Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY09423 | Canola | cytosol | 90.2 | 88.18 |
| AT2G01710.2 | Thale cress | mitochondrion | 74.51 | 64.23 |
| KRH62217 | Soybean | cytosol, nucleus | 44.77 | 55.69 |
| VIT_18s0001g07450.t01 | Wine grape | cytosol | 51.31 | 49.37 |
| KRH72458 | Soybean | nucleus | 50.0 | 43.97 |
| KRH16845 | Soybean | nucleus | 49.02 | 41.21 |
| PGSC0003DMT400024179 | Potato | cytosol | 47.71 | 39.14 |
| Solyc04g076270.1.1 | Tomato | nucleus | 47.06 | 38.71 |
| CDY21586 | Canola | cytosol | 31.7 | 33.56 |
| CDY69792 | Canola | cytosol | 32.03 | 33.45 |
| CDY31322 | Canola | cytosol | 35.95 | 29.49 |
| CDX84519 | Canola | nucleus | 36.6 | 23.58 |
| CDY58269 | Canola | nucleus | 36.6 | 22.31 |
| CDY46799 | Canola | nucleus | 20.26 | 15.82 |
| CDY45966 | Canola | nucleus | 34.64 | 14.25 |
| CDY45473 | Canola | nucleus | 34.31 | 14.04 |
Protein Annotations
| Gene3D:1.10.287.110 | MapMan:12.5.1.16.2 | UniProt:A0A078JJL2 | EnsemblPlants:CDY66640 | ProteinID:CDY66640 | ProteinID:CDY66640.1 |
| InterPro:DnaJ_domain | EnsemblPlantsGene:GSBRNA2T00055482001 | InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf | PFAM:PF00226 |
| PFscan:PS50076 | PANTHER:PTHR45496 | SMART:SM00271 | SUPFAM:SSF46565 | UniParc:UPI0004EEEDC4 | SEG:seg |
Description
BnaC02g47720DBnaC02g47720D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JJL2]
Coordinates
chrLK035382:+:3961..5268
Molecular Weight (calculated)
33850.0 Da
IEP (calculated)
6.755
GRAVY (calculated)
-0.492
Length
306 amino acids
Sequence
(BLAST)
(BLAST)
001: MGENTNRSEA ERLLGISEKL LESRDLNGSK EFAILAQETE PLLEGTDQIL AVVDVLLASA AENRINNQPN WYKILQIEDP DQSSADADLI KKQYRRLALL
101: LHPDKNRLPY ADQAFRFVVD AWEVLSTASK KSQFDLVFTK VDLGGGRSKK KGTSERMSTF WTACPYCYAL HEYPRVYQEY CIRCQNCQRA FHAASVPQLP
201: PLVPGKDEYY CCWGFFPMGF VGGKGGEEAA AAAGDTTKFP NWMPPVFGQN GGVVIPTEPG VPISFDGWSS GSGKRDAEAV RSDDNGGVIS DGMPKKRGRG
301: RPKKNV
101: LHPDKNRLPY ADQAFRFVVD AWEVLSTASK KSQFDLVFTK VDLGGGRSKK KGTSERMSTF WTACPYCYAL HEYPRVYQEY CIRCQNCQRA FHAASVPQLP
201: PLVPGKDEYY CCWGFFPMGF VGGKGGEEAA AAAGDTTKFP NWMPPVFGQN GGVVIPTEPG VPISFDGWSS GSGKRDAEAV RSDDNGGVIS DGMPKKRGRG
301: RPKKNV
001: MLLFFFPRPF LHTANQSLVS SSLVEAIIFR SAHHFSAIAD GRRKMGDNNP NRSEAERLLG IAEKLLESRD LNGSKEFAIL AQETEPLLEG TDQILAVVDV
101: LLSSAPENRI KNQPNWYKIL QIEDLTESST DNDLIKKQYR RLALLLHPDK NRFPFADQAF RFVLDAWEVL STPTKKSQFD GDLNLIFTKV NLNTQKSKKK
201: TTTNEKMSTF WTACPYCYSL HEYPRVYQEY CIRCQNCQRA FHAASIPQLP PLIPGKDEYY CCWGFFPMGF VGGKGGEAAI ANGVDAAKFP NWMPPVFSSG
301: GVAAPPSGNG VSFDGWSGGA AKRDNEAVRS NNGVGVNSDG TPKKRGRGRP KKNPV
101: LLSSAPENRI KNQPNWYKIL QIEDLTESST DNDLIKKQYR RLALLLHPDK NRFPFADQAF RFVLDAWEVL STPTKKSQFD GDLNLIFTKV NLNTQKSKKK
201: TTTNEKMSTF WTACPYCYSL HEYPRVYQEY CIRCQNCQRA FHAASIPQLP PLIPGKDEYY CCWGFFPMGF VGGKGGEAAI ANGVDAAKFP NWMPPVFSSG
301: GVAAPPSGNG VSFDGWSGGA AKRDNEAVRS NNGVGVNSDG TPKKRGRGRP KKNPV
Arabidopsis Description
Chaperone DnaJ-domain superfamily protein [Source:TAIR;Acc:AT2G01710]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.