CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d031858_P001	Maize	nucleus	83.78	85.58
Os08t0565700-01	Rice	nucleus	58.86	65.99
TraesCS1A01G042900.1	Wheat	nucleus	59.76	61.61
HORVU1Hr1G008690.1	Barley	nucleus	55.56	61.26
TraesCS1B01G055800.1	Wheat	nucleus	58.71	61.0
TraesCS1D01G043400.1	Wheat	nucleus	58.56	60.94
TraesCS3A01G457800.1	Wheat	mitochondrion, nucleus	46.85	58.76
TraesCS4D01G204500.1	Wheat	nucleus	54.95	53.9
TraesCS4B01G203900.1	Wheat	nucleus	54.5	53.62
TraesCS4A01G100900.1	Wheat	nucleus	54.05	53.57
TraesCS3B01G498000.1	Wheat	nucleus	51.35	53.19
TraesCS3D01G450600.1	Wheat	nucleus	54.05	53.02
TraesCS3A01G457900.1	Wheat	plastid	42.34	52.13
TraesCS3B01G498100.1	Wheat	nucleus	48.65	51.51
TraesCS3D01G450700.1	Wheat	nucleus	48.5	46.21
EER96294	Sorghum	nucleus	40.39	37.89
OQU80399	Sorghum	nucleus	24.17	28.25
EES19725	Sorghum	nucleus	28.08	27.74
EES01635	Sorghum	nucleus	29.13	26.15
OQU78645	Sorghum	nucleus	28.53	25.47
OQU88147	Sorghum	nucleus	25.98	24.93
EER96081	Sorghum	nucleus	29.58	23.73
OQU77925	Sorghum	nucleus	26.58	23.47
EES10399	Sorghum	nucleus	28.38	23.08
EES01534	Sorghum	nucleus	11.11	21.83
EES05802	Sorghum	nucleus	22.67	19.19
EES12588	Sorghum	nucleus	24.77	18.52
EES13797	Sorghum	nucleus	26.43	15.56
OQU80395	Sorghum	nucleus	13.36	15.01
EER96634	Sorghum	nucleus	27.78	14.85
EES13798	Sorghum	nucleus	26.88	14.21
OQU85329	Sorghum	nucleus	13.81	13.57
EES15150	Sorghum	nucleus	14.86	13.4
EES13161	Sorghum	nucleus	14.26	12.06
KRH67447	Soybean	nucleus	13.06	12.0
KXG30908	Sorghum	nucleus	16.97	7.1
KRH67444	Soybean	cytosol	0.0	0.0
CDY18235	Canola	mitochondrion	0.0	0.0

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.7	MapMan:12.5.1.1	Gene3D:2.170.270.10	Gene3D:2.30.280.10	EntrezGene:8054815
UniProt:C5YMQ8	EnsemblPlants:EES14036	ProteinID:EES14036	ProteinID:EES14036.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005694	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009987
GO:GO:0016043	GO:GO:0016571	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0034968
GO:GO:0042393	InterPro:Hist-Lys_N-MeTrfase_plant	InterPro:IPR001214	InterPro:IPR003105	InterPro:IPR007728	InterPro:IPR025794
InterPro:IPR036987	PFAM:PF00856	PFAM:PF02182	PFAM:PF05033	PFscan:PS50280	PFscan:PS50867
PFscan:PS51015	PFscan:PS51575	PANTHER:PTHR22884	PANTHER:PTHR22884:SF328	InterPro:PUA-like_sf	InterPro:Pre-SET_dom
InterPro:SET_dom	SMART:SM00317	SMART:SM00466	SMART:SM00468	EnsemblPlantsGene:SORBI_3007G162500	InterPro:SRA-YDG_sf
InterPro:SRA_YDG	SUPFAM:SSF101447	SUPFAM:SSF82199	SUPFAM:SSF88697	UniParc:UPI0001A87B40	RefSeq:XP_002444541.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:59660820..59664676

Molecular Weight (calculated)

73368.7 Da

IEP (calculated)

7.921

GRAVY (calculated)

-0.378

Length

666 amino acids

Sequence
(BLAST)

001: METSPPPPPP PPPPPQIDHL LSQFPIIPKP DPDGPTPAQT PAPIAERSAA LMLALTPELC QVLHRELAPS PDDDPYFARC LRQSQLHLEA LAASLRPPSS
101: SSSSSSAAAA AASLARVLPP PPPPQKELRT QLQREPGAGG GSNPSSSKKR ARASTEVVRA THLSPADHLR YRALVRRARL TFEALRSTYQ RQETSSGVRN
201: RHDLRASRQM LSAGHWLHRE VRIVGDIPGV FVGDAFYYRA EICVVGLHTM PQAGIGYIPG SLLNEGDPVA TSIVSSGGYL DDEDTGDVLV YTGSGGRQRN
301: RVDHHANQTL ERGNLALHNS YLYGVEVRVI RGHDIDQGPH RKVYVYDGLY RVIESTFGPG KSGHDVCKFK LVRLPGQDDL ASKTWHTAKL LKESMDARIR
401: PPRYISLDLS KGAELLRVPV CNKVDNDRSP LLFEYIAQPE FPVRPAHVPV KQHGGCHCAG GCGSKCRCER KNGGEPVYTE DDILVMGRPV VYECGALCGC
501: PMTCVNRVTQ RGMKHRLEVF RSIETGWGVR ALDLIQPGAF VCEYTGHVVV MDDQPGSALE GRSIIDPRRF PERWKEWGDA SAVEPNMKRL QFAKFAGPGY
601: VLDVSHKRNV ACYISHSCTP NVFLQFVLRG NEDESFPHLM VFAMETIPPM RELSIDYGID MELSAI

Best Arabidopsis Sequence Match ( AT4G13460.1 )
(BLAST)

001: MGSSHIPLDP SLNPSPSLIP KLEPVTESTQ NLAFQLPNTN PQALISSAVS DFNEATDFSS DYNTVAESAR SAFAQRLQRH DDVAVLDSLT GAIVPVEENP
101: EPEPNPYSTS DSSPSVATQR PRPQPRSSEL VRITDVGPES ERQFREHVRK TRMIYDSLRM FLMMEEAKRN GVGGRRARAD GKAGKAGSMM RDCMLWMNRD
201: KRIVGSIPGV QVGDIFFFRF ELCVMGLHGH PQSGIDFLTG SLSSNGEPIA TSVIVSGGYE DDDDQGDVIM YTGQGGQDRL GRQAEHQRLE GGNLAMERSM
301: YYGIEVRVIR GLKYENEVSS RVYVYDGLFR IVDSWFDVGK SGFGVFKYRL ERIEGQAEMG SSVLKFARTL KTNPLSVRPR GYINFDISNG KENVPVYLFN
401: DIDSDQEPLY YEYLAQTSFP PGLFVQQSGN ASGCDCVNGC GSGCLCEAKN SGEIAYDYNG TLIRQKPLIH ECGSACQCPP SCRNRVTQKG LRNRLEVFRS
501: LETGWGVRSL DVLHAGAFIC EYAGVALTRE QANILTMNGD TLVYPARFSS ARWEDWGDLS QVLADFERPS YPDIPPVDFA MDVSKMRNVA CYISHSTDPN
601: VIVQFVLHDH NSLMFPRVML FAAENIPPMT ELSLDYGVVD DWNAKLAICN

Arabidopsis Description

SUVH9Histone-lysine N-methyltransferase family member SUVH9 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0G7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.