Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER88196 | Sorghum | nucleus | 80.38 | 80.38 |
| OQU76057 | Sorghum | nucleus | 66.14 | 68.08 |
| EER88198 | Sorghum | nucleus | 57.28 | 56.92 |
| EER94504 | Sorghum | nucleus | 46.84 | 51.39 |
| KXG21281 | Sorghum | nucleus | 25.0 | 45.66 |
| EER89299 | Sorghum | nucleus | 42.41 | 43.79 |
| KXG21283 | Sorghum | nucleus | 31.01 | 40.16 |
| EES18996 | Sorghum | nucleus | 36.39 | 39.93 |
| EER89387 | Sorghum | nucleus | 39.24 | 38.99 |
| TraesCS1B01G283000.1 | Wheat | nucleus | 20.57 | 36.11 |
| EES18995 | Sorghum | nucleus | 31.33 | 35.87 |
| OQU77390 | Sorghum | nucleus | 27.22 | 35.25 |
| TraesCS7B01G093600.1 | Wheat | nucleus | 18.99 | 33.33 |
| EES18997 | Sorghum | nucleus | 38.92 | 32.71 |
| OQU77389 | Sorghum | nucleus | 34.49 | 32.63 |
| KXG21280 | Sorghum | nucleus | 36.71 | 32.58 |
| TraesCS7A01G188800.1 | Wheat | nucleus | 18.35 | 32.04 |
| TraesCS7B01G019400.1 | Wheat | nucleus | 23.42 | 30.96 |
| TraesCS7D01G189800.2 | Wheat | nucleus | 19.3 | 30.81 |
| TraesCS7B01G019200.1 | Wheat | nucleus | 25.95 | 29.93 |
| TraesCS7A01G120900.1 | Wheat | nucleus | 24.37 | 29.84 |
| TraesCS1B01G374300.1 | Wheat | nucleus | 32.91 | 29.71 |
| TraesCS1D01G362000.1 | Wheat | nucleus | 28.48 | 29.61 |
| TraesCS7A01G135300.1 | Wheat | nucleus | 27.22 | 29.45 |
| TraesCS7D01G118600.1 | Wheat | nucleus | 25.32 | 29.2 |
| HORVU7Hr1G024150.1 | Barley | nucleus | 21.84 | 28.99 |
| HORVU7Hr1G038390.1 | Barley | mitochondrion, nucleus, plastid | 18.67 | 28.78 |
| TraesCS1A01G357600.1 | Wheat | nucleus | 31.65 | 28.57 |
| HORVU7Hr1G028140.1 | Barley | nucleus | 19.3 | 28.24 |
| KXG21278 | Sorghum | nucleus | 30.7 | 28.2 |
| TraesCS7D01G108000.1 | Wheat | nucleus | 24.37 | 28.1 |
| TraesCS7A01G121100.1 | Wheat | nucleus | 24.05 | 27.74 |
| HORVU1Hr1G080380.1 | Barley | nucleus | 29.43 | 27.6 |
| TraesCS7D01G108100.1 | Wheat | nucleus | 23.1 | 26.74 |
| HORVU7Hr1G025580.1 | Barley | cytosol, nucleus, plastid | 25.0 | 26.51 |
| TraesCS7B01G036700.1 | Wheat | nucleus | 30.38 | 22.43 |
| TraesCS7D01G135200.1 | Wheat | nucleus | 29.75 | 21.91 |
| TraesCS7A01G135000.1 | Wheat | nucleus | 29.75 | 21.91 |
| TraesCS7B01G036500.1 | Wheat | nucleus | 29.43 | 21.63 |
| TraesCS7A01G135200.1 | Wheat | nucleus | 29.11 | 21.45 |
| TraesCS7A01G135100.1 | Wheat | nucleus | 28.8 | 21.21 |
| TraesCS7D01G135700.1 | Wheat | nucleus | 28.8 | 20.92 |
| TraesCS7D01G135600.1 | Wheat | nucleus | 23.1 | 20.51 |
| TraesCS7A01G135400.1 | Wheat | nucleus | 27.85 | 20.47 |
| TraesCS7D01G135000.1 | Wheat | nucleus | 27.53 | 20.23 |
| TraesCS7D01G135300.1 | Wheat | nucleus | 27.53 | 20.23 |
