CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY39668	Canola	nucleus	97.29	97.29
Bra032148.1-P	Field mustard	nucleus	97.14	97.14
AT2G23740.2	Thale cress	nucleus	76.79	75.9
CDY46064	Canola	nucleus	26.5	73.58
KRH28566	Soybean	nucleus	52.05	49.2
KRH76897	Soybean	nucleus	52.49	48.06
VIT_04s0023g00980.t01	Wine grape	nucleus	53.37	48.06
KRH69981	Soybean	nucleus	51.24	46.85
KRH08338	Soybean	nucleus	50.73	46.32
Solyc02g089970.2.1	Tomato	nucleus	49.34	44.67
GSMUA_Achr5P08820_001	Banana	cytosol	7.47	43.04
Os02t0708600-01	Rice	nucleus	16.84	40.85
GSMUA_Achr5P08830_001	Banana	nucleus	30.45	36.62
KXG30908	Sorghum	nucleus	37.04	31.78
CDY04931	Canola	cytosol, extracellular, nucleus	1.76	31.58
HORVU6Hr1G069350.6	Barley	nucleus	36.82	31.03
TraesCS6B01G302100.2	Wheat	nucleus	36.6	30.83
TraesCS6D01G254900.2	Wheat	nucleus	36.38	30.77
TraesCS6A01G274600.1	Wheat	nucleus	36.68	30.7
Zm00001d044165_P001	Maize	nucleus	6.81	30.59
Zm00001d017798_P002	Maize	nucleus	33.38	30.54
Zm00001d051590_P001	Maize	nucleus	32.87	29.81
CDX92067	Canola	nucleus	7.76	22.46
CDX74192	Canola	nucleus	7.61	22.27
Os02t0708500-01	Rice	cytosol	6.95	21.79
CDY50660	Canola	nucleus	5.34	21.73
CDY51752	Canola	nucleus	5.34	21.73
CDY14903	Canola	nucleus	9.22	19.69
CDY22319	Canola	nucleus	9.96	19.29
CDX94744	Canola	nucleus	9.59	19.12
CDY49341	Canola	nucleus	7.69	18.85
CDY59935	Canola	nucleus	8.93	18.51
CDX96449	Canola	nucleus	8.78	18.26
CDY11129	Canola	nucleus	8.78	17.94
CDX78549	Canola	nucleus	7.91	17.88
CDX68245	Canola	nucleus	8.71	17.87
CDY61331	Canola	nucleus	8.71	17.79
CDX70530	Canola	nucleus	7.83	17.74
CDX96935	Canola	nucleus	10.03	17.47
CDX98805	Canola	nucleus	8.35	17.4
CDX84255	Canola	nucleus	9.15	17.34
CDY31670	Canola	nucleus	9.08	17.29
CDX98804	Canola	nucleus	7.69	17.13
CDY11319	Canola	nucleus	8.05	17.05
CDX80930	Canola	nucleus	7.91	16.77
CDY14135	Canola	nucleus	8.35	15.79
CDY26218	Canola	nucleus	7.91	15.47
CDX73506	Canola	nucleus	7.1	15.32
CDX78210	Canola	nucleus	6.95	15.06
CDY37735	Canola	nucleus, plastid	6.88	14.76
CDY23755	Canola	nucleus	6.88	14.76
CDY25627	Canola	nucleus	8.05	14.75
CDY66122	Canola	nucleus	7.69	14.71
CDY17156	Canola	nucleus	6.08	14.66
CDX89510	Canola	nucleus	8.13	14.64
CDY42922	Canola	plasma membrane, vacuole	8.71	14.37
CDY19475	Canola	nucleus	5.78	14.31
CDY56214	Canola	nucleus	7.76	13.37
CDY26221	Canola	nucleus	7.39	11.28
CDX70182	Canola	nucleus	8.05	10.87
CDY28970	Canola	cytosol	1.9	10.4
CDY40566	Canola	cytosol, plastid	1.98	9.54
CDY33517	Canola	cytosol, mitochondrion, nucleus	1.98	8.13
CDY40567	Canola	mitochondrion	1.9	8.1
CDX77744	Canola	cytosol	1.9	7.83
CDY28971	Canola	mitochondrion	1.83	7.31
CDY33518	Canola	nucleus	1.76	6.59
CDX77745	Canola	nucleus	1.68	5.97
CDY01852	Canola	plasma membrane	7.98	5.87
CDX86631	Canola	cytosol	0.0	0.0
CDX89821	Canola	cytosol	0.0	0.0
CDY15508	Canola	mitochondrion	0.0	0.0
CDX92068	Canola	mitochondrion	0.0	0.0
CDY18235	Canola	mitochondrion	0.0	0.0
CDY53193	Canola	mitochondrion	0.0	0.0
CDY21127	Canola	cytosol	0.0	0.0
CDX74191	Canola	mitochondrion	0.0	0.0
CDY49340	Canola	cytosol	0.0	0.0
CDY42923	Canola	mitochondrion	0.0	0.0

