Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER88198 | Sorghum | nucleus | 77.08 | 69.81 |
| OQU76057 | Sorghum | nucleus | 51.39 | 48.21 |
| EER89573 | Sorghum | nucleus | 51.39 | 46.84 |
| EER88196 | Sorghum | nucleus | 50.69 | 46.2 |
| KXG21281 | Sorghum | nucleus | 22.92 | 38.15 |
| TraesCS1B01G283000.1 | Wheat | nucleus | 22.92 | 36.67 |
| EES18996 | Sorghum | nucleus | 35.42 | 35.42 |
| KXG21283 | Sorghum | nucleus | 29.86 | 35.25 |
| TraesCS7B01G093600.1 | Wheat | nucleus | 20.83 | 33.33 |
| OQU77390 | Sorghum | nucleus | 27.43 | 32.38 |
| EER89299 | Sorghum | nucleus | 34.38 | 32.35 |
| EES18995 | Sorghum | nucleus | 30.9 | 32.25 |
| TraesCS7A01G188800.1 | Wheat | nucleus | 20.14 | 32.04 |
| OQU77389 | Sorghum | nucleus | 36.81 | 31.74 |
| TraesCS7D01G189800.2 | Wheat | nucleus | 21.18 | 30.81 |
| EER89387 | Sorghum | nucleus | 31.25 | 28.3 |
| KXG21280 | Sorghum | nucleus | 34.72 | 28.09 |
| KXG21278 | Sorghum | nucleus | 32.99 | 27.62 |
| EES18997 | Sorghum | nucleus | 35.76 | 27.39 |
| HORVU7Hr1G024150.1 | Barley | nucleus | 22.57 | 27.31 |
| TraesCS7A01G120900.1 | Wheat | nucleus | 24.31 | 27.13 |
| TraesCS7D01G108000.1 | Wheat | nucleus | 25.69 | 27.01 |
| TraesCS7B01G019400.1 | Wheat | nucleus | 22.22 | 26.78 |
| HORVU7Hr1G038390.1 | Barley | mitochondrion, nucleus, plastid | 18.4 | 25.85 |
| TraesCS1D01G362000.1 | Wheat | nucleus | 27.08 | 25.66 |
| TraesCS7D01G118600.1 | Wheat | nucleus | 24.31 | 25.55 |
| TraesCS7B01G019200.1 | Wheat | nucleus | 24.31 | 25.55 |
| HORVU7Hr1G025580.1 | Barley | cytosol, nucleus, plastid | 25.0 | 24.16 |
| HORVU7Hr1G028140.1 | Barley | nucleus | 18.06 | 24.07 |
| HORVU1Hr1G080380.1 | Barley | nucleus | 28.12 | 24.04 |
| TraesCS1B01G374300.1 | Wheat | nucleus | 29.17 | 24.0 |
| TraesCS1A01G357600.1 | Wheat | nucleus | 29.17 | 24.0 |
| TraesCS7A01G121100.1 | Wheat | nucleus | 22.57 | 23.72 |
| TraesCS7D01G108100.1 | Wheat | nucleus | 21.53 | 22.71 |
| TraesCS7A01G135300.1 | Wheat | nucleus | 22.92 | 22.6 |
| PGSC0003DMT400086891 | Potato | nucleus | 13.54 | 18.06 |
| Solyc02g082380.1.1 | Tomato | nucleus | 13.89 | 18.02 |
| TraesCS7B01G036700.1 | Wheat | nucleus | 26.39 | 17.76 |
| TraesCS7D01G135200.1 | Wheat | nucleus | 26.39 | 17.72 |
| TraesCS7A01G135200.1 | Wheat | nucleus | 25.69 | 17.25 |
| TraesCS7D01G135700.1 | Wheat | nucleus | 26.04 | 17.24 |
| TraesCS7D01G135300.1 | Wheat | nucleus | 25.69 | 17.21 |
| TraesCS7A01G135100.1 | Wheat | nucleus | 25.35 | 17.02 |
| TraesCS7B01G036500.1 | Wheat | nucleus | 25.35 | 16.98 |
| TraesCS7A01G135000.1 | Wheat | nucleus | 25.0 | 16.78 |
