CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plasma membrane 1
extracellular 1
endoplasmic reticulum 1
golgi 1
vacuole 1
nucleus 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d006369_P002	Maize	nucleus	90.86	90.86
Os01t0772150-00	Rice	nucleus	80.83	81.07
HORVU3Hr1G075380.1	Barley	nucleus	73.75	75.53
TraesCS3D01G307900.1	Wheat	nucleus	73.75	75.3
TraesCS3B01G342100.1	Wheat	nucleus	73.75	75.3
TraesCS3A01G295200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	73.45	75.0
GSMUA_Achr8P20300_001	Banana	plasma membrane	58.7	61.61
VIT_08s0056g01660.t01	Wine grape	nucleus	55.16	58.62
CDY50660	Canola	nucleus	50.15	50.6
CDY51752	Canola	nucleus	49.56	50.0
KRG91550	Soybean	nucleus	50.15	49.28
Bra031976.1-P	Field mustard	nucleus	50.15	49.28
PGSC0003DMT400046255	Potato	cytosol	46.31	47.87
AT3G03750.2	Thale cress	nucleus	48.67	46.61
Solyc01g068370.2.1	Tomato	nucleus	46.02	45.75
OQU80399	Sorghum	nucleus	23.6	14.04
EES19725	Sorghum	nucleus	27.14	13.65
OQU85329	Sorghum	nucleus	25.96	12.98
EES01635	Sorghum	nucleus	25.96	11.86
EES05802	Sorghum	nucleus	27.43	11.82
OQU88147	Sorghum	nucleus	24.19	11.82
EES15150	Sorghum	nucleus	25.66	11.77
OQU78645	Sorghum	nucleus	25.66	11.66
EES14036	Sorghum	nucleus	21.83	11.11
EES13161	Sorghum	nucleus	25.07	10.79
OQU77925	Sorghum	nucleus	23.89	10.74
EER96294	Sorghum	nucleus	22.42	10.7
EER96081	Sorghum	nucleus	25.66	10.48
EES10399	Sorghum	nucleus	24.78	10.26
EES12588	Sorghum	nucleus	26.55	10.1
EES13797	Sorghum	nucleus	25.66	7.69
EER96634	Sorghum	nucleus	25.96	7.06
EES13798	Sorghum	nucleus	25.66	6.9
KXG30908	Sorghum	nucleus	23.01	4.9
Os04t0692900-01	Rice	nucleus	5.01	3.85
OQU80395	Sorghum	nucleus	1.47	0.84

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.7	Gene3D:2.170.270.10	EntrezGene:8079274	UniProt:C5XLJ3	EnsemblPlants:EES01534
ProteinID:EES01534	ProteinID:EES01534.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005694	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008270	GO:GO:0009987	GO:GO:0016043
GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0032259	GO:GO:0034968	InterPro:IPR001214
InterPro:IPR003616	InterPro:IPR007728	PFAM:PF00856	PFAM:PF05033	PFscan:PS50280	PFscan:PS50868
PANTHER:PTHR44253	InterPro:Post-SET_dom	InterPro:Pre-SET_dom	InterPro:SET_dom	SMART:SM00317	EnsemblPlantsGene:SORBI_3003G311000
SUPFAM:SSF82199	UniParc:UPI0001A84333	RefSeq:XP_002456414.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr3:+:63924537..63927547

Molecular Weight (calculated)

35638.5 Da

IEP (calculated)

8.040

GRAVY (calculated)

-0.073

Length

339 amino acids

Sequence
(BLAST)

001: MRNPAAPGAV TESAELVLPL LPPQDLAAVA SACRALRAAV TGVTARRAAD AARGLEPLPI PFRNCVDSKP YAYFLYTPFS LTRLAPGASA PSAQPWGAAW
101: VRPPGPTWPR PNLDGFPSSV CGCACAAAEC GGTQCACSDA DADAAGPGFE AGMGSLRECG DGCACAPSCR NRRTQRGVAV RLRVVRHLHK GWGLHAAEAL
201: GRGQFVCEYA GEFLTTEEAR RRQKLYDELA SGGNLSPALI VIREHLPSGK ACLRVNIDAT KVGNVARFIN HSCDGGNLHP VLVRSSGSLL PRLCFFASRD
301: IVEGEELTFS YGDARVRPKG LPCFCGSSGC SGVLPSEET

Best Arabidopsis Sequence Match ( AT3G03750.2 )
(BLAST)

001: MQRLRESPPP KTRCLGEASD IIPAADRFLR CANLILPWLN PRELAVVAQT CKTLSLISKS LTIHRSLDAA RSLENISIPF HNSIDSQRYA YFIYTPFQIP
101: ASSPPPPRQW WGAAANECGS ESRPCFDSVS ESGRFGVSLV DESGCECERC EEGYCKCLAF AGMEEIANEC GSGCGCGSDC SNRVTQKGVS VSLKIVRDEK
201: KGWCLYADQL IKQGQFICEY AGELLTTDEA RRRQNIYDKL RSTQSFASAL LVVREHLPSG QACLRINIDA TRIGNVARFI NHSCDGGNLS TVLLRSSGAL
301: LPRLCFFAAK DIIAEEELSF SYGDVSVAGE NRDDKLNCSC GSSCCLGTLP CENT

Arabidopsis Description

SUVR3Histone-lysine N-methyltransferase SUVR3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRV2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.