CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU80399	Sorghum	nucleus	35.87	78.42
Zm00001d005650_P001	Maize	plastid	81.38	77.94
Os09t0362900-01	Rice	mitochondrion, nucleus	41.57	56.24
TraesCS5D01G197700.2	Wheat	plastid	50.88	55.91
TraesCS5B01G190000.1	Wheat	plastid	50.0	54.6
HORVU5Hr1G057440.1	Barley	plastid	50.0	53.57
TraesCS5A01G194500.1	Wheat	plastid	49.6	53.32
TraesCS5B01G185700.3	Wheat	nucleus	32.99	37.06
EES13797	Sorghum	nucleus	32.42	35.72
TraesCS5A01G197900.1	Wheat	nucleus	27.61	34.68
EES13798	Sorghum	nucleus	34.83	34.44
TraesCS5D01G193000.2	Wheat	nucleus	30.74	34.11
HORVU5Hr1G041830.2	Barley	nucleus, plastid	32.02	32.41
EES05802	Sorghum	nucleus	19.9	31.51
OQU80395	Sorghum	nucleus	14.77	31.03
EES19725	Sorghum	nucleus	16.45	30.42
EES12588	Sorghum	nucleus	21.59	30.19
OQU88147	Sorghum	nucleus	15.97	28.67
EES01635	Sorghum	nucleus	17.01	28.57
OQU77925	Sorghum	nucleus	16.85	27.85
EES14036	Sorghum	nucleus	14.85	27.78
OQU78645	Sorghum	nucleus	16.21	27.08
EER96294	Sorghum	nucleus	15.41	27.04
EER96081	Sorghum	nucleus	17.34	26.02
EES10399	Sorghum	nucleus	17.09	26.01
EES01534	Sorghum	nucleus	7.06	25.96
OQU85329	Sorghum	nucleus	8.91	16.37
EES15150	Sorghum	nucleus	9.15	15.43
EES13161	Sorghum	nucleus	9.15	14.47
KXG30908	Sorghum	nucleus	11.16	8.73

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.7	Gene3D:2.170.270.10	Gene3D:2.30.280.10	EntrezGene:8055575	UniProt:C5XAP1
EnsemblPlants:EER96634	ProteinID:EER96634	ProteinID:EER96634.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005694
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008270	GO:GO:0009987
GO:GO:0016043	GO:GO:0016571	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0032259
GO:GO:0034968	GO:GO:0042393	InterPro:Hist-Lys_N-MeTrfase_plant	InterPro:IPR001214	InterPro:IPR003105	InterPro:IPR003616
InterPro:IPR007728	InterPro:IPR025794	InterPro:IPR036987	PFAM:PF00856	PFAM:PF02182	PFAM:PF05033
PFscan:PS50280	PFscan:PS50867	PFscan:PS50868	PFscan:PS51015	PFscan:PS51575	PANTHER:PTHR22884
PANTHER:PTHR22884:SF458	InterPro:PUA-like_sf	InterPro:Post-SET_dom	InterPro:Pre-SET_dom	InterPro:SET_dom	SMART:SM00317
SMART:SM00466	SMART:SM00468	EnsemblPlantsGene:SORBI_3002G180900	InterPro:SRA-YDG_sf	InterPro:SRA_YDG	SUPFAM:SSF82199
SUPFAM:SSF88697	unigene:Sbi.20776	UniParc:UPI0001A839F0	RefSeq:XP_002460113.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr2:+:56211019..56215844

Molecular Weight (calculated)

132844.0 Da

IEP (calculated)

8.017

GRAVY (calculated)

-0.526

Length

1246 amino acids

Sequence
(BLAST)

