CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os04t0544100-01	Rice	nucleus	64.53	68.37
TraesCS2D01G389100.1	Wheat	nucleus	59.71	55.42
TraesCS2B01G409600.1	Wheat	nucleus	59.37	54.99
TraesCS2A01G389600.1	Wheat	mitochondrion, nucleus	59.93	52.98
EES05802	Sorghum	nucleus	43.32	49.05
Bra005362.1-P	Field mustard	nucleus	20.99	45.72
VIT_16s0013g00310.t01	Wine grape	nucleus	22.78	43.94
PGSC0003DMT400054167	Potato	nucleus	22.45	41.49
OQU80399	Sorghum	nucleus	25.59	40.0
Solyc03g093740.1.1	Tomato	nucleus	13.47	39.09
VIT_16s0013g00650.t01	Wine grape	nucleus	24.58	37.63
VIT_00s0309g00020.t01	Wine grape	nucleus	30.3	37.24
Solyc03g093720.1.1	Tomato	nucleus	12.46	37.0
PGSC0003DMT400080404	Potato	nucleus, plastid	24.69	36.01
CDX89510	Canola	nucleus	28.96	34.04
CDY25627	Canola	nucleus	28.28	33.78
KRG90121	Soybean	nucleus	20.31	32.79
CDY31670	Canola	nucleus	26.37	32.78
CDX84255	Canola	nucleus	26.04	32.18
Bra030212.1-P	Field mustard	nucleus	27.95	31.44
PGSC0003DMT400080391	Potato	nucleus	15.82	31.4
AT2G22740.1	Thale cress	nucleus	27.61	31.14
AT2G35160.3	Thale cress	nucleus	27.39	30.73
PGSC0003DMT400092528	Potato	cytosol	6.96	28.97
Solyc03g093760.1.1	Tomato	nucleus	25.14	28.11
Solyc03g093710.1.1	Tomato	nucleus	26.26	27.92
PGSC0003DMT400054154	Potato	nucleus	26.37	27.71
EES19725	Sorghum	nucleus	20.2	26.71
Solyc03g093770.1.1	Tomato	golgi, plasma membrane	12.12	26.67
EES01534	Sorghum	nucleus	10.1	26.55
PGSC0003DMT400054163	Potato	extracellular, nucleus	25.03	26.55
Solyc03g093700.1.1	Tomato	nucleus	24.92	26.46
Solyc06g060960.1.1	Tomato	nucleus	31.31	26.45
PGSC0003DMT400068351	Potato	nucleus	31.54	26.41
OQU88147	Sorghum	nucleus	20.54	26.37
KRH77297	Soybean	nucleus	31.76	26.18
PGSC0003DMT400080398	Potato	nucleus	25.36	25.68
KRH28192	Soybean	nucleus	31.65	25.5
Solyc08g077940.1.1	Tomato	nucleus	29.07	24.98
EES14036	Sorghum	nucleus	18.52	24.77
OQU77925	Sorghum	nucleus	20.88	24.67
OQU78645	Sorghum	nucleus	20.65	24.66
EES01635	Sorghum	nucleus	20.54	24.66
PGSC0003DMT400067504	Potato	nucleus	28.96	24.43
EER96294	Sorghum	nucleus	19.08	23.94
EER96081	Sorghum	nucleus	20.31	21.81
EER96634	Sorghum	nucleus	30.19	21.59
EES10399	Sorghum	nucleus	19.64	21.37
KRH77260	Soybean	nucleus	11.67	21.36
EES13797	Sorghum	nucleus	27.05	21.31
EES13798	Sorghum	nucleus	28.62	20.24
KRH28232	Soybean	nucleus	10.89	19.84
OQU85329	Sorghum	nucleus	12.68	16.67
OQU80395	Sorghum	nucleus	10.44	15.68
EES15150	Sorghum	nucleus	12.12	14.61
EES13161	Sorghum	nucleus	11.9	13.45
KXG30908	Sorghum	nucleus	13.58	7.6

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.7	Gene3D:2.170.270.10	Gene3D:2.30.280.10	EntrezGene:8055936	UniProt:C5YD31
EnsemblPlants:EES12588	ProteinID:EES12588	ProteinID:EES12588.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005694
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008270	GO:GO:0009987
GO:GO:0016043	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0032259	GO:GO:0034968
GO:GO:0042393	InterPro:IPR001214	InterPro:IPR003105	InterPro:IPR003616	InterPro:IPR007728	InterPro:IPR036987
PFAM:PF00856	PFAM:PF02182	PFAM:PF05033	PFscan:PS50280	PFscan:PS50867	PFscan:PS50868
PFscan:PS51015	PANTHER:PTHR22884	PANTHER:PTHR22884:SF388	InterPro:PUA-like_sf	InterPro:Post-SET_dom	InterPro:Pre-SET_dom
InterPro:SET_dom	SMART:SM00317	SMART:SM00466	SMART:SM00468	SMART:SM00508	EnsemblPlantsGene:SORBI_3006G165800
InterPro:SRA-YDG_sf	InterPro:SRA_YDG	SUPFAM:SSF82199	SUPFAM:SSF88697	UniParc:UPI0001A874DD	RefSeq:XP_002448260.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:52323626..52326718

