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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:peroxisome
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX75648 Canola extracellular 19.56 91.18
CDY23536 Canola cytosol 38.17 64.36
CDY25926 Canola cytosol 62.78 64.19
CDY38281 Canola cytosol 62.46 63.87
CDY44040 Canola endoplasmic reticulum 99.37 62.87
CDY22429 Canola endoplasmic reticulum 99.37 62.87
CDX69300 Canola endoplasmic reticulum 95.9 60.8
CDY70399 Canola endoplasmic reticulum 95.9 60.8
CDY22433 Canola cytosol 31.86 55.49
PGSC0003DMT400068626 Potato mitochondrion 29.34 50.54
AT4G37410.1 Thale cress endoplasmic reticulum, golgi 78.86 49.9
CDX75645 Canola endoplasmic reticulum, golgi 70.35 47.25
CDX69299 Canola endoplasmic reticulum 72.24 45.89
CDX75640 Canola cytosol 45.11 45.83
CDY44041 Canola endoplasmic reticulum, golgi 70.98 45.36
Zm00001d020105_P001 Maize cytosol 11.67 44.05
CDY22431 Canola endoplasmic reticulum, golgi 64.98 44.02
CDX76866 Canola cytosol 46.06 43.84
CDY46087 Canola plastid 46.69 42.65
CDY28486 Canola cytosol 23.97 42.22
CDY01419 Canola cytosol 41.96 41.96
KRH37178 Soybean cytosol 23.03 41.24
PGSC0003DMT400064225 Potato cytosol, mitochondrion 51.42 41.06
CDX75650 Canola endoplasmic reticulum 64.35 40.96
CDX69303 Canola endoplasmic reticulum 64.04 40.76
CDX75643 Canola cytosol 39.43 40.58
CDX88611 Canola endoplasmic reticulum, golgi 62.46 40.16
CDY11881 Canola endoplasmic reticulum, golgi 62.46 40.16
CDX69304 Canola endoplasmic reticulum 60.57 40.08
CDY47929 Canola extracellular, golgi 61.83 39.76
HORVU4Hr1G017200.1 Barley mitochondrion 13.25 39.62
CDY42240 Canola endoplasmic reticulum 61.51 39.55
CDX75651 Canola endoplasmic reticulum 59.94 39.5
TraesCS2A01G562200.1 Wheat cytosol 36.91 37.5
KRH12165 Soybean cytosol 25.24 34.19
CDX86416 Canola mitochondrion, plastid 48.58 34.0
CDY44042 Canola endoplasmic reticulum 50.79 33.61
CDY04029 Canola endoplasmic reticulum, golgi, plasma membrane 53.0 33.6
CDY47252 Canola endoplasmic reticulum, golgi 53.0 33.6
CDX85218 Canola mitochondrion 47.95 33.55
Solyc02g092860.2.1 Tomato endoplasmic reticulum, golgi 51.73 32.8
CDY00119 Canola endoplasmic reticulum, golgi, plastid 51.42 32.47
CDY29548 Canola endoplasmic reticulum 50.16 32.32
CDX69295 Canola endoplasmic reticulum, golgi, plastid 50.16 32.19
KRH08433 Soybean endoplasmic reticulum, golgi 49.84 31.73
CDY63574 Canola endoplasmic reticulum 49.84 31.54
CDY47253 Canola endoplasmic reticulum, golgi 49.84 31.47
CDY04030 Canola endoplasmic reticulum 49.84 31.47
CDX72626 Canola endoplasmic reticulum 48.9 31.12
CDY29549 Canola endoplasmic reticulum 48.58 30.92
KRH28416 Soybean endoplasmic reticulum, golgi 48.27 30.85
CDY38555 Canola endoplasmic reticulum 49.21 30.83
CDY29547 Canola endoplasmic reticulum, golgi 48.27 30.72
KRH42430 Soybean endoplasmic reticulum 47.95 30.4
CDX72625 Canola endoplasmic reticulum, golgi 47.63 30.32
CDY38280 Canola endoplasmic reticulum, golgi 33.75 30.14
CDY46086 Canola endoplasmic reticulum, golgi 47.0 29.98
CDY01417 Canola endoplasmic reticulum, plasma membrane, vacuole 43.22 29.72
CDY12831 Canola endoplasmic reticulum, plastid 45.11 29.48
Solyc02g064850.1.1 Tomato extracellular, plasma membrane 45.43 29.33
