CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d032343_P001	Maize	plastid	77.1	78.84
OQU80399	Sorghum	nucleus	27.06	53.68
EES13798	Sorghum	nucleus	53.23	47.78
TraesCS1A01G117300.1	Wheat	nucleus	36.87	44.03
Os08t0400200-00	Rice	nucleus	44.92	43.31
TraesCS1D01G118300.1	Wheat	nucleus, plastid	43.68	40.36
TraesCS1B01G137100.1	Wheat	nucleus, plastid	44.39	37.8
HORVU1Hr1G025960.1	Barley	nucleus, plastid	43.68	35.69
Os08t0400000-01	Rice	mitochondrion	28.82	35.17
Os08t0399300-00	Rice	nucleus	25.38	32.91
OQU80395	Sorghum	nucleus	17.15	32.72
EER96634	Sorghum	nucleus	35.72	32.42
OQU88147	Sorghum	nucleus	17.68	28.82
EES19725	Sorghum	nucleus	16.98	28.49
EES05802	Sorghum	nucleus	19.81	28.46
EES12588	Sorghum	nucleus	21.31	27.05
EES01635	Sorghum	nucleus	17.59	26.82
OQU77925	Sorghum	nucleus	17.86	26.79
EES14036	Sorghum	nucleus	15.56	26.43
EER96294	Sorghum	nucleus	16.53	26.34
EES01534	Sorghum	nucleus	7.69	25.66
OQU78645	Sorghum	nucleus	16.36	24.8
EER96081	Sorghum	nucleus	17.77	24.22
EES10399	Sorghum	nucleus	16.8	23.2
OQU85329	Sorghum	nucleus	9.2	15.34
EES15150	Sorghum	nucleus	9.99	15.29
EES13161	Sorghum	nucleus	9.55	13.71
KXG30908	Sorghum	nucleus	11.32	8.04

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.7	Gene3D:2.170.270.10	Gene3D:2.30.280.10	UniProt:C5YKQ4	EnsemblPlants:EES13797
ProteinID:EES13797	ProteinID:EES13797.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005694	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009987	GO:GO:0016043	GO:GO:0016571
GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0034968	GO:GO:0042393	InterPro:Hist-Lys_N-MeTrfase_plant
InterPro:IPR001214	InterPro:IPR003105	InterPro:IPR007728	InterPro:IPR025794	InterPro:IPR036987	PFAM:PF00856
PFAM:PF02182	PFAM:PF05033	PFscan:PS50280	PFscan:PS50867	PFscan:PS51015	PFscan:PS51575
PANTHER:PTHR22884	PANTHER:PTHR22884:SF471	InterPro:PUA-like_sf	InterPro:Pre-SET_dom	InterPro:SET_dom	SMART:SM00317
SMART:SM00466	SMART:SM00468	EnsemblPlantsGene:SORBI_3007G121400	InterPro:SRA-YDG_sf	InterPro:SRA_YDG	SUPFAM:SSF82199
SUPFAM:SSF88697	UniParc:UPI0001A87F13	RefSeq:XP_002444302.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr7:+:52255730..52259125

Molecular Weight (calculated)

122759.0 Da

IEP (calculated)

10.340

GRAVY (calculated)

-0.602

Length

1131 amino acids

Sequence
(BLAST)

