Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009389.1-P | Field mustard | cytosol | 98.98 | 98.98 |
| CDY21586 | Canola | cytosol | 83.96 | 85.12 |
| AT5G09540.1 | Thale cress | nucleus | 59.73 | 62.5 |
| CDY31322 | Canola | cytosol | 51.54 | 40.48 |
| CDY66640 | Canola | cytosol | 33.45 | 32.03 |
| CDY09423 | Canola | cytosol | 33.79 | 31.63 |
| CDX84519 | Canola | nucleus | 50.51 | 31.16 |
| CDY58269 | Canola | nucleus | 50.85 | 29.68 |
| GSMUA_Achr3P06790_001 | Banana | cytosol | 31.4 | 28.31 |
| Solyc07g007230.2.1 | Tomato | nucleus | 40.61 | 27.93 |
| VIT_03s0017g00300.t01 | Wine grape | nucleus | 43.34 | 26.13 |
| KRH42098 | Soybean | nucleus | 38.91 | 25.05 |
| KRH49811 | Soybean | nucleus | 39.59 | 24.63 |
| GSMUA_Achr10P... | Banana | cytosol | 34.47 | 23.99 |
| Zm00001d047214_P001 | Maize | extracellular | 32.08 | 23.68 |
| Zm00001d029409_P001 | Maize | nucleus, peroxisome, plastid | 31.74 | 23.48 |
| PGSC0003DMT400079004 | Potato | cytosol | 40.96 | 23.48 |
| EER92178 | Sorghum | nucleus | 32.08 | 23.33 |
| TraesCS4A01G160900.1 | Wheat | cytosol | 31.06 | 22.75 |
| HORVU4Hr1G039650.1 | Barley | nucleus | 30.72 | 22.61 |
| KRH10601 | Soybean | nucleus | 38.23 | 22.54 |
| TraesCS4D01G156000.1 | Wheat | nucleus | 30.72 | 22.44 |
| TraesCS4B01G160100.1 | Wheat | cytosol | 30.38 | 22.19 |
| KRH21766 | Soybean | nucleus | 36.86 | 21.64 |
| GSMUA_Achr1P21390_001 | Banana | cytosol | 29.69 | 21.59 |
| Os07t0620200-01 | Rice | cytosol, mitochondrion, nucleus | 28.67 | 21.21 |
| KXG35797 | Sorghum | nucleus | 27.65 | 21.09 |
| Os03t0392400-01 | Rice | nucleus | 29.01 | 20.99 |
| Zm00001d047043_P001 | Maize | nucleus | 29.69 | 20.09 |
| Os09t0463700-01 | Rice | nucleus | 25.26 | 19.89 |
| HORVU2Hr1G030250.2 | Barley | cytosol | 25.94 | 19.54 |
| EES14021 | Sorghum | nucleus | 29.01 | 19.23 |
| CDY46799 | Canola | nucleus | 25.6 | 19.13 |
| TraesCS2B01G191300.1 | Wheat | cytosol | 25.6 | 19.13 |
| Zm00001d022168_P001 | Maize | cytosol, mitochondrion, peroxisome | 28.67 | 19.0 |
| TraesCS2A01G165100.1 | Wheat | cytosol | 25.26 | 18.93 |
| TraesCS2D01G172200.1 | Wheat | cytosol | 25.26 | 18.93 |
| HORVU5Hr1G055620.1 | Barley | cytosol, nucleus, plastid | 19.11 | 18.92 |
| KXG36712 | Sorghum | cytosol | 27.99 | 18.85 |
| Zm00001d020762_P001 | Maize | nucleus | 26.62 | 17.73 |
| Solyc11g006140.1.1 | Tomato | nucleus | 34.81 | 17.14 |
| CDY45966 | Canola | nucleus | 42.32 | 16.67 |
