Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU76057 | Sorghum | nucleus | 43.71 | 45.28 |
| EER89299 | Sorghum | nucleus | 42.77 | 44.44 |
| KXG21281 | Sorghum | nucleus | 23.58 | 43.35 |
| EER89573 | Sorghum | nucleus | 38.99 | 39.24 |
| EER88196 | Sorghum | nucleus | 38.36 | 38.61 |
| EES18996 | Sorghum | nucleus | 34.28 | 37.85 |
| KXG21283 | Sorghum | nucleus | 27.04 | 35.25 |
| EER88198 | Sorghum | nucleus | 34.59 | 34.59 |
| OQU77390 | Sorghum | nucleus | 26.1 | 34.02 |
| EER94504 | Sorghum | nucleus | 28.3 | 31.25 |
| EES18995 | Sorghum | nucleus | 27.04 | 31.16 |
| TraesCS7B01G019400.1 | Wheat | nucleus | 22.96 | 30.54 |
| TraesCS1B01G283000.1 | Wheat | nucleus | 16.98 | 30.0 |
| TraesCS7B01G093600.1 | Wheat | nucleus | 16.98 | 30.0 |
| TraesCS7B01G019200.1 | Wheat | nucleus | 25.16 | 29.2 |
| TraesCS7D01G118600.1 | Wheat | nucleus | 24.84 | 28.83 |
| TraesCS7A01G121100.1 | Wheat | nucleus | 24.84 | 28.83 |
| OQU77389 | Sorghum | nucleus | 30.19 | 28.74 |
| TraesCS7A01G188800.1 | Wheat | nucleus | 16.35 | 28.73 |
| EES18997 | Sorghum | nucleus | 33.96 | 28.72 |
| TraesCS7A01G120900.1 | Wheat | nucleus | 23.27 | 28.68 |
| TraesCS7D01G189800.2 | Wheat | nucleus | 17.3 | 27.78 |
| HORVU7Hr1G024150.1 | Barley | nucleus | 20.75 | 27.73 |
| TraesCS7D01G108000.1 | Wheat | nucleus | 23.58 | 27.37 |
| KXG21280 | Sorghum | nucleus | 30.5 | 27.25 |
| KXG21278 | Sorghum | nucleus | 28.62 | 26.45 |
| HORVU1Hr1G080380.1 | Barley | nucleus | 27.67 | 26.11 |
| TraesCS7A01G135300.1 | Wheat | nucleus | 23.9 | 26.03 |
| TraesCS1D01G362000.1 | Wheat | nucleus | 24.84 | 25.99 |
| HORVU7Hr1G025580.1 | Barley | cytosol, nucleus, plastid | 24.21 | 25.84 |
| TraesCS1A01G357600.1 | Wheat | nucleus | 28.3 | 25.71 |
| TraesCS1B01G374300.1 | Wheat | nucleus | 28.3 | 25.71 |
| HORVU7Hr1G028140.1 | Barley | nucleus | 17.3 | 25.46 |
| HORVU7Hr1G038390.1 | Barley | mitochondrion, nucleus, plastid | 16.35 | 25.37 |
| TraesCS7D01G108100.1 | Wheat | nucleus | 21.7 | 25.27 |
| Os06t0173800-00 | Rice | vacuole | 23.27 | 22.63 |
| TraesCS7B01G036500.1 | Wheat | nucleus | 27.99 | 20.7 |
| TraesCS7B01G036700.1 | Wheat | nucleus | 27.36 | 20.33 |
| TraesCS7D01G135200.1 | Wheat | nucleus | 26.73 | 19.81 |
| TraesCS7D01G135000.1 | Wheat | nucleus | 26.42 | 19.53 |
| TraesCS7D01G135300.1 | Wheat | nucleus | 26.42 | 19.53 |
| TraesCS7A01G135100.1 | Wheat | nucleus | 26.1 | 19.35 |
| TraesCS7A01G135200.1 | Wheat | nucleus | 26.1 | 19.35 |
| TraesCS7D01G135700.1 | Wheat | nucleus | 26.1 | 19.08 |
| TraesCS7A01G135400.1 | Wheat | nucleus | 25.79 | 19.07 |
| TraesCS7A01G135000.1 | Wheat | nucleus | 25.47 | 18.88 |
