CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plasma membrane 5
extracellular 7
endoplasmic reticulum 6
golgi 5
vacuole 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY12951	Canola	extracellular	89.16	92.39
Bra027040.1-P	Field mustard	extracellular	81.12	75.82
AT1G62500.1	Thale cress	extracellular	72.73	70.03
KRH57376	Soybean	plasma membrane	34.97	55.87
KRH04104	Soybean	extracellular, plasma membrane	34.62	55.62
GSMUA_Achr4P26830_001	Banana	plastid	25.52	55.3
PGSC0003DMT400093516	Potato	plastid	40.21	50.22
VIT_02s0154g00310.t01	Wine grape	extracellular, plasma membrane	42.66	50.21
Solyc08g078890.1.1	Tomato	extracellular, golgi, plasma membrane	47.2	46.23
CDY59805	Canola	extracellular	36.01	43.64
CDY22735	Canola	extracellular	34.97	42.37
CDX81428	Canola	endoplasmic reticulum, plasma membrane	37.76	42.19
GSMUA_Achr4P29020_001	Banana	plastid	29.37	40.19
CDY09061	Canola	extracellular	35.66	39.84
CDY06505	Canola	extracellular	28.67	39.42
CDY18576	Canola	endoplasmic reticulum, plasma membrane	37.76	38.57
CDY22936	Canola	plasma membrane	38.46	37.8
CDY47794	Canola	extracellular	27.62	35.59
CDY19310	Canola	extracellular	30.42	32.22
CDY39502	Canola	extracellular	29.37	31.11

Protein Annotations

Gene3D:1.10.110.10	MapMan:35.1	UniProt:A0A078JY36	InterPro:Bifun_inhib/LTP/seed_sf	EnsemblPlants:CDY70376	ProteinID:CDY70376
ProteinID:CDY70376.1	EnsemblPlantsGene:GSBRNA2T00098443001	InterPro:Hydrophob_seed	PFAM:PF14547	PRINTS:PR01217	PFscan:PS51257
PANTHER:PTHR31731	PANTHER:PTHR31731:SF25	SUPFAM:SSF47699	SignalP:SignalP-noTM	UniParc:UPI0004EDE303	SEG:seg

Description

BnaCnng68070DBnaCnng68070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JY36]

Coordinates

chrLK041923:+:1063..1995

Molecular Weight (calculated)

28317.1 Da

IEP (calculated)

8.721

GRAVY (calculated)

0.124

Length

286 amino acids

Sequence
(BLAST)

001: MGSRVSASFF IFLIATVITL PPTIQACTPC THPHPPVPKP PHQGGGGGGG GGGGGGGGGG GGSKPPYHGG KGGGPPHHGG GGGGPPHHGG GTSPPFVRPP
101: PVVYPPPVVR PPPISRPPPV VYPPPMVRPP PVTTPPGILP PIINPPPVTT PPGILPPITT PPGLLPPIIN PPPITTPPPS SGYPPYHGGP PSGGGSAQPT
201: CPINALKLGA CVDVLGGLIH IGLGNPVENV CCPVLQGLLE LEAAVCLCTT IRLKLLNLNI FIPLALQALI TCGINPPPGF ICPPLT

Best Arabidopsis Sequence Match ( AT1G62500.1 )
(BLAST)

001: MGSRVLASFF VFLIFTVITL PPTIQACTPC TRPHPPVPKP PQHGGGGGGG SKPPPHHGGK GGGKPPPHGG KGGGPPHHGG GGGGGGKSPP VVRPPPVVVR
101: PPPIIRPPPV VYPPPIVRPP PITRPPIIIP PIQPPPVTTP PGLLPPITTP PGLLPPVTTP PGLLPPVTTP PGLLPPIINP PPVTVPPPSS GYPPYGPPSG
201: GGGGGGGKQP TCPINALKLG ACVDVLGGLI HIGLGNPVEN VCCPVLQGLL ELEAAVCLCT TIRLKLLNLN IFIPLALQAL ITCGINPPSG FVCPPLT

Arabidopsis Description

Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SXE7]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.