0001: MPAAGVEPPA PPAEAAAAAG RRLRPSRVSA KRSWPPGCGR FPAPPPAPAS AAAAGPEVNG VDGASTVVGG RVDEAAAPAV ISPSVQNGCP DKVEEAVATA
0101: TVSPVRQNGA PPPQEGSEKP VDQNGALPQP EENKVEAVAA SLPAARSSAL PHVLPQSGPE RARQDGDGGE NGEAQLLRDA GELPSDGQQG NRVVQVVVPT
0201: VALLGSCSIV GASSVQNGDK GDGLLVAEEK GGGGSSDVGQ EVAVNGDVTE IGNKTGGSEL QRKENGIAAR RTKRWLESSL NPPPKKRAVS AVRRFPPGCG
0301: RTAVTTEVSE VLKGSPVHTF SPGCGRATVT TTDTAVLDVS PISTFPPGCV RSSVKTTGSG DEWLPSEATP ANNGDALVAS LVLGESTSPT LALEPPNKKL
0401: ESKKIVDEGH SKAHNRVQVR DDFAGTKQDG DQRNAVPKST PRNVSDGKMK GKLSAHKGKQ VAQEVVDDKM KNKLDGSLQR SNLRTPLSNS IDSKTKVKRL
0501: DSDKMNVGLL GNAGASAGGK MESKTLSAKK EVACSNMNTK QKKIARKLKG DGIGKDNLHS SARESKLGKH VATNQIEEPN QIVVQALMAP DNCPWTRGRK
0601: SIASASKSLV PRNKIKGKDA TPKDIPARKV DFSESINDET MNDNETQGRK SIVSTSKSLV PMNKLDATPN GIPIGKVASF EVSNDEAMDG NDDINLEDDD
0701: NSRALVVYGE KREICVTVLP SIPSGSHHRQ PRDHDIDARS KVRKLLQLFQ ATYRKLTQVE EQGKRKVGRI DLEAAKALKS DPIYKKIGAV VGNIPGVEVG
0801: DEFHFRVELS IVGLHRPLQG GIDDAKVNGV PVALSIVASG GYPDELSSSG ELIYTGSGGK AGKNKGGDDQ KLARGNLALK NCIKTKSPVR VIHGFKGQSR
0901: SEGGHSKGKQ TTTFTYDGLY EVLECWQEGP KGEMVFKYKL QRIAGQPELA LHAVKATRKS KVREGLCLPD ISQGTERIPI CVINTIDDMK PAPFKYITKV
1001: IYPALFEKEP PKGCNCTNGC SDSISCACAV KNGGEIPFNF NGAIVEARPL IYECGPSCRC PPTCHNRVSQ HGIKIPLEIF KTGKTGWGVR SLSSISSGSF
1101: ICEYTGELLK DEEAEKRQND EYLFDIGNNY HDEELWEGLK SVVGVGSSTS SSETMEGFTI DAAECGNVGR FINHSCSPNL YAQNVLWDHD DMRMPHVMLF
1201: AVENIPPLQE LTYHYNYSVG EVYDKNHEEK VKHCYCGASD CCGRLY

Best Arabidopsis Sequence Match ( AT2G35160.5 )
(BLAST)

001: MGRRKSKRFK VAAESEFSPD FGSITRQLRS RRMQKEFTVE TYETRNVSDV CVLSSQADVE LIPGEIVAER DSFKSVDCND MSVGLTEGAE SLGVNMQEPM
101: KDRNMPENTS EQNMVEVHPP SISLPEEDMM GSVCRKSITG TKELHGRTIS VGRDLSPNMG SKFSKNGKTA KRSISVEEEN LVLEKSDSGD HLGPSPEVLE
201: LEKSEVWIIT DKGVVMPSPV KPSEKRNGDY GEGSMRKNSE RVALDKKRLA SKFRLSNGGL PSCSSSGDSA RYKVKETMRL FHETCKKIMQ EEEARPRKRD
301: GGNFKVVCEA SKILKSKGKN LYSGTQIIGT VPGVEVGDEF QYRMELNLLG IHRPSQSGID YMKDDGGELV ATSIVSSGGY NDVLDNSDVL IYTGQGGNVG
401: KKKNNEPPKD QQLVTGNLAL KNSINKKNPV RVIRGIKNTT LQSSVVAKNY VYDGLYLVEE YWEETGSHGK LVFKFKLRRI PGQPELPWKE VAKSKKSEFR
501: DGLCNVDITE GKETLPICAV NNLDDEKPPP FIYTAKMIYP DWCRPIPPKS CGCTNGCSKS KNCACIVKNG GKIPYYDGAI VEIKPLVYEC GPHCKCPPSC
601: NMRVSQHGIK IKLEIFKTES RGWGVRSLES IPIGSFICEY AGELLEDKQA ESLTGKDEYL FDLGDEDDPF TINAAQKGNI GRFINHSCSP NLYAQDVLYD
701: HEEIRIPHIM FFALDNIPPL QELSYDYNYK IDQVYDSNGN IKKKFCYCGS AECSGRLY

Arabidopsis Description

SUVH5Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 [Source:UniProtKB/Swiss-Prot;Acc:O82175]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.