Molecular Weight (calculated)

96888.6 Da

IEP (calculated)

7.817

GRAVY (calculated)

-0.603

Length

891 amino acids

Sequence
(BLAST)

001: MEMGAAAAKP APRADGVRRY KVLVPWRFQP GYVRQPLKHT ASANGAAPNG GGGNTAGVPD AKNCGSDGAP SAVGETNGFR DSKIFGSGGA PSPGKSGAVG
101: AGEEQSVRCT RGQSLKSPDV DNGGCPGPGN ACNLGKPVRG GRVKSSPLEG TGNSRGANDG VVAAAGEDCN LGSSNCDDSF KDARTQDFSG AGDGTACDPE
201: VIEITEKCFA KGLKKPSVDQ TGSKSNGSAS GLRSEDPEGN VGLGDSSYHA AKGCSMGDGA AKENNATAKG CSSATPGSNG NGTYVRKGRK TVVPWRFQAG
301: YKRSFSDAFG SNNLSPDRPA YGFDGSSTQC APATRSSVRC YASAHSGVRV SAMSNFSMKG ENGTGTECKK RKTNSDYQDE VMLDNGDPIV RESIMRSLQD
401: LRLIYRELLD EEEDNSREEV LNMRPDLRAY KIFRERFSTE FDDEKYIGSV PGIYPGDIFH LRVELCVVGL HRPHRVGIDC TKKDDGTTVA VSIVSCAQSS
501: DIKYNLDVLV YTGPVAVTVN QRIEGTNWAL KKSMDTNTPV RVIHGFTTQN GKKKFPTYIY GGLYLVEKYW REKEHGDRYV YMFRLRRMKG QKHIDIQEIL
601: QTGNSGSKNN VIIKDLSHGL ERVPVPVVNK ISDECPMPYR YTSHLQYPRN YRPTPPAGCG CVGGCSDTKR CACAVKNGGE IPFNDKGRIL EAKPLVYECG
701: PSCKCPPTCH NRVGQHGLKF RLQIFKTKSM GWGVRTLDFI PSGSFVCEYI GEVLEDEEAQ KRTNDEYLFA IGHNYYDESL WEGLSRSIPS LQKGPGKDDE
801: TGFAVDASEM GNFAKFINHS CTPNIYAQNV LYDHEDISVP HIMFFACDDI RPNQELFYHY NYKIDQVHDA NGNIKKKKCL CGSVECDGWL Y

Best Arabidopsis Sequence Match ( AT2G35160.4 )
(BLAST)

001: MVHSESSILS SLRGGDGGGI PCSKDELAIN GSYTDPMGRR KSKRFKVAAE SEFSPDFGSI TRQLRSRRMQ KEFTVETYET RNVSDVCVLS SQADVELIPG
101: EIVAERDSFK SVDCNDMSVG LTEGAESLGV NMQEPMKDRN MPENTSEQNM VEVHPPSISL PEEDMMGSVC RKSITGTKEL HGRTISVGRD LSPNMGSKFS
201: KNGKTAKRSI SVEEENLVLE KSDSGDHLGP SPEVLELEKS EVWIITDKGV VMPSPVKPSE KRNGDYGEGS MRKNSERVAL DKKRLASKFR LSNGGLPSCS
301: SSGDSARYKV KETMRLFHET CKKIMQEEEA RPRKRDGGNF KVVCEASKIL KSKGKNLYSG TQIIGTVPGV EVGDEFQYRM ELNLLGIHRP SQSGIDYMKD
401: DGGELVATSI VSSGGYNDVL DNSDVLIYTG QGGNVGKKKN NEPPKDQQLV TGNLALKNSI NKKNPVRVIR GIKNTTLQSS VVAKNYVYDG LYLVEEYWEE
501: TGSHGKLVFK FKLRRIPGQP ELPWKEVAKS KKSEFRDGLC NVDITEGKET LPICAVNNLD DEKPPPFIYT AKMIYPDWCR PIPPKSCGCT NGCSKSKNCA
601: CIVKNGGKIP YYDGAIVEIK PLVYECGPHC KCPPSCNMRV SQHGIKIKLE IFKTESRGWG VRSLESIPIG SFICEYAGEL LEDKQAESLT GKDEYLFDLG
701: DEDDPFTINA AQKGNIGRFI NHSCSPNLYA QDVLYDHEEI RIPHIMFFAL DNIPPLQELS YDYNYKIDQV YDSNGNIKKK FCYCGSAECS GRLY

Arabidopsis Description

SUVH5Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 [Source:UniProtKB/Swiss-Prot;Acc:O82175]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.