CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G520700.1	Wheat	nucleus	25.92	70.83
TraesCS3B01G590300.1	Wheat	nucleus	47.01	58.92
Bra005362.1-P	Field mustard	nucleus	22.62	43.52
EES12588	Sorghum	nucleus	49.05	43.32
VIT_16s0013g00310.t01	Wine grape	nucleus	24.65	41.99
PGSC0003DMT400054167	Potato	nucleus	23.51	38.38
OQU80399	Sorghum	nucleus	27.57	38.07
VIT_16s0013g00650.t01	Wine grape	nucleus	27.19	36.77
Solyc03g093720.1.1	Tomato	nucleus	13.98	36.67
Solyc03g093740.1.1	Tomato	nucleus	13.98	35.83
PGSC0003DMT400080404	Potato	nucleus, plastid	26.05	33.55
VIT_00s0309g00020.t01	Wine grape	nucleus	30.75	33.38
KRG90121	Soybean	nucleus	23.0	32.79
CDX89510	Canola	nucleus	30.37	31.53
CDY25627	Canola	nucleus	29.73	31.37
CDY31670	Canola	nucleus	27.95	30.68
CDX84255	Canola	nucleus	27.57	30.1
AT2G22740.1	Thale cress	nucleus	29.73	29.62
PGSC0003DMT400080391	Potato	nucleus	16.77	29.4
Bra030212.1-P	Field mustard	nucleus	28.97	28.79
AT2G35160.3	Thale cress	nucleus	28.84	28.59
Solyc03g093710.1.1	Tomato	nucleus	29.22	27.45
EES01534	Sorghum	nucleus	11.82	27.43
Solyc03g093760.1.1	Tomato	nucleus	27.06	26.73
PGSC0003DMT400092528	Potato	cytosol	7.24	26.64
PGSC0003DMT400054163	Potato	extracellular, nucleus	27.83	26.07
PGSC0003DMT400054154	Potato	nucleus	27.57	25.59
OQU88147	Sorghum	nucleus	22.49	25.5
OQU77925	Sorghum	nucleus	24.14	25.2
Solyc03g093700.1.1	Tomato	nucleus	26.68	25.03
Solyc03g093770.1.1	Tomato	golgi, plasma membrane	12.83	24.94
PGSC0003DMT400080398	Potato	nucleus	27.32	24.43
EES19725	Sorghum	nucleus	20.71	24.18
PGSC0003DMT400068351	Potato	nucleus	32.66	24.15
Solyc06g060960.1.1	Tomato	nucleus	32.15	23.98
KRH77297	Soybean	nucleus	32.53	23.68
Solyc08g077940.1.1	Tomato	nucleus	30.24	22.95
KRH28192	Soybean	nucleus	31.89	22.69
EES14036	Sorghum	nucleus	19.19	22.67
PGSC0003DMT400067504	Potato	nucleus	30.11	22.44
EER96294	Sorghum	nucleus	20.2	22.39
OQU78645	Sorghum	nucleus	21.09	22.25
EES01635	Sorghum	nucleus	20.46	21.7
EER96081	Sorghum	nucleus	21.35	20.24
EER96634	Sorghum	nucleus	31.51	19.9
EES13797	Sorghum	nucleus	28.46	19.81
KRH77260	Soybean	nucleus	12.07	19.51
EES10399	Sorghum	nucleus	20.2	19.41
EES13798	Sorghum	nucleus	29.35	18.33
KRH28232	Soybean	nucleus	11.05	17.79
OQU85329	Sorghum	nucleus	14.23	16.52
EES15150	Sorghum	nucleus	14.49	15.43
EES13161	Sorghum	nucleus	14.74	14.72
OQU80395	Sorghum	nucleus	9.91	13.15
KXG30908	Sorghum	nucleus	15.12	7.47

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.7	Gene3D:2.170.270.10	Gene3D:2.30.280.10	EntrezGene:8076250	UniProt:C5XS18
EnsemblPlants:EES05802	ProteinID:EES05802	ProteinID:EES05802.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005694
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008270	GO:GO:0009987
GO:GO:0016043	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0032259	GO:GO:0034968
GO:GO:0042393	InterPro:IPR001214	InterPro:IPR003105	InterPro:IPR003616	InterPro:IPR007728	InterPro:IPR036987
PFAM:PF00856	PFAM:PF02182	PFAM:PF05033	PFscan:PS50280	PFscan:PS50867	PFscan:PS50868
PFscan:PS51015	PANTHER:PTHR22884	PANTHER:PTHR22884:SF388	InterPro:PUA-like_sf	InterPro:Post-SET_dom	InterPro:Pre-SET_dom
InterPro:SET_dom	SMART:SM00317	SMART:SM00466	SMART:SM00468	EnsemblPlantsGene:SORBI_3004G298600	InterPro:SRA-YDG_sf
InterPro:SRA_YDG	SUPFAM:SSF82199	SUPFAM:SSF88697	UniParc:UPI0001A85FD9	RefSeq:XP_002452826.1	SEG:seg

