Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- golgi 5
- plasma membrane 5
- endoplasmic reticulum 5
- vacuole 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY65601 | Canola | extracellular | 97.3 | 97.3 |
| CDY25484 | Canola | cytosol | 45.95 | 82.26 |
| CDY32259 | Canola | cytosol | 41.44 | 74.19 |
| AT4G16500.1 | Thale cress | extracellular | 72.07 | 68.38 |
| CDY32255 | Canola | cytosol | 63.96 | 68.27 |
| CDY25483 | Canola | extracellular | 66.67 | 67.27 |
| CDY32256 | Canola | extracellular | 63.06 | 63.64 |
| CDY32254 | Canola | extracellular | 55.86 | 55.36 |
| CDY68173 | Canola | extracellular | 54.95 | 54.46 |
| CDY32258 | Canola | cytosol | 51.35 | 50.0 |
| CDX90517 | Canola | extracellular | 50.45 | 49.56 |
| CDY09687 | Canola | extracellular | 50.45 | 49.12 |
| CDX92952 | Canola | extracellular | 52.25 | 47.93 |
| CDX92950 | Canola | extracellular | 46.85 | 40.0 |
Protein Annotations
| Gene3D:3.10.450.10 | MapMan:35.1 | GO:A0A078JU67 | UniProt:A0A078JU67 | EnsemblPlants:CDY69151 | ProteinID:CDY69151 |
| ProteinID:CDY69151.1 | InterPro:Cystatin | InterPro:Cystatin_dom | GO:GO:0003674 | GO:GO:0004869 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0010466 | GO:GO:0010951 | GO:GO:0019538 | GO:GO:0030234 |
| GO:GO:0030414 | EnsemblPlantsGene:GSBRNA2T00083500001 | PFAM:PD001231 | PFAM:PF16845 | PANTHER:PTHR11413 | PANTHER:PTHR11413:SF65 |
| SMART:SM00043 | SUPFAM:SSF54403 | SignalP:SignalP-noTM | UniParc:UPI0004EBE4AA | SEG:seg | : |
Description
BnaCnng62150DCysteine proteinase inhibitor [Source:UniProtKB/TrEMBL;Acc:A0A078JU67]
Coordinates
chrLK038747:+:1392..1834
Molecular Weight (calculated)
12216.0 Da
IEP (calculated)
9.691
GRAVY (calculated)
0.067
Length
111 amino acids
Sequence
(BLAST)
(BLAST)
001: MMKSLVCLSL ILLPLIAVVE GNLGGWKKID NLSDPNVVSL AKYAVDEHNK QSKANLVFVK IVEGKEQVIS GKKYDLKIAA KDGGGVTKNY EAVVVERVWA
101: HYRSLESFKA V
101: HYRSLESFKA V
001: MMMKSLICLS LILLPLVSVV EGLGGGGGLG SRKPIKNVSD PDVVAVAKYA IEEHNKESKE KLVFVKVVEG TTQVVSGTKY DLKIAAKDGG GKIKNYEAVV
101: VEKLWLHSKS LESFKAL
101: VEKLWLHSKS LESFKAL
Arabidopsis Description
CYS4Cysteine proteinase inhibitor 4 [Source:UniProtKB/Swiss-Prot;Acc:Q84WT8]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.