CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane, vacuole

Predictor Summary:

plasma membrane 7
extracellular 5
endoplasmic reticulum 6
golgi 5
vacuole 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d026436_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	70.97	75.49
Os04t0644400-01	Rice	nucleus	39.63	47.25
Solyc07g007860.1.1	Tomato	extracellular	27.19	42.75
OQU82307	Sorghum	extracellular, plasma membrane	28.11	41.22
PGSC0003DMT400079355	Potato	extracellular	25.35	40.15
KRH03647	Soybean	endoplasmic reticulum, extracellular, plasma membrane	34.1	38.95
TraesCS2B01G546700.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	50.23	38.93
KRH20158	Soybean	endoplasmic reticulum	39.17	37.44
TraesCS2D01G519700.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	49.77	37.37
TraesCS2A01G518100.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	49.31	36.64
PGSC0003DMT400007468	Potato	extracellular	38.25	34.44
Bra037196.1-P	Field mustard	endoplasmic reticulum, plasma membrane	37.33	31.89
Solyc12g009650.1.1	Tomato	nucleus	38.71	31.7
CDX81428	Canola	endoplasmic reticulum, plasma membrane	37.33	31.64
VIT_11s0016g05840.t01	Wine grape	endoplasmic reticulum, plasma membrane	36.87	30.08
CDY18576	Canola	endoplasmic reticulum, plasma membrane	36.41	28.21
AT2G10940.2	Thale cress	endoplasmic reticulum, plasma membrane	37.33	27.84
EER88705	Sorghum	extracellular	38.71	27.18
HORVU2Hr1G114680.2	Barley	endoplasmic reticulum	48.39	25.06
EER89284	Sorghum	endoplasmic reticulum, vacuole	34.1	22.84

Protein Annotations

Gene3D:1.10.110.10	MapMan:35.2	EntrezGene:8068474	InterPro:Bifun_inhib/LTP/seed_sf	UniProt:C5Y908	EnsemblPlants:EES12957
ProteinID:EES12957	ProteinID:EES12957.1	GO:GO:0005575	GO:GO:0005576	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0009506	GO:GO:0009507	GO:GO:0009535	GO:GO:0009536	GO:GO:0009579
GO:GO:0016020	GO:GO:0048046	InterPro:Hydrophob_seed	PFAM:PF14547	PANTHER:PTHR31731	PANTHER:PTHR31731:SF20
EnsemblPlantsGene:SORBI_3006G238000	SUPFAM:SSF47699	unigene:Sbi.4192	SignalP:SignalP-noTM	UniParc:UPI0001A873D3	RefSeq:XP_002448629.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:57910950..57911603

Molecular Weight (calculated)

21876.3 Da

IEP (calculated)

7.798

GRAVY (calculated)

0.419

Length

217 amino acids

Sequence
(BLAST)

001: MESTKLSALL VLAMLALSSS PLALAWEKAE PECHSCESGS PPSTGVPLPP ISIPSVPLPP VSIPSVPLPP VSIPSVPIPK LPVPPVTLPP VSGLPPVSLP
101: PIPIIGGSPT KKGHRKACPP PPSPPTPTPT PTPSSDKCPI DALKLGACVD VLGNEVHIGD ANVKCCPLVK GIAGLSAAAC LCTAIKAKVL DISVYVPIAL
201: EVLVNCGCAV PPGYKCT

Best Arabidopsis Sequence Match ( AT2G10940.2 )
(BLAST)

001: MDSSKLSSLS LCLFLICIIY LPQHSLACGS CNPRKGGKHS PKAPKLPVPP VTVPKLPVPP VTVPKLPVPP VTVPKLPVPP VTIPKLPVPP VTVPKLPVPP
101: VTVPKLPVPP VTVPKLPVPP VTVPKLPVPP VTVPKLPVPP VTVPKLPLPP ISGLPIPPVV GPNLPLPPLP IVGPILPPGT TPPATGGKDC PPPPGSVKPP
201: SGGGKATCPI DTLKLGACVD LLGGLVKIGL GDPAVNKCCP LLKGLVEVEA AACLCTTLKL KALDLNLYVP VALQLLLTCG KNPPPGYTCS I

Arabidopsis Description

At2g10940/F15K19.1 [Source:UniProtKB/TrEMBL;Acc:Q9SKI0]
SUBAcon: [endoplasmic reticulum,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.