| TraesCS7A01G135400.1 | Wheat | nucleus | 25.0 | 16.74 |
| TraesCS7D01G135000.1 | Wheat | nucleus | 24.65 | 16.51 |
| Os06t0173800-00 | Rice | vacuole | 18.4 | 16.21 |
| TraesCS7D01G135500.1 | Wheat | nucleus | 21.88 | 15.71 |
| TraesCS7D01G135600.1 | Wheat | nucleus | 18.75 | 15.17 |
| TraesCS2B01G617700.1 | Wheat | nucleus | 20.83 | 15.04 |
| TraesCS2D01G567700.1 | Wheat | nucleus | 19.1 | 14.55 |
| Solyc02g082390.1.1 | Tomato | nucleus | 13.89 | 14.23 |
| PGSC0003DMT400091980 | Potato | nucleus | 14.93 | 10.67 |
| KXG36349 | Sorghum | nucleus | 12.85 | 10.08 |
| OQU89906 | Sorghum | nucleus | 10.07 | 8.61 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.2 | EntrezGene:8058093 | UniProt:C5WSF4 | EnsemblPlants:EER94504 | ProteinID:EER94504 |
| ProteinID:EER94504.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:Homeobox-like_sf | InterPro:IPR017930 |
| InterPro:Myb_dom | InterPro:Myb_dom_plants | PFAM:PF00249 | PFscan:PS51294 | InterPro:SANT/Myb | SMART:SM00717 |
| EnsemblPlantsGene:SORBI_3001G301100 | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI0001A82F46 | RefSeq:XP_002467506.1 | : |
Description
hypothetical protein
Coordinates
chr1:-:58268051..58269472
Molecular Weight (calculated)
32559.0 Da
IEP (calculated)
8.268
GRAVY (calculated)
-0.863
Length
288 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPKFKGEWS ASEVSMVKSL IEVDNANNNC ASDMNKKHNQ IMDELQSGNQ HVEASSNLMN QPFGVFVGGL SMGNMEAFGG YQKEMFSTRN VKETPRRKPT
101: PRKESQHNRR FWTTDEHRQF LRGLHVYGRG NWKNISRHFV TSKTPVQVSS HAQKYFLRKE NGTKKQRYSI NDIGLYDFEP LPQTNASAWE GATSGGGVYN
201: TNHYSFCGHP TSINNAHAWS SVQYHTGHGS SNNIQMPTLA IGQQQEQMGT SSSLVAPTME ADRGHLDWTS DKLGDLLDTQ WMMNMDMN
101: PRKESQHNRR FWTTDEHRQF LRGLHVYGRG NWKNISRHFV TSKTPVQVSS HAQKYFLRKE NGTKKQRYSI NDIGLYDFEP LPQTNASAWE GATSGGGVYN
201: TNHYSFCGHP TSINNAHAWS SVQYHTGHGS SNNIQMPTLA IGQQQEQMGT SSSLVAPTME ADRGHLDWTS DKLGDLLDTQ WMMNMDMN
001: MNRGIEVMSP ATYLETSNWL FQENRGTKWT AEENKKFENA LAFYDKDTPD RWSRVAAMLP GKTVGDVIKQ YRELEEDVSD IEAGLIPIPG YASDSFTLDW
101: GGYDGASGNN GFNMNGYYFS AAGGKRGSAA RTAEHERKKG VPWTEEEHRQ FLMGLKKYGK GDWRNIARNF VTTRTPTQVA SHAQKYFIRQ VNGGKDKRRS
201: SIHDITTVNI PDSPDAAAAD NATANAPCSP PSVGGNQRET SEWEGQTLYD ETAAAFYNQN AFSETLLGMS STPYMAKLQE QSFLNASQFE SYNAYLQM
101: GGYDGASGNN GFNMNGYYFS AAGGKRGSAA RTAEHERKKG VPWTEEEHRQ FLMGLKKYGK GDWRNIARNF VTTRTPTQVA SHAQKYFIRQ VNGGKDKRRS
201: SIHDITTVNI PDSPDAAAAD NATANAPCSP PSVGGNQRET SEWEGQTLYD ETAAAFYNQN AFSETLLGMS STPYMAKLQE QSFLNASQFE SYNAYLQM
Arabidopsis Description
Duplicated homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8GXN7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.