CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU80399	Sorghum	nucleus	26.11	57.72
EES13797	Sorghum	nucleus	47.78	53.23
TraesCS1A01G117300.1	Wheat	nucleus	38.49	51.21
Os08t0400200-00	Rice	nucleus	44.05	47.31
TraesCS1D01G118300.1	Wheat	nucleus, plastid	45.16	46.49
TraesCS1B01G137100.1	Wheat	nucleus, plastid	45.95	43.6
Os08t0400000-01	Rice	mitochondrion	31.43	42.72
HORVU1Hr1G025960.1	Barley	nucleus, plastid	45.79	41.69
Os08t0399300-00	Rice	nucleus	27.14	39.22
OQU80395	Sorghum	nucleus	18.25	38.79
EER96634	Sorghum	nucleus	34.44	34.83
EES19725	Sorghum	nucleus	16.43	30.71
OQU88147	Sorghum	nucleus	16.19	29.39
EES05802	Sorghum	nucleus	18.33	29.35
EES12588	Sorghum	nucleus	20.24	28.62
EES01635	Sorghum	nucleus	16.27	27.63
OQU77925	Sorghum	nucleus	16.35	27.32
EES14036	Sorghum	nucleus	14.21	26.88
EER96294	Sorghum	nucleus	14.84	26.34
OQU78645	Sorghum	nucleus	15.4	26.01
EES01534	Sorghum	nucleus	6.9	25.66
EER96081	Sorghum	nucleus	16.51	25.06
EES10399	Sorghum	nucleus	15.56	23.93
EES15150	Sorghum	nucleus	9.21	15.7
OQU85329	Sorghum	nucleus	7.86	14.6
EES13161	Sorghum	nucleus	8.89	14.21
KXG30908	Sorghum	nucleus	11.19	8.86

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.7	Gene3D:2.170.270.10	Gene3D:2.30.280.10	EntrezGene:8070040	UniProt:C5YKQ5
EnsemblPlants:EES13798	ProteinID:EES13798	ProteinID:EES13798.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005694
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008270	GO:GO:0009987
GO:GO:0016043	GO:GO:0016571	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0032259
GO:GO:0034968	GO:GO:0042393	InterPro:Hist-Lys_N-MeTrfase_plant	InterPro:IPR001214	InterPro:IPR003105	InterPro:IPR003616
InterPro:IPR007728	InterPro:IPR025794	InterPro:IPR036987	PFAM:PF00856	PFAM:PF02182	PFAM:PF05033
PFscan:PS50280	PFscan:PS50867	PFscan:PS50868	PFscan:PS51015	PFscan:PS51575	PANTHER:PTHR22884
PANTHER:PTHR22884:SF471	InterPro:PUA-like_sf	InterPro:Post-SET_dom	InterPro:Pre-SET_dom	InterPro:SET_dom	SMART:SM00317
SMART:SM00466	SMART:SM00468	EnsemblPlantsGene:SORBI_3007G121700	InterPro:SRA-YDG_sf	InterPro:SRA_YDG	SUPFAM:SSF82199
SUPFAM:SSF88697	UniParc:UPI0001A87F14	RefSeq:XP_002444303.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr7:+:52290228..52294010

Molecular Weight (calculated)

135114.0 Da

IEP (calculated)

8.347

GRAVY (calculated)

-0.324

Length

1260 amino acids

Sequence
(BLAST)