| Solyc11g006170.1.1 | Tomato | nucleus | 36.52 | 16.49 |
| PGSC0003DMT400073845 | Potato | cytosol | 36.52 | 16.41 |
| CDY45473 | Canola | nucleus | 41.64 | 16.31 |
| Solyc01g105780.2.1 | Tomato | nucleus | 37.88 | 15.48 |
| TraesCS5D01G252200.1 | Wheat | cytosol, nucleus, plastid | 27.3 | 15.18 |
| PGSC0003DMT400083794 | Potato | nucleus | 38.23 | 15.07 |
| TraesCS5A01G245400.1 | Wheat | cytosol, nucleus, plastid | 26.96 | 14.96 |
| TraesCS5B01G242900.1 | Wheat | cytosol | 26.62 | 14.8 |
| HORVU5Hr1G069570.1 | Barley | nucleus | 26.28 | 14.1 |
Protein Annotations
| EnsemblPlants:CDY69792 | EnsemblPlantsGene:GSBRNA2T00092485001 | Gene3D:1.10.287.110 | InterPro:DnaJ_domain | InterPro:IPR001623 | InterPro:IPR036869 |
| InterPro:J_dom_sf | PANTHER:PTHR45496 | PFAM:PF00226 | PFscan:PS50076 | ProteinID:CDY69792 | ProteinID:CDY69792.1 |
| SMART:SM00271 | SUPFAM:SSF46565 | UniParc:UPI0004EE44A8 | UniProt:A0A078JW82 | MapMan:12.5.1.16.2 | : |
Description
BnaA10g30160DBnaA10g30160D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JW82]
Coordinates
chrLK040340:-:1594..2530
Molecular Weight (calculated)
32191.5 Da
IEP (calculated)
4.641
GRAVY (calculated)
-0.406
Length
293 amino acids
Sequence
(BLAST)
(BLAST)
001: MVLGGDDNGA EADRWLVTSK ELLASSDFKG AKTLAIRACE EDSSRTHAAD YIIAIADTLL AGESTVGDSK LPDWYAVLRL EKLTQSLERV AVQYRRLALL
101: LNPTVNRLPF ADQALKLVSD AWCVLSDPPR KSIYDHQLGQ PQSRQPEQLA ETSESPKAAS FWTACPYCYA LFEYPKGYEE CALRCQQCGR AFEAVKTETP
201: PVESNGQGVY FFCSWAMFPV GFSGDAKTSG SCWSPVSALF HCPVLSADHH QANIKASASG NYHDVDGDGD ELYINISDDE EERDDAKKNK KGG
101: LNPTVNRLPF ADQALKLVSD AWCVLSDPPR KSIYDHQLGQ PQSRQPEQLA ETSESPKAAS FWTACPYCYA LFEYPKGYEE CALRCQQCGR AFEAVKTETP
201: PVESNGQGVY FFCSWAMFPV GFSGDAKTSG SCWSPVSALF HCPVLSADHH QANIKASASG NYHDVDGDGD ELYINISDDE EERDDAKKNK KGG
001: MVSDGGGENN RAEADQLLAT SEKLLASSDF HGAKTFAIRA CEADPSRTDA ADYILAIADT LLAGETTIGD SKVPDWYAVL RISRLTQSPE HVATQYRRLT
101: LLLKLNINRL PFADQALKLV SDAWYVLSDP PRKSIYDREL QLSQTGQSEK FQDSPLQSQA ETLENPTATS FWTACPYCFS LFEYPKGYEE CTLRCQQCRK
201: AFEAVKTQTP PVESNGEGVY FGSWAMFPVG LTSHPNTSNW SPISHLSVCT GQSSSDQQSN LKATPRNDDV DIYIAISDDD
101: LLLKLNINRL PFADQALKLV SDAWYVLSDP PRKSIYDREL QLSQTGQSEK FQDSPLQSQA ETLENPTATS FWTACPYCFS LFEYPKGYEE CTLRCQQCRK
201: AFEAVKTQTP PVESNGEGVY FGSWAMFPVG LTSHPNTSNW SPISHLSVCT GQSSSDQQSN LKATPRNDDV DIYIAISDDD
Arabidopsis Description
At5g09540 [Source:UniProtKB/TrEMBL;Acc:Q9LXB9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.