0001: MPEAPRPPGT GGNVHRAWAP QRGDRRVRVF PPRPPPSPRR PLRAAADNGR RGEGGSSGGG AGARWNTGEE AGGRYARRGG VADRVVAGGA SADPAGAGRN
0101: AATVAAGGEA SPPRAREESG GGGRGGGVGS KRPSAPLAQL PPSKRSAVSA SRQFLPPASR WTAPAPAPLA GADADAGSRT RYEGDRENRG SDALKKPPVA
0201: RPLVARKDGV GVLSRAVPPN AAGTRVLKKP YARDGAAPGR HGPRAGMVKS SAAQDKGRGA GNEELWGKKV PVTATRLPPK PDVISDTRTS QPSRGKDGRF
0301: SSKVHRPLES GRVHGGLAVA KEMLAIDDDS SLADGRAVQI AVAARTGTSV GAVQKDGKLE KGEAPSKASW GSQVSSDAVH LDPAAYRDVS ARDSSGLSRN
0401: FGRKTPSWAV AKDVNVTNKY GESSSTYNTV AASFAKDPSK KTLMCKIVFE SGRMNRRTSS DVAGVSAEGN VLRSKDMFTN QNAVKPAKVV QKSVCGRRVT
0501: TNGIQDSIEL TKDRVMQAPM SPDMCPTIHK KKAATNRDFF GHKKMVKPKA VDHQQRKIAS TSVSGSKGKL DDEVASNLKF HDIFRDIVVH ERKLELYLNS
0601: SSGLPFVRCQ RQYRHRNADA RSRFKKLCRI FEFVCRTLVQ ITEQRSLKMR IDFLAAEVMK ALPDFTKHGP IVGQVPGVEV GDEFLYRSQL AIAGLHHHYR
0701: KGIDTTTYRN GMLIAISIVA SGGYPDELGC SGELLYTGSG GKPAGKKKDE DQKLKCGNLA LKNCIKTETP VRVIHGFKCR NTERGSHLGA KLVSRYTYDG
0801: LYLVVDFWMD GQPGSRVFKY KLKKIPGQPE LPMHVAKRLK SYKSRPGLFM NDISQGKEAT PICVINTVDD VRPAPFQYTT RIRYPFRLAE KHQGCDCTNG
0901: CSDSVSCACA VKNGGEIPFD LNGKILNEKS VIFECGPSCK CPPSCHNRVS QHDMKIPLEV FRTTKTGWGV RSLRSIPSGS FICEYIGELL HQKEAYKRRN
1001: NSYLFDTGLN YDDENISSGL PSNVSGLNSS SSCSQTKEDV HFTIDASEYG NIGRFINHSC SPNLQAQNVL QDHDDKRMPH IMFFAAETIP PLQELTCDYN
1101: NSEIDRVRGV NRRMKSKVCH CGSSQCHRRF Y

Best Arabidopsis Sequence Match ( AT2G22740.2 )
(BLAST)

001: MEMGVMENLM VHTEISKVKS QSNGEVEKRG VSVLENGGVC KLDRMSGLKF KRRKVFAVRD FPPGCGSRAM EVKIACENGN VVEDVKVVES LVKEEESLGQ
101: RDASENVSDI RMAEPVEVQP LRICLPGGDV VRDLSVTAGD ECSNSEQIVA GSGVSSSSGT ENIVRDIVVY ADESSLGMDN LDQTQPLEIE MSDVAVAKPR
201: LVAGRKKAKK GIACHSSLKV VSREFGEGSR KKKSKKNLYW RDRESLDSPE QLRILGVGTS SGSSSGDSSR NKVKETLRLF HGVCRKILQE DEAKPEDQRR
301: KGKGLRIDFE ASTILKRNGK FLNSGVHILG EVPGVEVGDE FQYRMELNIL GIHKPSQAGI DYMKYGKAKV ATSIVASGGY DDHLDNSDVL TYTGQGGNVM
401: QVKKKGEELK EPEDQKLITG NLALATSIEK QTPVRVIRGK HKSTHDKSKG GNYVYDGLYL VEKYWQQVGS HGMNVFKFQL RRIPGQPELS WVEVKKSKSK
501: YREGLCKLDI SEGKEQSPIS AVNEIDDEKP PLFTYTVKLI YPDWCRPVPP KSCCCTTRCT EAEARVCACV EKNGGEIPYN FDGAIVGAKP TIYECGPLCK
601: CPSSCYLRVT QHGIKLPLEI FKTKSRGWGV RCLKSIPIGS FICEYVGELL EDSEAERRIG NDEYLFDIGN RYDNSLAQGM SELMLGTQAG RSMAEGDESS
701: GFTIDAASKG NVGRFINHSC SPNLYAQNVL YDHEDSRIPH VMFFAQDNIP PLQELCYDYN YALDQVRDSK GNIKQKPCFC GAAVCRRRLY

Arabidopsis Description

SUVH6Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ17]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.