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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • plasma membrane 5
  • extracellular 7
  • endoplasmic reticulum 5
  • golgi 5
  • vacuole 7
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
EpiLoc:vacuole
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d046596_P001 Maize extracellular 70.23 71.38
TraesCS7D01G509900.1 Wheat endoplasmic reticulum, extracellular 35.6 66.27
TraesCS7D01G509800.1 Wheat plasma membrane 54.69 61.23
TraesCS7B01G436600.1 Wheat extracellular 40.45 60.68
HORVU7Hr1G115850.2 Barley endoplasmic reticulum, plastid 34.63 60.11
Os06t0643500-01 Rice extracellular 49.19 59.61
GSMUA_Achr1P26060_001 Banana plastid 41.42 57.66
TraesCS7B01G436700.1 Wheat plasma membrane 53.72 56.46
HORVU7Hr1G115830.3 Barley extracellular 52.75 53.27
TraesCS7A01G520100.1 Wheat extracellular 50.16 50.65
GSMUA_Achr3P00830_001 Banana endoplasmic reticulum, plasma membrane 31.39 49.49
HORVU7Hr1G115810.1 Barley plastid 50.49 41.38
OQU82307 Sorghum extracellular, plasma membrane 19.42 40.54
EES12957 Sorghum endoplasmic reticulum, plasma membrane, vacuole 27.18 38.71
EER89284 Sorghum endoplasmic reticulum, vacuole 32.04 30.56
Protein Annotations
Gene3D:1.10.110.10MapMan:35.2EntrezGene:8067707InterPro:Bifun_inhib/LTP/seed_sfUniProt:C5Z6N9EnsemblPlants:EER88705
ProteinID:EER88705ProteinID:EER88705.1GO:GO:0005575GO:GO:0005576GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0009506GO:GO:0009507GO:GO:0009535GO:GO:0009536GO:GO:0009579
GO:GO:0016020GO:GO:0048046InterPro:Hydrophob_seedPFAM:PF14547PRINTS:PR01217PANTHER:PTHR31731
PANTHER:PTHR31731:SF1EnsemblPlantsGene:SORBI_3010G204700SUPFAM:SSF47699unigene:Sbi.2652SignalP:SignalP-noTMUniParc:UPI0001A8954A
RefSeq:XP_002437338.1SEG:seg::::
Description
hypothetical protein
Coordinates
chr10:+:54708780..54710522
Molecular Weight (calculated)
31576.8 Da
IEP (calculated)
9.010
GRAVY (calculated)
-0.189
Length
309 amino acids
Sequence
(BLAST)
001: MEASGKKLRP FLLTLLLVLS TAVTPILSLP EPDNEVDCDC DKPKAPKPSH SHPPKTKPSH PSPSPSPKPK NPKPPKGPAY PAPGHQQPPK SPSYPPVTRP
101: PVVGPPKGPV TRPPVTRPPV VGPPVTYPPI IGPPVTRPPV VGPPVTYPPI TGPPTTPPVV GPPVTYPPIT GPPSTTPPIT GPPSTTPPVT GPPVTYPPGG
201: GGGSSTPCPP PPPPSTPTPT PSSPTCPADS LKLGACVDLL GGLVHIGLGD PVVNKCCPVL EGLVELEAAV CLCTTIKLKL LNINLYLPLA LQLLLTCGKT
301: PPPGYTCTI
Best Arabidopsis Sequence Match ( AT3G22142.1 )
(BLAST)
0001: MGFRTRNLSF LILLLLNFFA ATYARECSPP KPSPKPHKPP KHSVVPPKPP AVKPHPHPKP PTIKPPPPKR HPHPKPPTVK PHPHPKPPTK PHPHPKPPTK
0101: PHPHPKPPTI KPPPHPKPRP HPKPPNVKPH PHPKPPTKPH PHPKPPTKHH PHPKPPTIKP PPKPPSVKPP PSTPKPPTTN PPPSTPQPPT HKPPPCTPTP
0201: PVASPPMATP PTQMPPIATP PIAKSPVATP PIATPPTATP PITIPPVATP PITTPPIANP PIIMPPIATP PVAAPPITNP PISKPPVTTP PTTTPPIAKP
0301: PIATPPISTP PAATPPAATP PITTLPPAKP PVAISPIVTP PVTPIAQPPV ATPPTATPPV ATPPIATPPT SKSPISTPPI SESPVATPPT ATSPIKTPPP
0401: AKPPVATPPI AKSPIATPPT ATPPVATPPI EKPPVATPPT TTPPTATPPV AKPPVETPPI ATPPTAKPPI STPPISKPPV ATPPAATPPI TTPTPVKPPV
0501: ATPPLAIPPV AKPPVVTPPT ATPPIATPPI AKSPVATPPT ATPPVATPPI AKPPVVTPPT TTPPTATPPV AKPPVATPPI ATPPTAKPPI STPPISKSPV
0601: ATPPAATPPI TTPPPAKPPV ATPPIATPPI AKPPVATPPT ATPPIATSPV AKPPVATPPI KTPPPAKPPV AIPPIATPPV AKPPVATPPT ATPPIATPPI
0701: ATPPVVTPPT ATPPVATPPI AKPPTTIPPT ATPPVAMPPI ATPPTAKPPI ATPPIAIPPV AKPPVVTPPT ATPPIATPPI AKSPVATPPT ATPPVATPPI
0801: AKPPVATPPT TAPPTATPPV AKPPVATPPI ATPPTAKPPI LTPPISKPPV ATPPAATPPI TTPPPAKPPV ATPPIATPPI AKPPVATPPT ATPPIATSPV
0901: AKPPVAIPPI KTPPPAKPPV AIPPIATPPV AKPPVATPPT ATPPIATSPI ATPPVVTPPT ATSPVATPPI AKPPTTTPPT ATPPVAMPPI ATPPTAKPPV
1001: ATPPIANPPV EKPPVATPPI AKPPTVLPPI AKPPVETSPT ATPPTATPPV AIPPVVKPPV AIPPITKPPV ATPPVTNPPT AMPPIVTPPP IVTPPIAKSP
1101: IATPPVSTPP IAKPPIATPP VATTPIAKPP IATPPTANPP VANPPIAKSP IAKPPIATPP TAMPSIATPP IGKPPVATPP MAKPPVASPP IATPPIIKPP
1201: VATPPITKPP VATPPVATPP IAKPPVATSP IETPPVAKPP VTTPPVATPP IVKPPIVTPP IATPPIAKSP IAPPPIGTPP IAKPPVATPP TATPPVATSP
1301: IAKPPVATPP PATPPVAKPP VATPPTVTPP VATPPIAKPP GARPPVATPP VATPPIAKSP VATPPMTKPP VASSPIATPP IAKTPIATPP TTMPKTCPID
1401: TLKLGSCVDL LGGLVHIGIG KSAKEKCCPV VEGLVDLDAA VCLCTTIKAK LLNIDVILPI ALEVLLNCGK NPPPGFKCPA
Arabidopsis Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LIE8]
SUBAcon: [plasma membrane,vacuole,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.