Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 2
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d006443_P001 | Maize | nucleus | 91.9 | 89.04 |
| Os07t0492100-01 | Rice | plastid | 77.97 | 79.31 |
| TraesCS2A01G226500.1 | Wheat | plastid | 78.57 | 77.97 |
| TraesCS2D01G237200.2 | Wheat | plastid | 78.48 | 77.44 |
| HORVU2Hr1G051300.27 | Barley | plastid | 77.64 | 75.72 |
| GSMUA_Achr4P26310_001 | Banana | cytosol | 5.65 | 75.28 |
| Solyc03g093850.1.1 | Tomato | cytosol | 33.59 | 65.35 |
| GSMUA_Achr4P26320_001 | Banana | cytosol, mitochondrion, nucleus | 46.16 | 59.98 |
| CDY11056 | Canola | nucleus, plastid | 48.61 | 52.65 |
| CDX92677 | Canola | nucleus, plastid | 48.61 | 52.6 |
| AT4G25120.1 | Thale cress | nucleus | 49.7 | 51.35 |
| VIT_16s0013g00300.t01 | Wine grape | nucleus | 46.33 | 50.79 |
| Bra019188.1-P | Field mustard | nucleus | 48.52 | 50.44 |
| Solyc03g093840.1.1 | Tomato | endoplasmic reticulum | 9.45 | 47.26 |
| KRH33265 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 7.0 | 37.73 |
| TraesCS2B01G254500.1 | Wheat | plastid | 5.74 | 18.43 |
Protein Annotations
| Gene3D:1.10.10.160 | Gene3D:1.10.486.10 | Gene3D:3.40.50.300 | MapMan:35.1 | EntrezGene:8077472 | UniProt:C5X9A5 |
| ncoils:Coil | InterPro:DExx_box_DNA_helicase_dom_sf | InterPro:DNA_helicase_UvrD-like_C | InterPro:DNA_helicase_UvrD/REP | EnsemblPlants:EER97255 | ProteinID:EER97255 |
| ProteinID:EER97255.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003678 |
| GO:GO:0003824 | GO:GO:0004003 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006139 | GO:GO:0006259 |
| GO:GO:0006310 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016787 |
| GO:GO:0032508 | GO:GO:0036292 | GO:GO:0043138 | InterPro:IPR013986 | InterPro:IPR014016 | InterPro:IPR014017 |
| InterPro:P-loop_NTPase | PFAM:PF00580 | PFAM:PF13361 | PFscan:PS51198 | PFscan:PS51217 | PANTHER:PTHR11070 |
| PANTHER:PTHR11070:SF2 | EnsemblPlantsGene:SORBI_3002G310300 | SUPFAM:SSF52540 | UniParc:UPI0001A834CF | InterPro:UvrD-like_ATP-bd | InterPro:UvrD/AddA_N |
| RefSeq:XP_002460734.1 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr2:+:68423006..68435778
Molecular Weight (calculated)
132607.0 Da
IEP (calculated)
6.091
GRAVY (calculated)
-0.473
Length
1185 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSRWKENGSP LPLYPSGASN PSHLLPCKRP LQSPSPCPPP RRPLVDITSN ALEQRGGYGY TTPLAKPSRP CGLLHDDEDD MNEAFLREVD AICEEHARST
0101: AKKEKEKKAA EEHKGTGEAP VAAAAGTIDA AGTEIATLDD AFWEEVSAIC EECDAQSAAK SQEGTKEEEE EEESLVLSCG DASLPPAISI TAEGVEFEDA
