CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d047043_P001	Maize	nucleus	67.19	68.59
KXG35797	Sorghum	nucleus	38.24	44.01
GSMUA_Achr3P06790_001	Banana	cytosol	27.6	37.54
AT5G09540.1	Thale cress	nucleus	19.46	30.71
CDY21586	Canola	cytosol	19.68	30.1
CDY69792	Canola	cytosol	19.23	29.01
Bra009389.1-P	Field mustard	cytosol	19.23	29.01
GSMUA_Achr10P...	Banana	cytosol	27.6	28.98
EER92178	Sorghum	nucleus	24.43	26.8
KXG36712	Sorghum	cytosol	26.24	26.67
GSMUA_Achr1P21390_001	Banana	cytosol	23.3	25.56
CDY31322	Canola	cytosol	21.49	25.47
Bra031921.1-P	Field mustard	cytosol	20.81	24.93
KRH49811	Soybean	nucleus	25.34	23.78
Solyc07g007230.2.1	Tomato	nucleus	22.85	23.71
KRH42098	Soybean	nucleus	24.21	23.52
VIT_03s0017g00300.t01	Wine grape	nucleus	24.21	22.02
AT5G64360.7	Thale cress	nucleus	22.17	21.12
Bra024289.1-P	Field mustard	nucleus	21.27	20.48
KRH10601	Soybean	nucleus	22.85	20.32
CDX84519	Canola	nucleus	21.72	20.21
PGSC0003DMT400079004	Potato	cytosol	22.4	19.37
KRH21766	Soybean	nucleus	21.49	19.04
CDY58269	Canola	nucleus	21.27	18.73
Solyc11g006140.1.1	Tomato	nucleus	22.85	16.97
Solyc11g006170.1.1	Tomato	nucleus	23.3	15.87
PGSC0003DMT400073845	Potato	cytosol	23.3	15.8
CDY46799	Canola	nucleus	13.57	15.31
CDY45473	Canola	nucleus	24.89	14.71
CDY45966	Canola	nucleus	24.66	14.65
Bra027007.1-P	Field mustard	nucleus	24.66	14.61
Solyc01g105780.2.1	Tomato	nucleus	22.85	14.09
PGSC0003DMT400083794	Potato	nucleus	21.49	12.79
AT1G62970.1	Thale cress	nucleus	22.85	12.67

Protein Annotations

Gene3D:1.10.287.110	MapMan:35.2	EntrezGene:8056905	UniProt:C5YMM7	InterPro:DnaJ_domain	EnsemblPlants:EES14021
ProteinID:EES14021	ProteinID:EES14021.1	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	PFscan:PS50076	PANTHER:PTHR45496
EnsemblPlantsGene:SORBI_3007G159000	SUPFAM:SSF46565	unigene:Sbi.21011	UniParc:UPI0001A87ADD	RefSeq:XP_002444526.1	SEG:seg

Description

hypothetical protein

Coordinates

chr7:+:59365978..59375269

Molecular Weight (calculated)

46440.4 Da

IEP (calculated)

9.789

GRAVY (calculated)

-0.358

Length

442 amino acids

Sequence
(BLAST)

001: MDPAAAKRRE AERFMGIAEK LLTARDLEGC KQFVAQALSF DPRTPGADDL LAAADALLAD KRRRLPSGAL DPYAVLGLDS AVPASREPDV VHSQYRRLSF
101: LLNRSHPDRP CSLAFADAAR LVADAWAFLS DPLRKASLDS DLDAAAAATN AAAAAKAAAA AAARVPTAPH PEKQHQQQLS PPPPPALQPP QTVSGTPPKR
201: GRPLRAAKTP ATPPVPQPPQ TVSATPPAQQ PPQTMSSTQP PKRGRPPRAA KTPPETEGNQ EGEALQAPAF WTVCPSCCRL HQYDRSYESQ TLLCPSCRRP
301: FVATAMSTPP PIVPGTDMYY CSWGFFPMGF PGGPAFAAPL NSPQHQAPDA LGFYPMGPYL PLPGPSGIVE VEGNKAVDAG TVIPVTPTVA VASPSPAPAP
401: APAPSPVLTA ATPVKSSHVK VGAKKRGRPK GSKNKKVVIE IN

Best Arabidopsis Sequence Match ( AT2G01710.1 )
(BLAST)

001: MGDNNPNRSE AERLLGIAEK LLESRDLNGS KEFAILAQET EPLLEGTDQI LAVVDVLLSS APENRIKNQP NWYKILQIED LTESSTDNDL IKKQYRRLAL
101: LLHPDKNRFP FADQAFRFVL DAWEVLSTPT KKSQFDGDLN LIFTKVNLNT QKSKKKTTTN EKMSTFWTAC PYCYSLHEYP RVYQEYCIRC QNCQRAFHAA
201: SIPQLPPLIP GKDEYYCCWG FFPMGFVGGK GGEAAIANGV DAAKFPNWMP PVFSSGGVAA PPSGNGVSFD GWSGGAAKRD NEAVRSNNGV GVNSDGTPKK
301: RGRGRPKKNP V

Arabidopsis Description

Chaperone DnaJ-domain superfamily protein [Source:TAIR;Acc:AT2G01710]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.