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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • plastid 2
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:cytosol, plastid, secretory
BaCelLo:secretory
ChloroP:plastid
EpiLoc:extracellular
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:cytosol
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d022458_P001 Maize extracellular 74.21 87.41
Os07t0676900-01 Rice extracellular 77.99 77.99
TraesCS2B01G125900.1 Wheat extracellular 75.16 74.45
TraesCS2D01G108600.1 Wheat extracellular 74.84 74.14
TraesCS2A01G108700.1 Wheat extracellular 74.84 74.14
TraesCS2B01G126300.1 Wheat extracellular 74.84 74.14
TraesCS2B01G124900.1 Wheat extracellular 73.9 73.67
TraesCS2D01G107500.1 Wheat extracellular 72.64 73.33
TraesCS2A01G108400.1 Wheat cytosol 49.06 70.91
TraesCS2B01G124500.1 Wheat cytosol 48.43 70.0
TraesCS2A01G107300.1 Wheat extracellular 73.58 69.85
OQU90468 Sorghum extracellular 69.5 69.28
KXG36940 Sorghum extracellular, vacuole 68.55 67.7
EER97731 Sorghum extracellular 64.15 65.18
EER97460 Sorghum extracellular, mitochondrion, plastid 66.35 64.92
KXG39419 Sorghum extracellular, plastid 67.3 64.85
VIT_08s0058g00980.t01 Wine grape extracellular 53.46 64.64
VIT_08s0058g00970.t01 Wine grape extracellular 53.14 64.26
VIT_06s0004g07740.t01 Wine grape cytosol, extracellular, nucleus 52.2 63.12
KRH00400 Soybean extracellular 63.21 62.42
PGSC0003DMT400068341 Potato extracellular 61.95 62.34
GSMUA_Achr7P22220_001 Banana extracellular 56.29 61.94
KRH40790 Soybean extracellular 62.58 61.8
KRH00399 Soybean extracellular 61.32 61.71
VIT_18s0001g06890.t01 Wine grape extracellular 50.94 61.6
EES09122 Sorghum extracellular 61.32 61.51
VIT_18s0001g06840.t01 Wine grape extracellular 61.01 61.01
EER94654 Sorghum cytosol, endoplasmic reticulum, vacuole 65.72 60.76
KXG29896 Sorghum extracellular 61.95 60.43
EES09121 Sorghum extracellular 62.26 60.37
VIT_18s0001g06850.t01 Wine grape extracellular 60.06 60.25
KXG22808 Sorghum extracellular 60.06 59.69
Solyc05g050880.2.1 Tomato extracellular 59.43 59.62
EES06568 Sorghum extracellular 60.06 59.5
KRH65489 Soybean extracellular 61.64 59.39
PGSC0003DMT400018003 Potato extracellular 50.94 59.34
OQU82465 Sorghum extracellular 59.75 59.19
KRG98181 Soybean extracellular 59.43 59.06
Solyc09g018590.1.1 Tomato extracellular 46.23 58.8
KRH72788 Soybean endoplasmic reticulum, vacuole 58.8 58.44
KRH30142 Soybean extracellular 58.8 58.44
Solyc06g082420.2.1 Tomato extracellular 57.23 58.33
EER88495 Sorghum extracellular 57.23 57.96
KRH17142 Soybean extracellular, vacuole 57.55 57.37
KRH40791 Soybean endoplasmic reticulum, extracellular, plastid 61.64 57.31
EES15541 Sorghum extracellular 58.8 57.01
PGSC0003DMT400078121 Potato extracellular 55.66 56.73
