Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d045162_P001 | Maize | nucleus | 58.82 | 62.07 |
| KXG21281 | Sorghum | nucleus | 27.12 | 47.98 |
| EES18996 | Sorghum | nucleus | 40.52 | 43.06 |
| EER89387 | Sorghum | nucleus | 44.44 | 42.77 |
| OQU76057 | Sorghum | nucleus | 42.81 | 42.67 |
| EER89573 | Sorghum | nucleus | 43.79 | 42.41 |
| EER88196 | Sorghum | nucleus | 42.81 | 41.46 |
| KXG21283 | Sorghum | nucleus | 29.74 | 37.3 |
| EER88198 | Sorghum | nucleus | 37.91 | 36.48 |
| OQU77390 | Sorghum | nucleus | 27.78 | 34.84 |
| EES18995 | Sorghum | nucleus | 31.37 | 34.78 |
| EER94504 | Sorghum | nucleus | 32.35 | 34.38 |
| TraesCS1B01G283000.1 | Wheat | nucleus | 19.61 | 33.33 |
| KXG21280 | Sorghum | nucleus | 37.25 | 32.02 |
| TraesCS7B01G019400.1 | Wheat | nucleus | 23.53 | 30.13 |
| EES18997 | Sorghum | nucleus | 36.93 | 30.05 |
| TraesCS7B01G093600.1 | Wheat | nucleus | 17.65 | 30.0 |
| OQU77389 | Sorghum | nucleus | 32.68 | 29.94 |
| TraesCS7A01G188800.1 | Wheat | nucleus | 17.32 | 29.28 |
| TraesCS7B01G019200.1 | Wheat | nucleus | 25.82 | 28.83 |
| HORVU7Hr1G024150.1 | Barley | nucleus | 21.9 | 28.15 |
| TraesCS1D01G362000.1 | Wheat | nucleus | 27.78 | 27.96 |
| HORVU1Hr1G080380.1 | Barley | nucleus | 30.72 | 27.89 |
| HORVU7Hr1G028140.1 | Barley | nucleus | 19.61 | 27.78 |
| TraesCS7A01G135300.1 | Wheat | nucleus | 26.47 | 27.74 |
| TraesCS7D01G118600.1 | Wheat | nucleus | 24.84 | 27.74 |
| TraesCS7A01G120900.1 | Wheat | nucleus | 23.2 | 27.52 |
| KXG21278 | Sorghum | nucleus | 30.72 | 27.33 |
| TraesCS7D01G189800.2 | Wheat | nucleus | 17.65 | 27.27 |
| TraesCS1A01G357600.1 | Wheat | nucleus | 30.72 | 26.86 |
| TraesCS1B01G374300.1 | Wheat | nucleus | 30.72 | 26.86 |
| TraesCS7D01G108000.1 | Wheat | nucleus | 23.86 | 26.64 |
| TraesCS7D01G108100.1 | Wheat | nucleus | 23.53 | 26.37 |
| TraesCS7A01G121100.1 | Wheat | nucleus | 22.88 | 25.55 |
| HORVU7Hr1G025580.1 | Barley | cytosol, nucleus, plastid | 23.53 | 24.16 |
| HORVU7Hr1G038390.1 | Barley | mitochondrion, nucleus, plastid | 15.36 | 22.93 |
| TraesCS7B01G036500.1 | Wheat | nucleus | 30.07 | 21.4 |
| TraesCS7B01G036700.1 | Wheat | nucleus | 29.41 | 21.03 |
| TraesCS7D01G135200.1 | Wheat | nucleus | 29.41 | 20.98 |
| TraesCS7A01G135000.1 | Wheat | nucleus | 29.09 | 20.75 |
| TraesCS7D01G135000.1 | Wheat | nucleus | 28.43 | 20.23 |
| TraesCS7D01G135700.1 | Wheat | nucleus | 28.76 | 20.23 |
| TraesCS7D01G135600.1 | Wheat | nucleus | 23.53 | 20.22 |
| Os06t0173800-00 | Rice | vacuole | 21.57 | 20.18 |
| TraesCS7D01G135300.1 | Wheat | nucleus | 28.1 | 20.0 |
| TraesCS7A01G135200.1 | Wheat | nucleus | 27.78 | 19.81 |