KRH37169 Soybean endoplasmic reticulum, golgi 45.74 29.12
KRH42431 Soybean endoplasmic reticulum 46.06 29.08
CDY01418 Canola endoplasmic reticulum, plasma membrane 43.85 28.96
KRH37167 Soybean endoplasmic reticulum 45.43 28.63
CDX75642 Canola endoplasmic reticulum 46.06 28.46
CDY12835 Canola endoplasmic reticulum, extracellular 44.8 28.29
KRH37174 Soybean endoplasmic reticulum, golgi 43.53 27.6
KRH37170 Soybean endoplasmic reticulum, golgi 43.53 27.54
KRH37173 Soybean endoplasmic reticulum, golgi 43.22 27.51
CDY12833 Canola endoplasmic reticulum, plasma membrane, vacuole 40.06 27.49
CDX83203 Canola golgi 49.84 27.38
KRH77062 Soybean endoplasmic reticulum 38.17 27.13
KRH12162 Soybean endoplasmic reticulum, golgi 42.9 27.09
KRH37172 Soybean mitochondrion 42.9 27.04
CDY21479 Canola cytosol, golgi, plastid 49.84 26.29
CDY20319 Canola endoplasmic reticulum, extracellular 27.76 26.27
CDX97037 Canola endoplasmic reticulum 37.54 23.9
CDX69819 Canola endoplasmic reticulum, golgi 36.59 23.34
CDX69817 Canola endoplasmic reticulum 36.28 23.05
CDX69294 Canola endoplasmic reticulum 45.43 23.0
CDY12832 Canola endoplasmic reticulum, extracellular 31.23 18.68
CDY23535 Canola endoplasmic reticulum 15.77 18.38
CDY22432 Canola cytosol, plastid 3.79 10.62
CDY22434 Canola mitochondrion 7.89 10.55
Os02t0504000-01 Rice endoplasmic reticulum, plasma membrane 1.26 2.16
CDY71850 Canola endoplasmic reticulum 0.0 0.0
Protein Annotations
Gene3D:1.10.630.10MapMan:50.1.13GO:A0A078K259UniProt:A0A078K259EnsemblPlants:CDY71851ProteinID:CDY71851
ProteinID:CDY71851.1InterPro:Cyt_P450InterPro:Cyt_P450_CSInterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sfGO:GO:0003674
GO:GO:0003824GO:GO:0004497GO:GO:0005488GO:GO:0005506GO:GO:0008150GO:GO:0008152
GO:GO:0016491GO:GO:0016705GO:GO:0020037GO:GO:0046872GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00020816001
InterPro:IPR036396PFAM:PF00067PRINTS:PR00385PRINTS:PR00463ScanProsite:PS00086PANTHER:PTHR24298
PANTHER:PTHR24298:SF205SUPFAM:SSF48264UniParc:UPI0004EEC44BSEG:seg::
Description
BnaCnng74800DBnaCnng74800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078K259]
Coordinates
chrLK047787:+:775..2236
Molecular Weight (calculated)
35528.3 Da
IEP (calculated)
5.313
GRAVY (calculated)
-0.211
Length
317 amino acids
Sequence
(BLAST)
001: MVTGKIYYGE DASDKAEADT FKKLIAYITS TSGARHPGEY LPFLKIFGRS FEKKVKAVGE AMDAILQRLL DECRGNKDGN TMVNHLLSLQ QQDPEYYSEV
101: IIKGLMLGIM FAASETSAVT IEWAMASLLN HPELLEKLKL EIDEKIGQDR LIEETDIPNL PYLQNVVSET LRLYPAAPLL VPRLTVEDIK IGGYDVPRET
201: MVMVNAWSIH RDPELWTEPE RFNPDRFNGG GEGEKDDVRM LITFGSGRRM CPGAGLANKI VTLALGSLIQ CFDWGRVSGK KIDMTEGPEM AMRKVVPLRA
301: MCQLRPVMNK LLTESKV
Best Arabidopsis Sequence Match ( AT1G66540.2 )
(BLAST)
001: MNSMLSNLAF NNIIRMVTGK CYYGDGAEDD PEAKRVRQLI AEAMSCFGAG HAADHLPMLR WITDFERRVK KIAARLDEFF QRLVDEKRVA KEKKENTMID
101: HLLSLQVSQP EYYTDHTIKG TMLSLILAGT DTSAVTLEWA LSSLLNNPEV LKKVRDEIDN QIGLDRLLEE SDIPNLPYLQ NIVSETLRLY PAGPLLVPHI
201: SSEDCKVGGY DMPCGTMLLV NVWAIHRDPR LWDDPASFKP ERFEKEGETH KLLTFGLGRR ACPGSGLARR LVSLSLGSLI QCFEWERIGE EEVDMTEGGG
301: LTMPRAIPLV AMCRARAFVG KIPHESG
Arabidopsis Description
At1g66540 [Source:UniProtKB/TrEMBL;Acc:A2RVN3]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.