Protein Annotations

KEGG:00310+2.1.1.43	KEGG:00340+2.1.1.22	MapMan:12.3.3.7	Gene3D:2.170.270.10	Gene3D:3.30.160.60	GO:A0A078JA11
UniProt:A0A078JA11	EnsemblPlants:CDY62521	ProteinID:CDY62521	ProteinID:CDY62521.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005694	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168
GO:GO:0008270	GO:GO:0009987	GO:GO:0016043	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538
GO:GO:0034968	EnsemblPlantsGene:GSBRNA2T00036357001	InterPro:IPR001214	InterPro:IPR007728	InterPro:IPR013087	PFAM:PF00856
PFAM:PF05033	PFAM:PF11722	ScanProsite:PS00028	PFscan:PS50157	PFscan:PS50280	PFscan:PS50867
PANTHER:PTHR22884	PANTHER:PTHR22884:SF296	MetaCyc:PWY-6829	InterPro:Pre-SET_dom	InterPro:SET_dom	SMART:SM00317
SMART:SM00355	SMART:SM00468	SUPFAM:SSF82199	UniParc:UPI0004EAFAE7	InterPro:Znf_C2H2_type	InterPro:Znf_CCCH-type_TRM13
SEG:seg	:	:	:	:	:

Description

BnaC04g56280DBnaC04g56280D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JA11]

Coordinates

chrLK034156:+:2439..8710

Molecular Weight (calculated)

153600.0 Da

IEP (calculated)

6.667

GRAVY (calculated)

-0.486

Length

1366 amino acids

Sequence
(BLAST)

0001: MEVMSCSSSQ GAEQVETHGG LTMDEMLLDV DVEDSTVNDS ALKPELDGLN AEKHSTTDVV NEETENLGGD NVEGESSSPS EPKWLQQDEP VALWVKWRGK
0101: WQAGIRCARA DWPLTTLRGK PTHDRKKYYV IFFPHTKNYS WADMQLVRSI YEFPDPIAYK SHKVGVKMVK DLTVARRNIM RKLTIGMLNI VDQFHSEVVV
0201: ESGNDIIFWK EFAMEASRST SYQDLGRMLV KLHSMILQRY MDPNWLENSF PSWVQRCNDA MNAESVELLK EEFDNCIQWN QVKSISDLQM QLMVLSEWKT
0301: WKHDVTKWFS ISRRSVAETA QEDSSKSIFN SDVQASHKRP KLEIRRAETT NTSSQMEPDT SPQDNTNAPV AVMKDEDVIM NTPVNGTDLW DGIVVEASGS
0401: QLVKTRETND LSLTVVKKPF GSGNKSQQCT AFIEAKGRQC VRWANEGDIY CCVHLASRFA TKAIKNEASP AAAEAPMCGG VTVLGTKCKH RSLPGMLYCK
0501: KHRPHTEMVV MTPDNNSSSH LLVKRKAAEM IEATQYQDVV VVPPPFVPNG TTTSFTEMLE HCNKEDNLCV GSCSENSYVP CNEFATKHTL YCEQHLPNWL
0601: KRARNGKSRI ISKEVFVDLL RSCSSREEKL PLHQACDVFY KLFKSLLSLR NSVPVDQQLE WAISEASRDA DAGVGRFLMK LVSHEKERLA RIWGFNAYGE
0701: EDASESPLAI TNGKGEETRD EEKWSFVGFA CAICLDSFVK PKLLEAHVEE RHHVQFAEKC MLLQCIPCGS NFGDKEQLLV HVQAVHPSEC KTLTVASESQ
0801: NPEASNSQIV ASQNIESTSG GVHRYVCKFC GLKFNLLPDL GRHHQAEHMG GLVTSRGPKK GLRFNSTYRM KSGRLSRPNK FKKSLGAVSY SRIRNRAGVN
0901: MKRRIMQDST KSKTESSPPP SDSTNFDRSA DDDAHCSLVS NILFSKIKKA KLRPNNQDIL SAARSACCKV SLENSMEAKF GVLPERVYLK AAKLCGEHGV
1001: QLIWHLEGYI CSNGCKPSKE PNLLSPLIPR QENDRSMIAE DGGEASDNGL EVDECHCIME AHHFTKRPLG KTNVLCSDIS FGKEPVPVSC VVDEDLLKQC
1101: EKKPWECFTY ITKPMLNPSV DLAKEKLQLR CGCPGSVCSP VTCDHVYLFG NDFEESRDIY GKSMRCRFPY DDKERIILEE GYPVYECNEL CGCSRTCHNR
1201: VLQNGIRTKL EVFRTESKGW GVRACEHILR GTFVCEYIGE VLDQQEANKR RTQYGEDGCS YIHDVDANIN DIGRLIEGET DFVIDATTHG NVSRFINHSC
1301: SPNLVTYQVV VESMESSLAH IGLYASTDIA AGDEITRDYG RRPLTSGQEN GHPCHCRATY CRGCFF

