CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:

plasma membrane 5
extracellular 5
endoplasmic reticulum 6
golgi 5
vacuole 6
plastid 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os06t0168700-01	Rice	plastid	40.43	53.25
HORVU7Hr1G027440.2	Barley	extracellular	45.06	51.59
VIT_03s0017g02260.t01	Wine grape	extracellular	30.56	50.77
OQU82307	Sorghum	extracellular, plasma membrane	21.91	47.97
VIT_03s0017g02200.t01	Wine grape	extracellular	30.56	47.37
CDY59805	Canola	extracellular	32.41	44.49
TraesCS7B01G031800.1	Wheat	extracellular	42.9	43.3
Bra037084.1-P	Field mustard	extracellular	34.26	42.53
Bra001852.1-P	Field mustard	extracellular	33.64	41.76
CDY22735	Canola	extracellular	30.25	41.53
AT4G15160.1	Thale cress	extracellular	34.88	41.09
CDY06505	Canola	extracellular	26.23	40.87
Bra038089.1-P	Field mustard	extracellular	31.48	39.84
CDY22936	Canola	plasma membrane	35.49	39.52
CDY09061	Canola	extracellular	31.17	39.45
KRG90032	Soybean	extracellular	37.65	37.2
Bra039563.1-P	Field mustard	plasma membrane	32.41	36.08
Bra023850.1-P	Field mustard	extracellular	25.31	35.65
Bra031329.1-P	Field mustard	extracellular	37.35	35.59
KRH17654	Soybean	extracellular	41.36	34.9
AT3G22120.2	Thale cress	plastid	37.35	34.47
EES12957	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	22.84	34.1
CDY39502	Canola	extracellular	27.78	33.33
PGSC0003DMT400035207	Potato	extracellular	39.81	33.08
EER88705	Sorghum	extracellular	30.56	32.04
CDY19310	Canola	extracellular	26.54	31.85
CDY47794	Canola	extracellular	20.99	30.63
AT3G22142.1	Thale cress	extracellular, plasma membrane, vacuole	29.63	6.49

Protein Annotations

Gene3D:1.10.110.10	MapMan:35.2	EntrezGene:8072348	InterPro:Bifun_inhib/LTP/seed_sf	UniProt:C5Z4Z5	EnsemblPlants:EER89284
ProteinID:EER89284	ProteinID:EER89284.1	InterPro:Hydrophob_seed	PFAM:PF14547	PRINTS:PR01217	PANTHER:PTHR31731
PANTHER:PTHR31731:SF16	EnsemblPlantsGene:SORBI_3010G054800	SUPFAM:SSF47699	SignalP:SignalP-noTM	UniParc:UPI0001A89685	RefSeq:XP_002437917.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:4290952..4292280

Molecular Weight (calculated)

34164.5 Da

IEP (calculated)

9.445

GRAVY (calculated)

-0.347

Length

324 amino acids

Sequence
(BLAST)

001: MATSTSVPVL LLLAAATGLL LPSSLASTSN CPPPAHGGSG GGGRVQPSYP APASGSPKGY RSGGGHSHPP HHGKPPKRHH GPPSNCPPCN PPYVPPTPRP
101: SPPYVPPYVP PTPRPSPPYV PPYVPPTPRP SPPYVPPYVP PTPRPSPPYV PPYVPPTPRP SPPYVPPYVP PTPRPSPPYV PPYVPPTPRP SPPYVPPYVP
201: PTPRPSPPNV PPSPPYVPPY VPPTPPYVPP TPPASRTCPI DTLKLNACVD VLSGLIHLVI GQEARSKCCP LVQGIADLDA ALCLCTTIRL RLLNINIYLP
301: IALNLLITCG KHPPSGFQCP PLYD

Best Arabidopsis Sequence Match ( AT3G22120.2 )
(BLAST)

001: MYLLTHSFQK PKPSFQKMGS RSQNLSFLVL LLLGFVAVSY ACDCTPPKPS PAPHKPPKHP VKPPKPPAVK PPKPPAVKPP TPKPPTVKPH PKPPTVKPHP
101: KPPTVKPHPK PPTVKPPHPK PPTKPHPHPK PPIVKPPTKP PPSTPKPPTK PPPSTPKPPT TKPPPSTPKP PHHKPPPTPC PPPTPTPTPP VVTPPTPTPP
201: VITPPTPTPP VVTPPTPTPP VITPPTPTPP VITPPTPTPP VVTPPTPTPP VVTPPTPTPP TPIPETCPID TLKLGACVDV LGGLIHIGLG KSHAKAECCP
301: VLGGLLDLDA AVCLCTTIKL KLLNIDLVLP IALELLLDCG KTPPSDFKCP A

Arabidopsis Description

CWLPCell wall-plasma membrane linker protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSA3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.