0201: FWKINAVSED HSTKAHAKYQ EGLKGMEEKD GLIALCGDPS VSPVISIAKG DGELVDALFG EVGASIHEGH ADISAAKVQE EQQDMELEKE EDEVCAPKKY
0301: YEYLHSLNDR QKEAACNDVA VPLMIVAGPG SGKTSTMVGR VLTLLKEGIP PSNILAMTFT TAAASEMRER IGTVVGKAVA KEIAISTFHS FCLQLCRTHA
0401: EKLGRTSEFI IYGHGQQRRA VIEAERLLEN DKNNGVGDTT KQYDADIKNS FKDKAKKWQK FITQAKASGR TPEDYEMKGD LTGASVLRHY NEILRSCNAL
0501: DYHDFINSSI TLLTNFPEVY KECQDMWRAI VVDEFQDTSA MQYCLLKILA SHNHITIVGD EDQSIFSFNG ADVSGFDSFR RDFPDYKEIR LSKNYRSTRA
0601: IVEAATALIQ NNSKRHHRKL VETDNPSGCK ITVKECHSED SQCAFVIDKI IETTSTTAEG CNFGNIAVLY RRQVTGKAFQ VSFRNRKIPF NVHGVAFYRK
0701: KVIKAIMAIL RTTLPGCDDG PWCQAFKALL PCDKEEKKKI IDHVEKISLA RECSFISAAT DIFSAKVSGT FKRSQITQGR KVLSTLDSLS KLVEREQSVS
0801: VIISSAGDML PQKYLLEKRA VVDIDNGKLL NEDSDIRSVL QFLMDDVSDF LSTHFSSSVE RSKTDEKGCA STLQAFIDYI SLRETENFRS RKEENKNSIT
0901: LTTIHQSKGL EWDVVFIVQA NDSEIPLLHE YNCTVKEAGS TLEEERRLLY VAMTRARKKL YILHVTVDSN RQLLQPSRFL REIPVHLLEV QGEETLRKMP
1001: EQPSGDIPFD DSEGNISIGK PIMGQNEVSP YPELAQGCLA NDFLRKFDID DRSVVSHIFH NWGKKQAFQN PKRLLEKISF VIDERLRGKG YKRKDVLRKL
1101: KLFLSGDEAL GYAQYVIKWE QIPIEKRSQL MRERQEHFQK QRIENSMGSS EPTAKQISYL RNLGCTITPT SRLHASNLIE KYKSL
0101: AKKEKEKKAA EEHKGTGEAP VAAAAGTIDA AGTEIATLDD AFWEEVSAIC EECDAQSAAK SQEGTKEEEE EEESLVLSCG DASLPPAISI TAEGVEFEDA
0201: FWKINAVSED HSTKAHAKYQ EGLKGMEEKD GLIALCGDPS VSPVISIAKG DGELVDALFG EVGASIHEGH ADISAAKVQE EQQDMELEKE EDEVCAPKKY
0301: YEYLHSLNDR QKEAACNDVA VPLMIVAGPG SGKTSTMVGR VLTLLKEGIP PSNILAMTFT TAAASEMRER IGTVVGKAVA KEIAISTFHS FCLQLCRTHA
0401: EKLGRTSEFI IYGHGQQRRA VIEAERLLEN DKNNGVGDTT KQYDADIKNS FKDKAKKWQK FITQAKASGR TPEDYEMKGD LTGASVLRHY NEILRSCNAL
0501: DYHDFINSSI TLLTNFPEVY KECQDMWRAI VVDEFQDTSA MQYCLLKILA SHNHITIVGD EDQSIFSFNG ADVSGFDSFR RDFPDYKEIR LSKNYRSTRA
0601: IVEAATALIQ NNSKRHHRKL VETDNPSGCK ITVKECHSED SQCAFVIDKI IETTSTTAEG CNFGNIAVLY RRQVTGKAFQ VSFRNRKIPF NVHGVAFYRK
0701: KVIKAIMAIL RTTLPGCDDG PWCQAFKALL PCDKEEKKKI IDHVEKISLA RECSFISAAT DIFSAKVSGT FKRSQITQGR KVLSTLDSLS KLVEREQSVS
0801: VIISSAGDML PQKYLLEKRA VVDIDNGKLL NEDSDIRSVL QFLMDDVSDF LSTHFSSSVE RSKTDEKGCA STLQAFIDYI SLRETENFRS RKEENKNSIT
0901: LTTIHQSKGL EWDVVFIVQA NDSEIPLLHE YNCTVKEAGS TLEEERRLLY VAMTRARKKL YILHVTVDSN RQLLQPSRFL REIPVHLLEV QGEETLRKMP
1001: EQPSGDIPFD DSEGNISIGK PIMGQNEVSP YPELAQGCLA NDFLRKFDID DRSVVSHIFH NWGKKQAFQN PKRLLEKISF VIDERLRGKG YKRKDVLRKL
1101: KLFLSGDEAL GYAQYVIKWE QIPIEKRSQL MRERQEHFQK QRIENSMGSS EPTAKQISYL RNLGCTITPT SRLHASNLIE KYKSL
0001: MENLPPNRGM WNQEYSHGRI SQSFRSAKPL LDRKRPIENA PNSSNPLPQR MKESMDTESV SHNINFNSTP LMELSANTPY KRLKPEIESY ADGHPCGLRT