| PGSC0003DMT400086891 | Potato | nucleus | 13.29 | 19.44 |
| TraesCS7D01G135500.1 | Wheat | nucleus | 24.37 | 19.2 |
| Os06t0173800-00 | Rice | vacuole | 19.62 | 18.96 |
| Solyc02g082380.1.1 | Tomato | nucleus | 12.66 | 18.02 |
| TraesCS2B01G617700.1 | Wheat | nucleus | 19.94 | 15.79 |
| TraesCS2D01G567700.1 | Wheat | nucleus | 18.35 | 15.34 |
| Solyc02g082390.1.1 | Tomato | nucleus | 12.97 | 14.59 |
| KXG36349 | Sorghum | nucleus | 13.29 | 11.44 |
| PGSC0003DMT400091980 | Potato | nucleus | 12.66 | 9.93 |
| OQU89906 | Sorghum | nucleus | 8.54 | 8.01 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.2 | EntrezGene:8065771 | UniProt:C5Z845 | EnsemblPlants:EER89573 | ProteinID:EER89573 |
| ProteinID:EER89573.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:Homeobox-like_sf | InterPro:IPR017930 |
| InterPro:Myb_dom | InterPro:Myb_dom_plants | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR44042 | InterPro:SANT/Myb |
| SMART:SM00717 | EnsemblPlantsGene:SORBI_3010G109700 | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI0001A89A15 | RefSeq:XP_002438206.1 |
Description
hypothetical protein
Coordinates
chr10:-:10961882..10963259
Molecular Weight (calculated)
35892.3 Da
IEP (calculated)
8.658
GRAVY (calculated)
-0.714
Length
316 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPKLKGEWS AYEIMMVKSL IARDNTNNNY VGDMNKKHNQ IVDELQAMFP SKEKYQVTNL YIDVMVEMTQ TLQSGNQHVE ASSNLINQPF GVFVGDPSMG
101: NKEAFDGYKQ VEMFGMRNVM ETPRNRPTPR KDSQHIGRFW TINEHRQFLR GLHVYGRGNW KNISKHFVTT KTPVQVSSHA QKYFLRKENG TKKQRYSIND
201: IGLYDFEPLP QTNASAWEGH TSGGGVYNTN QYRFGGHPTS MSNAQAWSPF LYHTVHTSRS NSLMASLAIG QQQEQMGASS SLVAPTMEAD GGHLELTSDK
301: LGNLFDTQWM MNADMN
101: NKEAFDGYKQ VEMFGMRNVM ETPRNRPTPR KDSQHIGRFW TINEHRQFLR GLHVYGRGNW KNISKHFVTT KTPVQVSSHA QKYFLRKENG TKKQRYSIND
201: IGLYDFEPLP QTNASAWEGH TSGGGVYNTN QYRFGGHPTS MSNAQAWSPF LYHTVHTSRS NSLMASLAIG QQQEQMGASS SLVAPTMEAD GGHLELTSDK
301: LGNLFDTQWM MNADMN
001: MNRGIEVMSP ATYLETSNWL FQENRGTKWT AEENKKFENA LAFYDKDTPD RWSRVAAMLP GKTVGDVIKQ YRELEEDVSD IEAGLIPIPG YASDSFTLDW
101: GGYDGASGNN GFNMNGYYFS AAGGKRGSAA RTAEHERKKG VPWTEEEHRQ FLMGLKKYGK GDWRNIARNF VTTRTPTQVA SHAQKYFIRQ VNGGKDKRRS
201: SIHDITTVNI PDSPDAAAAD NATANAPCSP PSVGGNQRET SEWEGQTLYD ETAAAFYNQN AFSETLLGMS STPYMAKLQE QSFLNASQFE SYNAYLQM
101: GGYDGASGNN GFNMNGYYFS AAGGKRGSAA RTAEHERKKG VPWTEEEHRQ FLMGLKKYGK GDWRNIARNF VTTRTPTQVA SHAQKYFIRQ VNGGKDKRRS
201: SIHDITTVNI PDSPDAAAAD NATANAPCSP PSVGGNQRET SEWEGQTLYD ETAAAFYNQN AFSETLLGMS STPYMAKLQE QSFLNASQFE SYNAYLQM
Arabidopsis Description
Duplicated homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8GXN7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.