Best Arabidopsis Sequence Match ( AT2G23740.3 )
(BLAST)

0001: MEVKMDELVL DVDVEEATGS ELLVKSEPEA DLNAVKSSTD LVTVTGPIGK NGEGESSPSE PKWLQQDEPI ALWVKWRGKW QAGIRCAKAD WPLTTLRGKP
0101: THDRKKYCVI FFPHTKNYSW ADMQLVRSIN EFPDPIAYKS HKIGLKLVKD LTAARRYIMR KLTVGMFNIV DQFPSEVVSE AARDIIIWKE FAMEATRSTS
0201: YHDLGIMLVK LHSMILQRYM DPIWLENSFP LWVQKCNNAV NAESIELLNE EFDNCIKWNE VKSLSESPMQ PMLLSEWKTW KHDIAKWFSI SRRGVGEIAQ
0301: PDSKSVFNSD VQASRKRPKL EIRRAETTNA THMESDTSPQ GLSAIDSEFF SSRGNTNSPE TMKEENPVMN TPENGLDLWD GIVVEAGGSQ FMKTKETNGL
0401: SHPQDQHINE SVLKKPFGSG NKSQQCIAFI ESKGRQCVRW ANEGDVYCCV HLASRFTTKS MKNEGSPAVE APMCGGVTVL GTKCKHRSLP GFLYCKKHRP
0501: HTGMVKPDDS SSFLVKRKVS EIMSTLETNQ CQDLVPFGEP EGPSFEKQEP HGATSFTEMF EHCSQEDNLC IGSCSENSYI SCSEFSTKHS LYCEQHLPNW
0601: LKRARNGKSR IISKEVFVDL LRGCLSREEK LALHQACDIF YKLFKSVLSL RNSVPMEVQI DWAKTEASRN ADAGVGEFLM KLVSNERERL TRIWGFATGA
0701: DEEDVSLSEY PNRLLAITNT CDDDDDKEKW SFSGFACAIC LDSFVRRKLL EIHVEERHHV QFAEKCMLLQ CIPCGSHFGD KEQLLVHVQA VHPSECKSLT
0801: VASECNLTNG EFSQKPEAGS SQIVVSQNNE NTSGVHKFVC KFCGLKFNLL PDLGRHHQAE HMGPSLVGSR GPKKGIRFNT YRMKSGRLSR PNKFKKSLGA
0901: VSYRIRNRAG VNMKRRMQGS KSLGTEGNTE AGVSPPLDDS RNFDGVTDAH CSVVSDILLS KVQKAKHRPN NLDILSAARS ACCRVSVETS LEAKFGDLPD
1001: RIYLKAAKLC GEQGVQVQWH QEGYICSNGC KPVKDPNLLH PLIPRQENDR FGIAVDAGQH SNIELEVDEC HCIMEAHHFS KRPFGNTAVL CKDISFGKES
1101: VPICVVDDDL WNSEKPYEMP WECFTYVTNS ILHPSMDLVK ENLQLRCSCR SSVCSPVTCD HVYLFGNDFE DARDIYGKSM RCRFPYDGKQ RIILEEGYPV
1201: YECNKFCGCS RTCQNRVLQN GIRAKLEVFR TESKGWGLRA CEHILRGTFV CEYIGEVLDQ QEANKRRNQY GNGDCSYILD IDANINDIGR LMEEELDYAI
1301: DATTHGNISR FINHSCSPNL VNHQVIVESM ESPLAHIGLY ASMDIAAGEE ITRDYGRRPV PSEQENEHPC HCKATNCRGL LS

Arabidopsis Description

SUVR5Histone-lysine N-methyltransferase SUVR5 [Source:UniProtKB/Swiss-Prot;Acc:O64827]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.