Description

hypothetical protein

Coordinates

chr4:+:63792118..63795183

Molecular Weight (calculated)

86025.2 Da

IEP (calculated)

5.838

GRAVY (calculated)

-0.464

Length

787 amino acids

Sequence
(BLAST)

001: MEGGGGGGGG APVSPTAGGA RRHKVLAPWR FQIGFVRREM NAGVVSDGKQ GALETPQMSC QTATSDVPSV SLNDGGGVDG ESPAADGENE VPNNRGAGAV
101: DGANRGLGGV DGNPAAKEGD SLPKDGEFLV DLENDGVTAD PHGMAKPSDL PGFQNNGPTE EINLAVNNSE GFVTSEGTVP GCRKGRKTVV PWRFQIGHQP
201: KWSQNLFSGN RSNGKAEDPT SKVGDRSRKD APAMARNHSC LKGSATSGQS SVRIPKGTGS APKKRKVDKD DQYEATVNNR ISVVRENVLT TLRAFRIIYE
301: KLLEEEQIKW RERGHGLSPD LAAFNIFRKR FCANYDDLKY DGSIPGVRIG DVFNSVMELY IVGIHRAQSL PVDHIKKKDG TCLAVSVVSY AQPSVFDSLD
401: FLLHVGSVTD TCDQEMEGTD LALKESMDTD TPVRVIHAVV TDLGDDCQPK QLTSYVYGGL YLVEKFNREK TSGSQYVSIF HLRRMTGQKH IDLQVLKTKM
501: PESFAGTFII DISGGLEKVP ISAINSISNE YLTTFHYISQ IQYPLKYRPD PPSGCDCVGG CSVSQKCACA VKNGGGFHFN DIGGLTEGKP LIYECGPSCK
601: CPPTCRNRVS QHGIKFRLQV FKTKSMGWGV RTLDFIPDGS FVCEYVGELL TDEEAQERKN DEYLFAIGNS YYDAPHWEAE IKAIPSLQNG PIEDDETVFA
701: VDALNQGNFA RFINHCCTPN LFPQNVLHDH DNISMPHIMF FASEDIPPLK ELSYDYNYQI DKVYDSDGNI KMKYCFCGSN ECNGRLY

Best Arabidopsis Sequence Match ( AT2G35160.1 )
(BLAST)

001: MVHSESSILS SLRGGDGGGI PCSKDELAIN GSYTDPMGRR KSKRFKVAAE SEFSPDFGSI TRQLRSRRMQ KEFTVETYET RNVSDVCVLS SQADVELIPG
101: EIVAERDSFK SVDCNDMSVG LTEGAESLGV NMQEPMKDRN MPENTSEQNM VEVHPPSISL PEEDMMGSVC RKSITGTKEL HGRTISVGRD LSPNMGSKFS
201: KNGKTAKRSI SVEEENLVLE KSDSGDHLGP SPEVLELEKS EVWIITDKGV VMPSPVKPSE KRNGDYGEGS MRKNSERVAL DKKRLASKFR LSNGGLPSCS
301: SSGDSARYKV KETMRLFHET CKKIMQEEEA RPRKRDGGNF KVVCEASKIL KSKGKNLYSG TQIIGTVPGV EVGDEFQYRM ELNLLGIHRP SQSGIDYMKD
401: DGGELVATSI VSSGGYNDVL DNSDVLIYTG QGGNVGKKKN NEPPKDQQLV TGNLALKNSI NKKNPVRVIR GIKNTTLQSS VVAKNYVYDG LYLVEEYWEE
501: TGSHGKLVFK FKLRRIPGQP ELPWKEVAKS KKSEFRDGLC NVDITEGKET LPICAVNNLD DEKPPPFIYT AKMIYPDWCR PIPPKSCGCT NGCSKSKNCA
601: CIVKNGGKIP YYDGAIVEIK PLVYECGPHC KCPPSCNMRV SQHGIKIKLE IFKTESRGWG VRSLESIPIG SFICEYAGEL LEDKQAESLT GKDEYLFDLG
701: DEDDPFTINA AQKGNIGRFI NHSCSPNLYA QDVLYDHEEI RIPHIMFFAL DNIPPLQELS YDYNYKIDQV YDSNGNIKKK FCYCGSAECS GRLY

Arabidopsis Description

SUVH5Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 [Source:UniProtKB/Swiss-Prot;Acc:O82175]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.