| TraesCS7D01G135600.1 | Wheat | nucleus | 21.07 | 18.82 |
| TraesCS7D01G135500.1 | Wheat | nucleus | 22.64 | 17.96 |
| Solyc02g082380.1.1 | Tomato | nucleus | 11.95 | 17.12 |
| PGSC0003DMT400086891 | Potato | nucleus | 11.01 | 16.2 |
| TraesCS2B01G617700.1 | Wheat | nucleus | 16.98 | 13.53 |
| Solyc02g082390.1.1 | Tomato | nucleus | 11.95 | 13.52 |
| TraesCS2D01G567700.1 | Wheat | nucleus | 16.04 | 13.49 |
| KXG36349 | Sorghum | nucleus | 14.47 | 12.53 |
| PGSC0003DMT400091980 | Potato | nucleus | 12.58 | 9.93 |
| OQU89906 | Sorghum | nucleus | 9.75 | 9.2 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.2 | EntrezGene:8070743 | UniProt:C5Z614 | EnsemblPlants:EER89387 | ProteinID:EER89387 |
| ProteinID:EER89387.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:Homeobox-like_sf | InterPro:IPR017930 |
| InterPro:Myb_dom | InterPro:Myb_dom_plants | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR44042 | PANTHER:PTHR44042:SF3 |
| InterPro:SANT/Myb | SMART:SM00717 | EnsemblPlantsGene:SORBI_3010G075100 | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI0001A897E0 |
| RefSeq:XP_002438020.1 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr10:-:6152418..6153796
Molecular Weight (calculated)
36201.8 Da
IEP (calculated)
7.011
GRAVY (calculated)
-0.665
Length
318 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLNSGEWNA SEIMMAKDLI ASHNTNNNYA YNMYKKHTDN IVDVLQARFP TKGKHQVINL YVDLMVEMLQ TMLSNDHHAT SSSNLVHEES KMSLDVLAME
101: SMDMLGGYPV ESGAKRKAEE APCRQLAPPT KRQRPMKFWT KEEHRNFLHG LVVFGRGDWK NISRYFVTTR TPMQVSSHAQ KYFRRMDSTT KQRCSINDVG
201: LYDVEPWLQN NASSLEGLTF NGATYNPKHN GTSGHLTAMN NLDQQIGLPS LYHADRTSNN NSLAATLVVG QQQQQQQMWA SGSHVALVME RNSNKTTWAG
301: DQEGDFLIDQ WMMNMDMN
101: SMDMLGGYPV ESGAKRKAEE APCRQLAPPT KRQRPMKFWT KEEHRNFLHG LVVFGRGDWK NISRYFVTTR TPMQVSSHAQ KYFRRMDSTT KQRCSINDVG
201: LYDVEPWLQN NASSLEGLTF NGATYNPKHN GTSGHLTAMN NLDQQIGLPS LYHADRTSNN NSLAATLVVG QQQQQQQMWA SGSHVALVME RNSNKTTWAG
301: DQEGDFLIDQ WMMNMDMN
001: MSSSTMYRGV NMFSPANTNW IFQEVREATW TAEENKRFEK ALAYLDDKDN LESWSKIADL IPGKTVADVI KRYKELEDDV SDIEAGLIPI PGYGGDASSA
101: ANSDYFFGLE NSSYGYDYVV GGKRSSPAMT DCFRSPMPEK ERKKGVPWTE DEHLRFLMGL KKYGKGDWRN IAKSFVTTRT PTQVASHAQK YFLRQLTDGK
201: DKRRSSIHDI TTVNIPDADA SATATTADVA LSPTPANSFD VFLQPNPHYS FASASASSYY NAFPQWS
101: ANSDYFFGLE NSSYGYDYVV GGKRSSPAMT DCFRSPMPEK ERKKGVPWTE DEHLRFLMGL KKYGKGDWRN IAKSFVTTRT PTQVASHAQK YFLRQLTDGK
201: DKRRSSIHDI TTVNIPDADA SATATTADVA LSPTPANSFD VFLQPNPHYS FASASASSYY NAFPQWS
Arabidopsis Description
Duplicated homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LFB6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.