0101: PPPRFDLDKE IINGFQTDIY ADVGSLSEAF VTPLKEPERV TLSNGCSTSS ILDDDFDDSI LEEIDLICEQ SARKAACQTP TTSIYQTPSK DNKSSDPKAS
0201: LDFRDVEKFE PDSNVKLKLD EETPTIAADP ALLNSMPDEC SKYMLSLNDR QRDAACSNIS TPLMVIAGPG SGKTSTMVGR VLVLLNEGLL PSNILAMTFT
0301: KAATSEMRER IGKSAGKKAA KDITISTFHS FSLQLCRMHA DKLQRTSEFS VYGHGQQRRA IIEAVRLYEE EKKNGSKTSV PCESGEGLNG AGAGAVCPEY
0401: AKDLSKKWQK FVTQGKASGK SPEQCRKMGN EIGAKILGNY NDILKACDAL DYHDLISCSV TLLSDFPEVF KECQDTWKAI IVDEFQDTST MQYKLLRMLG
0501: SHNHITIVGD DDQSIFGFNG ADSSGFDSFR RDFPNYKEVR LIKNYRSSRH IVEAASSIIK NNTKRCQSKS ISSENSQGSK ITVKECHNEE AQCAYVIDKI
0601: IEITNDGSTP CCSHGDIAIL YRRQVSGKVF QNAFRQRKIP FNVHGVAFYR KKVVQVILAM LKTTFSECDD ASYRRVFKAL LPFEKEEKKR IIEHIEKIST
0701: SRKCSFISAA SDIFNAKISG TFKRSQLTQG RKVLQTLDMV AKLVDREQSL SAVVTCVANM IPQKYLLEQR AVVDNDGGKL LNEDNDLRSV LQYLMDDVAE
0801: FISTHCTTTE EEDAIKEKKG CNQLHSFINY ISERETENFR SRRRDNENSV TLTTIHQSKG LEWDIVFIVK ANENEIPLLH ESNGNASESG TSLEEERRLL
0901: YVAMTRARKK LFFLYVTVDS NWQVLQPSRF LKEIPGHLLQ GDMSVNDCRK VHENLPNKTE QSVSSFGTDI KHEESKLTDN DVMNIPEDYA SEESIAAYAL
1001: NGNNFLKRFD VEVRSVVSHL FHNWAKKQAF QEPKRLIDKV RFVIGERLAI KKNKHKDVLR ALKSSLTSEE AFQYAEHVLR WEQLPADTRA HIVREKQEHF
1101: QKLRIENSMG TSEATSKQIA FLHSLGCTVV PTSRLHASRL IEQYKSL
0101: PPPRFDLDKE IINGFQTDIY ADVGSLSEAF VTPLKEPERV TLSNGCSTSS ILDDDFDDSI LEEIDLICEQ SARKAACQTP TTSIYQTPSK DNKSSDPKAS
0201: LDFRDVEKFE PDSNVKLKLD EETPTIAADP ALLNSMPDEC SKYMLSLNDR QRDAACSNIS TPLMVIAGPG SGKTSTMVGR VLVLLNEGLL PSNILAMTFT
0301: KAATSEMRER IGKSAGKKAA KDITISTFHS FSLQLCRMHA DKLQRTSEFS VYGHGQQRRA IIEAVRLYEE EKKNGSKTSV PCESGEGLNG AGAGAVCPEY
0401: AKDLSKKWQK FVTQGKASGK SPEQCRKMGN EIGAKILGNY NDILKACDAL DYHDLISCSV TLLSDFPEVF KECQDTWKAI IVDEFQDTST MQYKLLRMLG
0501: SHNHITIVGD DDQSIFGFNG ADSSGFDSFR RDFPNYKEVR LIKNYRSSRH IVEAASSIIK NNTKRCQSKS ISSENSQGSK ITVKECHNEE AQCAYVIDKI
0601: IEITNDGSTP CCSHGDIAIL YRRQVSGKVF QNAFRQRKIP FNVHGVAFYR KKVVQVILAM LKTTFSECDD ASYRRVFKAL LPFEKEEKKR IIEHIEKIST
0701: SRKCSFISAA SDIFNAKISG TFKRSQLTQG RKVLQTLDMV AKLVDREQSL SAVVTCVANM IPQKYLLEQR AVVDNDGGKL LNEDNDLRSV LQYLMDDVAE
0801: FISTHCTTTE EEDAIKEKKG CNQLHSFINY ISERETENFR SRRRDNENSV TLTTIHQSKG LEWDIVFIVK ANENEIPLLH ESNGNASESG TSLEEERRLL
0901: YVAMTRARKK LFFLYVTVDS NWQVLQPSRF LKEIPGHLLQ GDMSVNDCRK VHENLPNKTE QSVSSFGTDI KHEESKLTDN DVMNIPEDYA SEESIAAYAL
1001: NGNNFLKRFD VEVRSVVSHL FHNWAKKQAF QEPKRLIDKV RFVIGERLAI KKNKHKDVLR ALKSSLTSEE AFQYAEHVLR WEQLPADTRA HIVREKQEHF
1101: QKLRIENSMG TSEATSKQIA FLHSLGCTVV PTSRLHASRL IEQYKSL
Arabidopsis Description
SRS2ATP-dependent DNA helicase SRS2-like protein At4g25120 [Source:UniProtKB/Swiss-Prot;Acc:D1KF50]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.