 |
| GO:GO:0032259 | GO:GO:0034968 | EnsemblPlantsGene:GSBRNA2T00027907001 | InterPro:Hist-Lys_N-MeTrfase_plant | InterPro:IPR001214 | InterPro:IPR003105 |
| InterPro:IPR003616 | InterPro:IPR007728 | InterPro:IPR025794 | InterPro:IPR036987 | PFAM:PF00856 | PFAM:PF02182 |
| PFAM:PF05033 | PFscan:PS50280 | PFscan:PS50867 | PFscan:PS50868 | PFscan:PS51015 | PFscan:PS51575 |
| PANTHER:PTHR22884 | PANTHER:PTHR22884:SF415 | InterPro:PUA-like_sf | InterPro:Post-SET_dom | InterPro:Pre-SET_dom | InterPro:SET_dom |
| SMART:SM00317 | SMART:SM00466 | SMART:SM00468 | InterPro:SRA-YDG_sf | InterPro:SRA_YDG | SUPFAM:SSF82199 |
| SUPFAM:SSF88697 | UniParc:UPI0004EDCB5E | SEG:seg | : | : | : |
Description
BnaC06g43880DBnaC06g43880D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J655]
Coordinates
chrLK033822:+:34706..37508
Molecular Weight (calculated)
71679.1 Da
IEP (calculated)
8.371
GRAVY (calculated)
-0.421
Length
659 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGVPGMNTV PNPNYYDKSI VLDVKPLRSL KPVFPNGNQG PPFVGCPPFG PPSSSTGHSP FSPFGAQPPP DLNQTQDTPP PTFVTPIQSY RPPTVVSNGP
101: STSSGTRKGV GRPKRNAVSI GTSNGKKKEK TSLDVQVVKR DFDSGISAPE REDGNGDLVS SVLTRFDAVR RRLAQVEHGK AGTSKAAGVL MSNGVRTNMK
201: KRVGTVPGIE VGDIFFSRIE MCLVGLHMQT MAGIDYITSK VGADEEPLAT SIVSSGRYDG EAQDPESLIY SGQGGNADKN GQASDQKLER GNLALEKSLR
301: KGNGVRVIRG EEDPASKTGK IYVYDGVYTI SESWVEKGKS GCNTFKYRLV RVPNQPPAFG IWKAVLKWKE GLTARANLIL PDITSGVESK PVSLVNDVDD
401: EKGPSYFTYI STLKSSKQTQ PPTIGCSCHG SCAAGNLDCS CVRKNGGDLP YLNGVMLVSR RPMVYECGTT CPCHASCKNK VIQTGLKFRM EVFKTDHRGW
501: GLRSWDPIRA GSFICEYAGE VNLRMEQEDD EFVFDTSRVY NSFKWNYEPV LVDENPSDEV PEEFNLPSPV LISAKSFGNV ARFMNHSCSP NVMWQPVFVE
601: GSGESVVRIA FFAIRHIPPM AELTYDYGVS LTSEARDGSL LHGKRKCLCG SVKCRGSFG
101: STSSGTRKGV GRPKRNAVSI GTSNGKKKEK TSLDVQVVKR DFDSGISAPE REDGNGDLVS SVLTRFDAVR RRLAQVEHGK AGTSKAAGVL MSNGVRTNMK
201: KRVGTVPGIE VGDIFFSRIE MCLVGLHMQT MAGIDYITSK VGADEEPLAT SIVSSGRYDG EAQDPESLIY SGQGGNADKN GQASDQKLER GNLALEKSLR
301: KGNGVRVIRG EEDPASKTGK IYVYDGVYTI SESWVEKGKS GCNTFKYRLV RVPNQPPAFG IWKAVLKWKE GLTARANLIL PDITSGVESK PVSLVNDVDD
401: EKGPSYFTYI STLKSSKQTQ PPTIGCSCHG SCAAGNLDCS CVRKNGGDLP YLNGVMLVSR RPMVYECGTT CPCHASCKNK VIQTGLKFRM EVFKTDHRGW
501: GLRSWDPIRA GSFICEYAGE VNLRMEQEDD EFVFDTSRVY NSFKWNYEPV LVDENPSDEV PEEFNLPSPV LISAKSFGNV ARFMNHSCSP NVMWQPVFVE
601: GSGESVVRIA FFAIRHIPPM AELTYDYGVS LTSEARDGSL LHGKRKCLCG SVKCRGSFG
001: MQGVPGFNTV PNPNHYDKSI VLDIKPLRSL KPVFPNGNQG PPFVGCPPFG PSSSEYSSFF PFGAQQPTHD TPDLNQTQNT PIPSFVPPLR SYRTPTKTNG
101: PSSSSGTKRG VGRPKGTTSV KKKEKKTVAN EPNLDVQVVK KFSSDFDSGI SAAEREDGNA YLVSSVLMRF DAVRRRLSQV EFTKSATSKA AGTLMSNGVR
201: TNMKKRVGTV PGIEVGDIFF SRIEMCLVGL HMQTMAGIDY IISKAGSDEE SLATSIVSSG RYEGEAQDPE SLIYSGQGGN ADKNRQASDQ KLERGNLALE
301: NSLRKGNGVR VVRGEEDAAS KTGKIYIYDG LYSISESWVE KGKSGCNTFK YKLVRQPGQP PAFGFWKSVQ KWKEGLTTRP GLILPDLTSG AESKPVSLVN
401: DVDEDKGPAY FTYTSSLKYS ETFKLTQPVI GCSCSGSCSP GNHNCSCIRK NDGDLPYLNG VILVSRRPVI YECGPTCPCH ASCKNRVIQT GLKSRLEVFK
501: TRNRGWGLRS WDSLRAGSFI CEYAGEVKDN GNLRGNQEED AYVFDTSRVF NSFKWNYEPE LVDEDPSTEV PEEFNLPSPL LISAKKFGNV ARFMNHSCSP
601: NVFWQPVIRE GNGESVIHIA FFAMRHIPPM AELTYDYGIS PTSEARDESL LHGQRTCLCG SEQCRGSFG
101: PSSSSGTKRG VGRPKGTTSV KKKEKKTVAN EPNLDVQVVK KFSSDFDSGI SAAEREDGNA YLVSSVLMRF DAVRRRLSQV EFTKSATSKA AGTLMSNGVR
201: TNMKKRVGTV PGIEVGDIFF SRIEMCLVGL HMQTMAGIDY IISKAGSDEE SLATSIVSSG RYEGEAQDPE SLIYSGQGGN ADKNRQASDQ KLERGNLALE
301: NSLRKGNGVR VVRGEEDAAS KTGKIYIYDG LYSISESWVE KGKSGCNTFK YKLVRQPGQP PAFGFWKSVQ KWKEGLTTRP GLILPDLTSG AESKPVSLVN
401: DVDEDKGPAY FTYTSSLKYS ETFKLTQPVI GCSCSGSCSP GNHNCSCIRK NDGDLPYLNG VILVSRRPVI YECGPTCPCH ASCKNRVIQT GLKSRLEVFK
501: TRNRGWGLRS WDSLRAGSFI CEYAGEVKDN GNLRGNQEED AYVFDTSRVF NSFKWNYEPE LVDEDPSTEV PEEFNLPSPL LISAKKFGNV ARFMNHSCSP
601: NVFWQPVIRE GNGESVIHIA FFAMRHIPPM AELTYDYGIS PTSEARDESL LHGQRTCLCG SEQCRGSFG
Arabidopsis Description
SUVH3Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5P4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.