CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d005445_P001	Maize	nucleus	72.68	90.37
TraesCS2D01G240000.1	Wheat	nucleus	79.3	83.41
TraesCS2A01G235400.1	Wheat	nucleus	78.45	83.13
TraesCS2B01G254700.1	Wheat	nucleus	78.73	83.06
HORVU2Hr1G053260.1	Barley	nucleus	78.73	82.94
Os07t0435900-01	Rice	nucleus	79.86	82.89
Zm00001d019520_P001	Maize	nucleus	72.96	78.84
GSMUA_Achr5P13120_001	Banana	nucleus	54.37	63.59
GSMUA_Achr4P29270_001	Banana	nucleus	45.92	60.59
GSMUA_Achr1P01130_001	Banana	nucleus	46.2	59.64
VIT_05s0049g02220.t01	Wine grape	nucleus	49.86	52.68
CDX78210	Canola	nucleus	45.07	50.71
CDX73506	Canola	nucleus	45.07	50.55
Bra007048.1-P	Field mustard	nucleus	44.79	50.4
AT2G33290.2	Thale cress	nucleus	45.49	49.62
PGSC0003DMT400003956	Potato	nucleus	48.45	49.43
PGSC0003DMT400075191	Potato	nucleus	45.92	49.39
Solyc09g090810.1.1	Tomato	nucleus	48.31	49.28
Solyc12g096990.1.1	Tomato	nucleus	46.06	49.17
AT4G13460.2	Thale cress	nucleus	44.51	48.62
GSMUA_Achr6P36730_001	Banana	nucleus	40.0	48.14
CDY23755	Canola	nucleus	42.96	47.88
CDY37735	Canola	nucleus, plastid	42.25	47.1
Bra021840.1-P	Field mustard	nucleus, plastid	42.11	46.94
CDY19475	Canola	nucleus	35.49	45.65
KRH49479	Soybean	nucleus	44.65	44.71
CDY17156	Canola	nucleus	35.21	44.17
KRG89164	Soybean	nucleus	44.51	44.13
Bra005511.1-P	Field mustard	plastid	36.34	42.09
KRH07636	Soybean	nucleus	33.8	41.74
EES14036	Sorghum	nucleus	37.89	40.39
OQU80399	Sorghum	nucleus	25.21	31.4
EES19725	Sorghum	nucleus	27.32	28.78
OQU78645	Sorghum	nucleus	29.86	28.42
EES01635	Sorghum	nucleus	28.87	27.63
OQU88147	Sorghum	nucleus	25.07	25.65
EER96081	Sorghum	nucleus	29.01	24.82
EES10399	Sorghum	nucleus	28.45	24.66
OQU77925	Sorghum	nucleus	25.21	23.74
EES01534	Sorghum	nucleus	10.7	22.42
EES05802	Sorghum	nucleus	22.39	20.2
EES12588	Sorghum	nucleus	23.94	19.08
EES13797	Sorghum	nucleus	26.34	16.53
EER96634	Sorghum	nucleus	27.04	15.41
EES13798	Sorghum	nucleus	26.34	14.84
OQU80395	Sorghum	nucleus	12.39	14.84
OQU85329	Sorghum	nucleus	13.66	14.31
EES15150	Sorghum	nucleus	14.23	13.67
EES13161	Sorghum	nucleus	13.52	12.18
KXG30908	Sorghum	nucleus	16.06	7.16

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.7	MapMan:12.5.1.1	Gene3D:2.170.270.10	Gene3D:2.30.280.10	EntrezGene:8059729
UniProt:C5X500	EnsemblPlants:EER96294	ProteinID:EER96294	ProteinID:EER96294.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005694	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009987
GO:GO:0016043	GO:GO:0016571	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0034968
GO:GO:0042393	InterPro:Hist-Lys_N-MeTrfase_plant	InterPro:IPR001214	InterPro:IPR003105	InterPro:IPR007728	InterPro:IPR025794
InterPro:IPR036987	PFAM:PF00856	PFAM:PF02182	PFAM:PF05033	PFscan:PS50280	PFscan:PS50867
PFscan:PS51015	PFscan:PS51575	PANTHER:PTHR22884	PANTHER:PTHR22884:SF95	InterPro:PUA-like_sf	InterPro:Pre-SET_dom
InterPro:SET_dom	SMART:SM00317	SMART:SM00466	SMART:SM00468	EnsemblPlantsGene:SORBI_3002G119600	InterPro:SRA-YDG_sf
InterPro:SRA_YDG	SUPFAM:SSF82199	SUPFAM:SSF88697	UniParc:UPI0001A8350E	RefSeq:XP_002459773.1	SEG:seg