EER88496 Sorghum extracellular 55.03 55.91
KRG92979 Soybean extracellular 58.49 55.86
KXG29898 Sorghum extracellular 57.23 55.83
EES09120 Sorghum plastid 59.43 55.59
EES04822 Sorghum extracellular 56.6 55.38
EER89897 Sorghum extracellular 56.29 54.41
OQU76535 Sorghum extracellular 53.46 53.46
EER89901 Sorghum extracellular 54.09 52.92
KRH65488 Soybean extracellular 54.09 52.76
KXG29892 Sorghum extracellular 53.14 52.65
EER99906 Sorghum extracellular 51.89 50.93
OQU92637 Sorghum extracellular 55.66 47.2
OQU84691 Sorghum extracellular 49.06 46.43
EES00088 Sorghum plastid 52.52 41.13
Protein Annotations
KEGG:00940+1.11.1.7Gene3D:1.10.420.10Gene3D:1.10.520.10MapMan:35.1EntrezGene:8078551UniProt:C5X5K3
EnsemblPlants:EER97728ProteinID:EER97728ProteinID:EER97728.1GO:GO:0003674GO:GO:0003824GO:GO:0004601
GO:GO:0005488GO:GO:0005575GO:GO:0005576GO:GO:0006950GO:GO:0006979GO:GO:0008150
GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016491GO:GO:0020037GO:GO:0042744
GO:GO:0046872GO:GO:0055114GO:GO:0098869InterPro:Haem_peroxidaseInterPro:Haem_peroxidase_pln/fun/bacInterPro:IPR002016
PFAM:PF00141PRINTS:PR00458PRINTS:PR00461ScanProsite:PS00435ScanProsite:PS00436PFscan:PS50873
PANTHER:PTHR31388PANTHER:PTHR31388:SF48MetaCyc:PWY-5461MetaCyc:PWY-5466MetaCyc:PWY-5469MetaCyc:PWY-6824
MetaCyc:PWY-7214MetaCyc:PWY-7445InterPro:Peroxidase_plnInterPro:Peroxidases_ASInterPro:Peroxidases_heam-ligand_BSEnsemblPlantsGene:SORBI_3002G416500
SUPFAM:SSF48113unigene:Sbi.9250InterPro:Secretory_peroxidaseSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0001A835D6
RefSeq:XP_002461207.1SEG:seg::::
Description
hypothetical protein
Coordinates
chr2:+:76386127..76388800
Molecular Weight (calculated)
33199.6 Da
IEP (calculated)
8.820
GRAVY (calculated)
0.153
Length
318 amino acids
Sequence
(BLAST)
001: MAAASSLSVL VLLCLAAVAS AQLSATFYSR SCPRALATIK SAVTAAVAQE PRMGASLLRL HFHDCFVQGC DASVLLNDTA TFTGEQTANP NVGSIRGFGV
101: VDNIKAQVEA VCPGVVSCAD ILAVAARDSV VALGGPSWRV LLGRRDSTTA SLALANSDLP APSLDLANLT AAFAKKRLSR TDLVALSGAH TIGLSQCKNF
201: RAHIYNDTNV NVAFATLRKV SCPAAAGDGD GNLTPLDTAT STAFDNAYYT NLLSRSGLLH SDQQLFNGGG ATDGLVRTYA STPTRFNRDF TAAMIRMGNI
301: SPLTGRQGQI RRACSRVN
Best Arabidopsis Sequence Match ( AT5G05340.1 )
(BLAST)
001: MASNKLISIL VLVVTLLLQG DNNYVVEAQL TTNFYSTSCP NLLSTVQTAV KSAVNSEARM GASILRLFFH DCFVNGCDGS ILLDDTSSFT GEQNAAPNRN
101: SARGFNVIDN IKSAVEKACP GVVSCADILA IAARDSVVAL GGPNWNVKVG RRDARTASQA AANSNIPAPT SSLSQLISSF SAVGLSTRDM VALSGAHTIG
201: QSRCTNFRAR IYNETNINAA FATTRQRTCP RASGSGDGNL APLDVTTAAS FDNNYFKNLM TQRGLLHSDQ VLFNGGSTDS IVRGYSNNPS SFNSDFTAAM
301: IKMGDISPLT GSSGEIRKVC GRTN
Arabidopsis Description
PER52Peroxidase 52 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLC0]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.