CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033991_P002	Maize	plastid	92.93	88.46
Zm00001d013288_P003	Maize	plastid	89.39	85.92
Os03t0745700-00	Rice	plasma membrane	79.29	77.15
TraesCS5D01G393800.1	Wheat	cytosol	69.95	73.87
TraesCS5A01G384200.1	Wheat	cytosol	70.2	73.16
TraesCS5B01G389000.1	Wheat	cytosol	70.71	73.11
HORVU5Hr1G094510.2	Barley	cytosol, plastid	71.46	72.94
KXG23933	Sorghum	cytosol	55.81	59.73
KXG37965	Sorghum	cytosol	56.06	58.73
EES19998	Sorghum	cytosol	51.77	54.09
EES01155	Sorghum	cytosol	51.52	53.26

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.30	Gene3D:3.30.200.20	EntrezGene:8060481	UniProt:C5X171	EnsemblPlants:EER93470
ProteinID:EER93470	ProteinID:EER93470.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009506	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	GO:GO:0035556	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000654
PRINTS:PR00109	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR44084	PANTHER:PTHR44084:SF3	InterPro:Prot_kinase_dom
SMART:SM00220	EnsemblPlantsGene:SORBI_3001G092500	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001A826ED
RefSeq:XP_002466472.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:7139764..7143580

Molecular Weight (calculated)

44004.6 Da

IEP (calculated)

8.708

GRAVY (calculated)

-0.421

Length

396 amino acids

Sequence
(BLAST)

001: MSSTARGGAA RGRSRSFGSR SSNGADGNGA GMFVRAGADN EMYVRADKID FKNLDVQLEK TRSHVWLEHQ RSQRSASPRP ETPLLEWEID LAKLDIQNQI
101: AHGTFGVVYR GTYDGHDVAV KVLDWGRDGQ DTAAKHREAF EKEVAVWQKL DHPNVTKFVG ASMGTSHLKI PKKGSSSFRA NECCVVVVEF QHGGTLKTLM
201: YNHRDKKLSY KKVVRLALDL ARGLSYLHSK KIMHRDVKAE NMLLDRKRTL KIADFGVARV EAQSCEVTGQ TGTLGYMAPE VLQGKPYDHK CDVYSFGIVL
301: WETYCCAMAY PNYSLADISY HVVKLGIRPD IPRCCPRAMA DIMTRCWDGN PDNRPEMAEV VALLEKIDTS SGKGGMTPID EVAQGCSCFG FNRSVA

Best Arabidopsis Sequence Match ( AT3G01490.1 )
(BLAST)

001: MKEKAESGGG VGYVRADQID LKSLDEQLQR HLSKAWTMEK RKSLSDGEDN VNNTRHNQNN FGHRQLVFQR PLLGGGYSNN NNSSKNDIIR STEVEKSRRE
101: WEIDPSKLII KSVIARGTFG TVHRGIYDGQ DVAVKLLDWG EEGHRSDAEI ASLRAAFTQE VAVWHKLDHP NVTKFIGAAM GTSEMSIQTE NGQMGMPSNV
201: CCVVVEYCPG GALKSFLIKT RRRKLAFKVV IQLSLDLARG LSYLHSQKIV HRDVKTENML LDKSRTLKIA DFGVARLEAS NPNDMTGETG TLGYMAPEVL
301: NGSPYNRKCD VYSFGICLWE IYCCDMPYPD LSFSEVTSAV VRQNLRPEIP RCCPSSLANV MKRCWDANPE KRPEMEEVVA MLEAIDTSKG GGMIPPDQQQ
401: GCFCFRRHRG P

Arabidopsis Description

AT3g01490/F4P13_4 [Source:UniProtKB/TrEMBL;Acc:Q9SSA4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.