Description

hypothetical protein

Coordinates

chr2:+:15072988..15078229

Molecular Weight (calculated)

77510.3 Da

IEP (calculated)

5.174

GRAVY (calculated)

-0.202

Length

710 amino acids

Sequence
(BLAST)

001: MRREGLGNFG VEEEEAREDG QGSLFMEMDV EESSPSSSLM SSPAGSSDSI DLNFLPFLKR EPKSEPGSPE LGPLPLPTQT PPPQHAAAPA PAPAPEASVP
101: LPPATPDLSS APVMAPLQSL PPNQDVDAVL QEYYRLASLY VSSTGSGAIV PAPAPEATAP AVVQSASGSV VKKRRPRSSD LVRVSSLGVQ DQIYFRDLVR
201: RARITFECLR GLLLRDDERA ESLGLPGVAG FGVARERRRV RADLRAAAIM ADHDLWLNRD RRIVGPLPGI SVGDAFFFRM ELCVLGLHGQ VQAGIDYVSA
301: GRSASGEPIA TSIIVSGGYE DDDDHGDVLV YTGHGGRDPN LHKHCVDQKL EGGNLALERS MAYGIEIRVI RAVKSRRSPV GKVYFYDGLY KVVDYWLDRG
401: KSGFGVYKYR MLRIEGQEPM GTVNYQVAEQ LKVDVLAIRP TGYLSFDISM GRETLPVALF NDVDDDQDPL LFEYLARPIF PTSAVQGKFA EGGGGGCDCA
501: GICSIGCNCA GRNGGEFAYD KTGTLLRGKP LVYECGPYCR CPPSCPNRVS QKGLQHKLEV FRSRETGWGV RSLDLIKAGT FICEFSGIVL THQQSEIVAA
601: NGDCLVRPSR FPPRWLDWGD ISDVNPDYVA PNHPAIPELN FAIDVSRARN VACYFSHSCS PNVFVQFVLF DHYNASYPHL MIFAMENIPP LRELSIDYGM
701: VDEWVGQLTM

Best Arabidopsis Sequence Match ( AT2G33290.1 )
(BLAST)

001: MSTLLPFPDL NLMPDSQSST AGTTAGDTVV TGKLEVKSEP IEEWQTPPSS TSDQSANTDL IAEFIRISEL FRSAFKPLQV KGLDGVSVYG LDSGAIVAVP
101: EKENRELIEP PPGFKDNRVS TVVVSPKFER PRELARIAIL GHEQRKELRQ VMKRTRMTYE SLRIHLMAES MKNHVLGQGR RRRSDMAAAY IMRDRGLWLN
201: YDKHIVGPVT GVEVGDIFFY RMELCVLGLH GQTQAGIDCL TAERSATGEP IATSIVVSGG YEDDEDTGDV LVYTGHGGQD HQHKQCDNQR LVGGNLGMER
301: SMHYGIEVRV IRGIKYENSI SSKVYVYDGL YKIVDWWFAV GKSGFGVFKF RLVRIEGQPM MGSAVMRFAQ TLRNKPSMVR PTGYVSFDLS NKKENVPVFL
401: YNDVDGDQEP RHYEYIAKAV FPPGIFGQGG ISRTGCECKL SCTDDCLCAR KNGGEFAYDD NGHLLKGKHV VFECGEFCTC GPSCKSRVTQ KGLRNRLEVF
501: RSKETGWGVR TLDLIEAGAF ICEYAGVVVT RLQAEILSMN GDVMVYPGRF TDQWRNWGDL SQVYPDFVRP NYPSLPPLDF SMDVSRMRNV ACYISHSKEP
601: NVMVQFVLHD HNHLMFPRVM LFALENISPL AELSLDYGLA DEVNGKLAIC N

Arabidopsis Description

SUVH2Histone-lysine N-methyltransferase family member SUVH2 [Source:UniProtKB/Swiss-Prot;Acc:O22781]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.