0001: MDSYAARLDV ARQPRLPVPG PAAGRVGRAC PPQRADHRGR PPASPRGCGG DTRRAGGLRE HGVVAAAVAA TAIAAGSVGD DAAAGVAAAM VAREETGGSE
0101: VGSKRCLPLA AAHPPPKRRA VSARRRFPPQ CGRNVAAPLA TANNASRFGD AGAEVCSAVL DLEKTAASSP LAGGKDGALL GAVSPVSAAT SLVKQLCAVD
0201: GDAPMADGGH HGPQPGVVKS SEALRRSGGT AVDGLLDGGS QGVAAVSMED RGKGAWSGEL GRKELVPDAH LQANPRMSLD ERSFPLGYGK DAVLSLLLAG
0301: GSSKVCLPLK SRPTDKLGVL EEAVVATHGC ISSVQGHYIK IVSNDGTVQD YELEDGEIPP ELVVQESQVS TGVALHESTD CRHGPSVPEV NAKETFAMQP
0401: CNEKTGGDTL QCGEKISSYL VANDVEVVNK SIGSSVNVVA ASLAEDLSKQ NMVGKRVSES AMMNIVDVTA GGCGNGTTMR CVTMHDSAAC RHGDSVPEIS
0501: AVETSVMQSS NEKTGGNILQ CGDKKSSCLV TKDIEVMNKS IRISCTAVAG PLAEDSFKQN LMGKRVSESA RMNRASDDVA AATSGNSIMM RSKVRFTPRK
0601: VIKLSKVIQK STLDTRHRHC PEDREKETEL SRRGIINKIE DTDKLTKDRV LQAPMTQEKE AATTRGFFGP RKRVKVKVPA HLQMKIASTC ALGCKVKLDD
0701: KVASSLDDDD ILKALVVNEG NLELFLNSYS SLTSARCQMK HGSQNADARS KFKMLCRRFE FVCRALVQAV EQNSLKIRRI DLQADRVIRK LPGFTKSGPI
0801: VGQVPGVQVG DEFLYRVQLA IVGLHLAYQG GIDTTIYRNG ERIAISIVAS GGYPDELSSS GELIYSGSGG KPAGKKDHED QKLERGNLAL KNCIKTKTPV
0901: RVIYGFKAQN NRVGSHSRAR EVSTFTYDGL YRVLDFWMDG QPGSRVFKYK LKKIPGQPKL PMHMAEGMRK SKTRPGLCEI DISQGKEGIP ICVINTVDTE
1001: RPAPFRYTTR IRYPFELTKK RHQGCDCTNG CSDSVSCACA VKNGGEIPFN LNGAIVNEKP LIFECGPSCK CPPSCQNKVS QHGLKIPLEV FKTTKTGWGV
1101: RSLRSISSGS FICEYVGELL YGNEADERRN SNFLFDIGLN HGDENFCNGL LSDVSDMKSS SSSSQILGDV GFTIDSAECG NIGRFINHSC SPNLYAQNVL
1201: WDHDDLRIPH IMFFAAETIP PLQELTYDYN YEIDHVEDVN GRIKFKVCQC GSSGCSGRLY

Best Arabidopsis Sequence Match ( AT2G35160.5 )
(BLAST)

001: MGRRKSKRFK VAAESEFSPD FGSITRQLRS RRMQKEFTVE TYETRNVSDV CVLSSQADVE LIPGEIVAER DSFKSVDCND MSVGLTEGAE SLGVNMQEPM
101: KDRNMPENTS EQNMVEVHPP SISLPEEDMM GSVCRKSITG TKELHGRTIS VGRDLSPNMG SKFSKNGKTA KRSISVEEEN LVLEKSDSGD HLGPSPEVLE
201: LEKSEVWIIT DKGVVMPSPV KPSEKRNGDY GEGSMRKNSE RVALDKKRLA SKFRLSNGGL PSCSSSGDSA RYKVKETMRL FHETCKKIMQ EEEARPRKRD
301: GGNFKVVCEA SKILKSKGKN LYSGTQIIGT VPGVEVGDEF QYRMELNLLG IHRPSQSGID YMKDDGGELV ATSIVSSGGY NDVLDNSDVL IYTGQGGNVG
401: KKKNNEPPKD QQLVTGNLAL KNSINKKNPV RVIRGIKNTT LQSSVVAKNY VYDGLYLVEE YWEETGSHGK LVFKFKLRRI PGQPELPWKE VAKSKKSEFR
501: DGLCNVDITE GKETLPICAV NNLDDEKPPP FIYTAKMIYP DWCRPIPPKS CGCTNGCSKS KNCACIVKNG GKIPYYDGAI VEIKPLVYEC GPHCKCPPSC
601: NMRVSQHGIK IKLEIFKTES RGWGVRSLES IPIGSFICEY AGELLEDKQA ESLTGKDEYL FDLGDEDDPF TINAAQKGNI GRFINHSCSP NLYAQDVLYD
701: HEEIRIPHIM FFALDNIPPL QELSYDYNYK IDQVYDSNGN IKKKFCYCGS AECSGRLY

Arabidopsis Description

SUVH5Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 [Source:UniProtKB/Swiss-Prot;Acc:O82175]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.