| TraesCS7A01G135100.1 | Wheat | nucleus | 27.78 | 19.81 |
| TraesCS7D01G135500.1 | Wheat | nucleus | 25.49 | 19.45 |
| TraesCS7A01G135400.1 | Wheat | nucleus | 27.12 | 19.3 |
| Solyc02g082380.1.1 | Tomato | nucleus | 13.07 | 18.02 |
| PGSC0003DMT400086891 | Potato | nucleus | 11.11 | 15.74 |
| TraesCS2D01G567700.1 | Wheat | nucleus | 17.32 | 14.02 |
| Solyc02g082390.1.1 | Tomato | nucleus | 12.75 | 13.88 |
| TraesCS2B01G617700.1 | Wheat | nucleus | 17.97 | 13.78 |
| KXG36349 | Sorghum | nucleus | 14.05 | 11.72 |
| PGSC0003DMT400091980 | Potato | nucleus | 13.07 | 9.93 |
| OQU89906 | Sorghum | nucleus | 9.48 | 8.61 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.2 | EntrezGene:8076172 | UniProt:C5Z5B5 | EnsemblPlants:EER89299 | ProteinID:EER89299 |
| ProteinID:EER89299.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:Homeobox-like_sf | InterPro:IPR017930 |
| InterPro:Myb_dom | InterPro:Myb_dom_plants | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR44042 | InterPro:SANT/Myb |
| SMART:SM00717 | EnsemblPlantsGene:SORBI_3010G058000 | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI0001A896D9 | RefSeq:XP_002437932.1 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr10:-:4569120..4570472
Molecular Weight (calculated)
34725.6 Da
IEP (calculated)
9.478
GRAVY (calculated)
-0.858
Length
306 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPNYGEWNA SEIKIVKDLI ASHNANSTSA NDINNKQIDI VDVLQARFPT KEKHKVTNLY ADLMVENMHM MLSGNQHAMV SSKLVNDKFR MPVEHPTMDV
101: SSGDLVEERK AKRKAGEDSH SQPDPQKERQ RRRFWTTDEH RNFLYGLRAF GRSDWKNISK HFVTTRTPVQ ISSHAQKYFR RMENTTKRQR SSINDVGLCD
201: DEPKVQTNAS SLQGFTFTNG TYNSNHYGSN NSQFVAMSNL AKQMWFPSLC CTGQASSSSS NQATTLNRGE AGGSYVAPKM EGAESKTKLS SGEAEDFLFD
301: KWMMRK
101: SSGDLVEERK AKRKAGEDSH SQPDPQKERQ RRRFWTTDEH RNFLYGLRAF GRSDWKNISK HFVTTRTPVQ ISSHAQKYFR RMENTTKRQR SSINDVGLCD
201: DEPKVQTNAS SLQGFTFTNG TYNSNHYGSN NSQFVAMSNL AKQMWFPSLC CTGQASSSSS NQATTLNRGE AGGSYVAPKM EGAESKTKLS SGEAEDFLFD
301: KWMMRK
001: MSSSTMYRGV NMFSPANTNW IFQEVREATW TAEENKRFEK ALAYLDDKDN LESWSKIADL IPGKTVADVI KRYKELEDDV SDIEAGLIPI PGYGGDASSA
101: ANSDYFFGLE NSSYGYDYVV GGKRSSPAMT DCFRSPMPEK ERKKGVPWTE DEHLRFLMGL KKYGKGDWRN IAKSFVTTRT PTQVASHAQK YFLRQLTDGK
201: DKRRSSIHDI TTVNIPDADA SATATTADVA LSPTPANSFD VFLQPNPHYS FASASASSYY NAFPQWS
101: ANSDYFFGLE NSSYGYDYVV GGKRSSPAMT DCFRSPMPEK ERKKGVPWTE DEHLRFLMGL KKYGKGDWRN IAKSFVTTRT PTQVASHAQK YFLRQLTDGK
201: DKRRSSIHDI TTVNIPDADA SATATTADVA LSPTPANSFD VFLQPNPHYS FASASASSYY NAFPQWS
Arabidopsis Description
Duplicated homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LFB6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.